RNA–Protein interactions for RNA: ENST00000599825.2

LSP1P1-201, Transcript of LSP1 pseudogene 1, humanhuman

BASIC

Gene LSP1P1, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P1-201ENST00000599825 PTGER2P43116 358 aa14.15□□□□□ -0.14
LSP1P1-201ENST00000599825 NBPF6Q5VWK0 638 aa14.15□□□□□ -0.14
LSP1P1-201ENST00000599825 ZCRB1Q8TBF4 217 aaKnown RBP14.15□□□□□ -0.14
LSP1P1-201ENST00000599825 NBPF4Q96M43 638 aa14.15□□□□□ -0.14
LSP1P1-201ENST00000599825 SHANK3Q9BYB0 1731 aa14.15□□□□□ -0.14
LSP1P1-201ENST00000599825 PAPPAQ13219 1627 aa14.15□□□□□ -0.14
LSP1P1-201ENST00000599825 RTL1A6NKG5 1358 aa14.14□□□□□ -0.15
LSP1P1-201ENST00000599825 SLC24A1O60721 1099 aa14.14□□□□□ -0.15
LSP1P1-201ENST00000599825 HSP90AB2PQ58FF8 381 aa14.14□□□□□ -0.15
LSP1P1-201ENST00000599825 RAPGEF4Q8WZA2 1011 aa14.14□□□□□ -0.15
LSP1P1-201ENST00000599825 FHDC1Q9C0D6 1143 aaPredicted RBP14.14□□□□□ -0.15
LSP1P1-201ENST00000599825 EMILIN1Q9Y6C2 1016 aa14.14□□□□□ -0.15
LSP1P1-201ENST00000599825 MSH5O43196 834 aa14.13□□□□□ -0.15
LSP1P1-201ENST00000599825 CDCA8Q53HL2 280 aa14.13□□□□□ -0.15
LSP1P1-201ENST00000599825 MTFR1LQ9H019 292 aa14.13□□□□□ -0.15
LSP1P1-201ENST00000599825 TATP17735 454 aaPredicted RBP14.12□□□□□ -0.15
LSP1P1-201ENST00000599825 TNNT2P45379 298 aaPredicted RBP14.12□□□□□ -0.15
LSP1P1-201ENST00000599825 PELP1Q8IZL8 1130 aaKnown RBP14.11□□□□□ -0.15
LSP1P1-201ENST00000599825 CARD14Q9BXL6 1004 aa14.11□□□□□ -0.15
LSP1P1-201ENST00000599825 TFCP2L1Q9NZI6 479 aa14.11□□□□□ -0.15
LSP1P1-201ENST00000599825 NSD2O96028 1365 aa14.1□□□□□ -0.15
LSP1P1-201ENST00000599825 FLT4P35916 1363 aa14.1□□□□□ -0.15
LSP1P1-201ENST00000599825 CCNL1Q9UK58 526 aaPredicted RBP14.1□□□□□ -0.15
LSP1P1-201ENST00000599825 ARXQ96QS3 562 aa14.09□□□□□ -0.15
LSP1P1-201ENST00000599825 INSRP06213 1382 aa14.09□□□□□ -0.15
LSP1P1-201ENST00000599825 TUBGCP6Q96RT7 1819 aa14.08□□□□□ -0.15
LSP1P1-201ENST00000599825 AKT1S1Q96B36 256 aa14.08□□□□□ -0.16
LSP1P1-201ENST00000599825 SYT17Q9BSW7 474 aa14.08□□□□□ -0.16
LSP1P1-201ENST00000599825 PNPLA7Q6ZV29 1317 aa14.08□□□□□ -0.16
LSP1P1-201ENST00000599825 SLC27A3Q5K4L6 730 aa14.07□□□□□ -0.16
LSP1P1-201ENST00000599825 MSL1Q68DK7 614 aa14.07□□□□□ -0.16
LSP1P1-201ENST00000599825 MPRIPQ6WCQ1 1025 aa14.07□□□□□ -0.16
LSP1P1-201ENST00000599825 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
LSP1P1-201ENST00000599825 PCDH11XQ9BZA7 1347 aa14.07□□□□□ -0.16
LSP1P1-201ENST00000599825 PCDH11YQ9BZA8 1340 aa14.07□□□□□ -0.16
LSP1P1-201ENST00000599825 POLD1P28340 1107 aa14.06□□□□□ -0.16
LSP1P1-201ENST00000599825 LY75O60449 1722 aa14.05□□□□□ -0.16
LSP1P1-201ENST00000599825 SGIP1Q9BQI5 828 aa14.05□□□□□ -0.16
LSP1P1-201ENST00000599825 CGNL1Q0VF96 1302 aa14.05□□□□□ -0.16
LSP1P1-201ENST00000599825 TOGARAM1Q9Y4F4 1720 aa14.04□□□□□ -0.16
LSP1P1-201ENST00000599825 HSPA5P11021 654 aaKnown RBP14.04□□□□□ -0.16
LSP1P1-201ENST00000599825 PALLDQ8WX93 1383 aa14.04□□□□□ -0.16
LSP1P1-201ENST00000599825 CYP27B1O15528 508 aa14.03□□□□□ -0.16
LSP1P1-201ENST00000599825 GPR162Q16538 588 aa14.03□□□□□ -0.16
LSP1P1-201ENST00000599825 C5P01031 1676 aa14.03□□□□□ -0.16
LSP1P1-201ENST00000599825 PHF14O94880 888 aa14.02□□□□□ -0.17
LSP1P1-201ENST00000599825 SMIM5Q71RC9 77 aa14.02□□□□□ -0.17
LSP1P1-201ENST00000599825 EIF4G2P78344 907 aaKnown RBP eCLIP14.01□□□□□ -0.17
LSP1P1-201ENST00000599825 COL23A1Q86Y22 540 aaPredicted RBP14.01□□□□□ -0.17
LSP1P1-201ENST00000599825 NLGN2Q8NFZ4 835 aa14.01□□□□□ -0.17
LSP1P1-201ENST00000599825 QSER1Q2KHR3 1735 aa14.01□□□□□ -0.17
LSP1P1-201ENST00000599825 PKD1L3Q7Z443 1732 aa14.01□□□□□ -0.17
LSP1P1-201ENST00000599825 KIF24Q5T7B8 1368 aa14□□□□□ -0.17
LSP1P1-201ENST00000599825 MAP2P11137 1827 aaKnown RBP14□□□□□ -0.17
LSP1P1-201ENST00000599825 EYA1Q99502 592 aa14□□□□□ -0.17
LSP1P1-201ENST00000599825 WWC3Q9ULE0 1092 aa14□□□□□ -0.17
LSP1P1-201ENST00000599825 TIMELESSQ9UNS1 1208 aa14□□□□□ -0.17
LSP1P1-201ENST00000599825 SPG7Q9UQ90 795 aa14□□□□□ -0.17
LSP1P1-201ENST00000599825 ANKRD26Q9UPS8 1709 aa14□□□□□ -0.17
LSP1P1-201ENST00000599825 ITGB4P16144 1822 aa13.99□□□□□ -0.17
LSP1P1-201ENST00000599825 AK7Q96M32 723 aa13.99□□□□□ -0.17
LSP1P1-201ENST00000599825 PANK3Q9H999 370 aa13.99□□□□□ -0.17
LSP1P1-201ENST00000599825 POLKQ9UBT6 870 aa13.99□□□□□ -0.17
LSP1P1-201ENST00000599825 WASHC2AQ641Q2 1341 aa13.98□□□□□ -0.17
LSP1P1-201ENST00000599825 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
LSP1P1-201ENST00000599825 CNGB1Q14028 1251 aaPredicted RBP13.98□□□□□ -0.17
LSP1P1-201ENST00000599825 EIF4A2Q14240 407 aaKnown RBP13.98□□□□□ -0.17
LSP1P1-201ENST00000599825 SLC16A10Q8TF71 515 aa13.98□□□□□ -0.17
LSP1P1-201ENST00000599825 PIGBQ92521 554 aa13.97□□□□□ -0.17
LSP1P1-201ENST00000599825 TMOD3Q9NYL9 352 aa13.97□□□□□ -0.17
LSP1P1-201ENST00000599825 C4BP0C0L5 1744 aa13.96□□□□□ -0.17
LSP1P1-201ENST00000599825 ZNF784Q8NCA9 323 aaPredicted RBP13.96□□□□□ -0.17
LSP1P1-201ENST00000599825 TAF1LQ8IZX4 1826 aa13.95□□□□□ -0.18
LSP1P1-201ENST00000599825 AMIGO3Q86WK7 504 aa13.95□□□□□ -0.18
LSP1P1-201ENST00000599825 SMARCC1Q92922 1105 aaPredicted RBP13.95□□□□□ -0.18
LSP1P1-201ENST00000599825 MAP3K5Q99683 1374 aa13.95□□□□□ -0.18
LSP1P1-201ENST00000599825 UTRNP46939 3433 aa13.95□□□□□ -0.18
LSP1P1-201ENST00000599825 PHKG2P15735 406 aa13.94□□□□□ -0.18
LSP1P1-201ENST00000599825 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
LSP1P1-201ENST00000599825 IFNL2Q8IZJ0 200 aa13.94□□□□□ -0.18
LSP1P1-201ENST00000599825 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
LSP1P1-201ENST00000599825 ASAP1Q9ULH1 1129 aa13.94□□□□□ -0.18
LSP1P1-201ENST00000599825 NCAPD2Q15021 1401 aa13.93□□□□□ -0.18
LSP1P1-201ENST00000599825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.92□□□□□ -0.18
LSP1P1-201ENST00000599825 LOC102724428A0A0B4J2F2 783 aa13.92□□□□□ -0.18
LSP1P1-201ENST00000599825 GNPATO15228 680 aa13.92□□□□□ -0.18
LSP1P1-201ENST00000599825 ATP6V1AP38606 617 aa13.92□□□□□ -0.18
LSP1P1-201ENST00000599825 SIK1P57059 783 aa13.92□□□□□ -0.18
LSP1P1-201ENST00000599825 AEBP1Q8IUX7 1158 aa13.92□□□□□ -0.18
LSP1P1-201ENST00000599825 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
LSP1P1-201ENST00000599825 COL24A1Q17RW2 1714 aa13.92□□□□□ -0.18
LSP1P1-201ENST00000599825 YBX3P16989 372 aaKnown RBP eCLIP13.91□□□□□ -0.18
LSP1P1-201ENST00000599825 ITPK1Q13572 414 aa13.91□□□□□ -0.18
LSP1P1-201ENST00000599825 ZNF530Q6P9A1 599 aaPredicted RBP13.91□□□□□ -0.18
LSP1P1-201ENST00000599825 CHD4Q14839 1912 aa13.91□□□□□ -0.18
LSP1P1-201ENST00000599825 NKX1-1Q15270 411 aaPredicted RBP13.9□□□□□ -0.18
LSP1P1-201ENST00000599825 KNSTRNQ9Y448 316 aa13.9□□□□□ -0.18
LSP1P1-201ENST00000599825 IGSF1Q8N6C5 1336 aa13.9□□□□□ -0.19
LSP1P1-201ENST00000599825 UBR3Q6ZT12 1888 aa13.89□□□□□ -0.19
LSP1P1-201ENST00000599825 FLAD1Q8NFF5 587 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms