RNA–Protein interactions for RNA: ENST00000599839.5

CALM3-212, Transcript of calmodulin 3, humanhuman

TSL 1 (best) BASIC

Gene CALM3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-212ENST00000599839 UPF1Q92900 1129 aaKnown RBP eCLIP21.23■□□□□ 0.991e-21■■■■■ 42.5
CALM3-212ENST00000599839 KDRP35968 1356 aa21.22■□□□□ 0.99
CALM3-212ENST00000599839 RAPGEF4Q8WZA2 1011 aa21.22■□□□□ 0.99
CALM3-212ENST00000599839 TOGARAM1Q9Y4F4 1720 aa21.21■□□□□ 0.99
CALM3-212ENST00000599839 NHSQ6T4R5 1651 aa21.2■□□□□ 0.98
CALM3-212ENST00000599839 MYBBP1AQ9BQG0 1328 aaKnown RBP21.2■□□□□ 0.98
CALM3-212ENST00000599839 TATP17735 454 aaPredicted RBP21.2■□□□□ 0.98
CALM3-212ENST00000599839 SULT6B1Q6IMI4 303 aa21.2■□□□□ 0.98
CALM3-212ENST00000599839 HMOX1P09601 288 aa21.19■□□□□ 0.98
CALM3-212ENST00000599839 ZCRB1Q8TBF4 217 aaKnown RBP21.18■□□□□ 0.98
CALM3-212ENST00000599839 CFAP53Q96M91 514 aa21.18■□□□□ 0.98
CALM3-212ENST00000599839 VIRMAQ69YN4 1812 aaKnown RBP21.18■□□□□ 0.98
CALM3-212ENST00000599839 DDX54Q8TDD1 881 aaKnown RBP21.17■□□□□ 0.98
CALM3-212ENST00000599839 BCL9O00512 1426 aa21.16■□□□□ 0.98
CALM3-212ENST00000599839 U2SURPO15042 1029 aaKnown RBP21.16■□□□□ 0.98
CALM3-212ENST00000599839 FAM196AQ6ZSG2 479 aa21.16■□□□□ 0.98
CALM3-212ENST00000599839 KAT6BQ8WYB5 2073 aa21.16■□□□□ 0.98
CALM3-212ENST00000599839 PTF1AQ7RTS3 328 aa21.15■□□□□ 0.98
CALM3-212ENST00000599839 BTAF1O14981 1849 aa21.14■□□□□ 0.98
CALM3-212ENST00000599839 ITGB4P16144 1822 aa21.14■□□□□ 0.98
CALM3-212ENST00000599839 CYP27B1O15528 508 aa21.14■□□□□ 0.98
CALM3-212ENST00000599839 PCDH11XQ9BZA7 1347 aa21.14■□□□□ 0.97
CALM3-212ENST00000599839 PCDH11YQ9BZA8 1340 aa21.14■□□□□ 0.97
CALM3-212ENST00000599839 TRIM37O94972 964 aa21.13■□□□□ 0.97
CALM3-212ENST00000599839 PLEKHG2Q9H7P9 1386 aa21.13■□□□□ 0.97
CALM3-212ENST00000599839 ACSBG1Q96GR2 724 aa21.1■□□□□ 0.97
CALM3-212ENST00000599839 KCNQ2O43526 872 aa21.1■□□□□ 0.97
CALM3-212ENST00000599839 RSPH6AQ9H0K4 717 aa21.1■□□□□ 0.97
CALM3-212ENST00000599839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.1■□□□□ 0.97
CALM3-212ENST00000599839 SPG7Q9UQ90 795 aa21.1■□□□□ 0.97
CALM3-212ENST00000599839 SCN11AQ9UI33 1791 aa21.09■□□□□ 0.97
CALM3-212ENST00000599839 U2AF1L5P0DN76 240 aaPredicted RBP21.09■□□□□ 0.97
CALM3-212ENST00000599839 U2AF1Q01081 240 aaKnown RBP eCLIP21.09■□□□□ 0.97
CALM3-212ENST00000599839 CCDC184Q52MB2 194 aa21.09■□□□□ 0.97
CALM3-212ENST00000599839 RGPD3A6NKT7 1758 aaPredicted RBP21.08■□□□□ 0.97
CALM3-212ENST00000599839 RGPD4Q7Z3J3 1758 aa21.08■□□□□ 0.97
CALM3-212ENST00000599839 PHKG2P15735 406 aa21.08■□□□□ 0.96
CALM3-212ENST00000599839 DEFB132Q7Z7B7 95 aa21.08■□□□□ 0.96
CALM3-212ENST00000599839 NUDCQ9Y266 331 aa21.08■□□□□ 0.96
CALM3-212ENST00000599839 RREB1Q92766 1687 aa21.08■□□□□ 0.96
CALM3-212ENST00000599839 DLG5Q8TDM6 1919 aa21.07■□□□□ 0.96
CALM3-212ENST00000599839 KDM6AO15550 1401 aaPredicted RBP21.07■□□□□ 0.96
CALM3-212ENST00000599839 ADAMTS7Q9UKP4 1686 aa21.06■□□□□ 0.96
CALM3-212ENST00000599839 ANP32CO43423 234 aa21.06■□□□□ 0.96
CALM3-212ENST00000599839 PRKAR2BP31323 418 aa21.06■□□□□ 0.96
CALM3-212ENST00000599839 PLEKHO1Q53GL0 409 aaPredicted RBP21.06■□□□□ 0.96
CALM3-212ENST00000599839 MTHFSDQ2M296 383 aaKnown RBP21.05■□□□□ 0.96
CALM3-212ENST00000599839 AMOTQ4VCS5 1084 aa21.05■□□□□ 0.96
CALM3-212ENST00000599839 ZNF530Q6P9A1 599 aaPredicted RBP21.05■□□□□ 0.96
CALM3-212ENST00000599839 CCDC125Q86Z20 511 aa21.05■□□□□ 0.96
CALM3-212ENST00000599839 NUP188Q5SRE5 1749 aa21.04■□□□□ 0.96
CALM3-212ENST00000599839 IFNL2Q8IZJ0 200 aa21.04■□□□□ 0.96
CALM3-212ENST00000599839 PHACTR3Q96KR7 559 aa21.04■□□□□ 0.96
CALM3-212ENST00000599839 BCL11BQ9C0K0 894 aaPredicted RBP21.04■□□□□ 0.96
CALM3-212ENST00000599839 NKX1-1Q15270 411 aaPredicted RBP21.03■□□□□ 0.96
CALM3-212ENST00000599839 PRIM1P49642 420 aaKnown RBP21.02■□□□□ 0.96
CALM3-212ENST00000599839 SF3B2Q13435 895 aaKnown RBP21.02■□□□□ 0.96
CALM3-212ENST00000599839 LY75O60449 1722 aa21.02■□□□□ 0.96
CALM3-212ENST00000599839 APBA3O96018 575 aa21.01■□□□□ 0.95
CALM3-212ENST00000599839 EN1Q05925 392 aaPredicted RBP21.01■□□□□ 0.95
CALM3-212ENST00000599839 FCHSD2O94868 740 aa21■□□□□ 0.95
CALM3-212ENST00000599839 SYTL4Q96C24 671 aaPredicted RBP21■□□□□ 0.95
CALM3-212ENST00000599839 PLEKHF1Q96S99 279 aa20.99■□□□□ 0.95
CALM3-212ENST00000599839 SIPA1L3O60292 1781 aaPredicted RBP20.99■□□□□ 0.95
CALM3-212ENST00000599839 BAG6P46379 1132 aa20.98■□□□□ 0.95
CALM3-212ENST00000599839 EZH2Q15910 746 aaKnown RBP20.98■□□□□ 0.95
CALM3-212ENST00000599839 MPRIPQ6WCQ1 1025 aa20.98■□□□□ 0.95
CALM3-212ENST00000599839 C1orf141Q5JVX7 400 aa20.97■□□□□ 0.95
CALM3-212ENST00000599839 MRC1P22897 1456 aa20.97■□□□□ 0.95
CALM3-212ENST00000599839 AKAP4Q5JQC9 854 aa20.97■□□□□ 0.95
CALM3-212ENST00000599839 CAMKK2Q96RR4 588 aa20.97■□□□□ 0.95
CALM3-212ENST00000599839 PAPPAQ13219 1627 aa20.96■□□□□ 0.95
CALM3-212ENST00000599839 MAP3K5Q99683 1374 aa20.95■□□□□ 0.94
CALM3-212ENST00000599839 DCAF5Q96JK2 942 aa20.95■□□□□ 0.94
CALM3-212ENST00000599839 ADAMTS8Q9UP79 889 aa20.95■□□□□ 0.94
CALM3-212ENST00000599839 HSP90AB1P08238 724 aaKnown RBP20.94■□□□□ 0.94
CALM3-212ENST00000599839 WDR43Q15061 677 aaKnown RBP eCLIP20.94■□□□□ 0.94
CALM3-212ENST00000599839 CCDC146Q8IYE0 955 aa20.94■□□□□ 0.94
CALM3-212ENST00000599839 GAS2L2Q8NHY3 880 aa20.94■□□□□ 0.94
CALM3-212ENST00000599839 LGR6Q9HBX8 967 aa20.94■□□□□ 0.94
CALM3-212ENST00000599839 MRS2Q9HD23 443 aa20.94■□□□□ 0.94
CALM3-212ENST00000599839 PIGBQ92521 554 aa20.93■□□□□ 0.94
CALM3-212ENST00000599839 PLSCR1O15162 318 aa20.92■□□□□ 0.94
CALM3-212ENST00000599839 PROM2Q8N271 834 aa20.92■□□□□ 0.94
CALM3-212ENST00000599839 TAF1LQ8IZX4 1826 aa20.92■□□□□ 0.94
CALM3-212ENST00000599839 RNMTO43148 476 aaKnown RBP20.91■□□□□ 0.94
CALM3-212ENST00000599839 GNAT3A8MTJ3 354 aa20.9■□□□□ 0.94
CALM3-212ENST00000599839 ERVV-2B6SEH9 535 aa20.9■□□□□ 0.94
CALM3-212ENST00000599839 DIEXFQ68CQ4 756 aaKnown RBP20.9■□□□□ 0.94
CALM3-212ENST00000599839 TMOD3Q9NYL9 352 aa20.9■□□□□ 0.94
CALM3-212ENST00000599839 C5P01031 1676 aa20.9■□□□□ 0.94
CALM3-212ENST00000599839 IL17REQ8NFR9 667 aa20.89■□□□□ 0.93
CALM3-212ENST00000599839 PNISRQ8TF01 805 aaKnown RBP20.89■□□□□ 0.93
CALM3-212ENST00000599839 MAPK8IP3Q9UPT6 1336 aa20.89■□□□□ 0.93
CALM3-212ENST00000599839 UBR2Q8IWV8 1755 aa20.89■□□□□ 0.93
CALM3-212ENST00000599839 PALLDQ8WX93 1383 aa20.89■□□□□ 0.93
CALM3-212ENST00000599839 TXNRD1Q16881 649 aa20.88■□□□□ 0.93
CALM3-212ENST00000599839 CEMIPQ8WUJ3 1361 aa20.88■□□□□ 0.93
CALM3-212ENST00000599839 KCNQ4P56696 695 aa20.87■□□□□ 0.93
CALM3-212ENST00000599839 CABP4P57796 275 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms