RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 NBPF4Q96M43 638 aa19.68■□□□□ 0.74
IRF3-224ENST00000599680 TNNT2P45379 298 aaPredicted RBP19.67■□□□□ 0.74
IRF3-224ENST00000599680 NSD2O96028 1365 aa19.67■□□□□ 0.74
IRF3-224ENST00000599680 KCNQ2O43526 872 aa19.66■□□□□ 0.74
IRF3-224ENST00000599680 ZCRB1Q8TBF4 217 aaKnown RBP19.66■□□□□ 0.74
IRF3-224ENST00000599680 TATP17735 454 aaPredicted RBP19.65■□□□□ 0.74
IRF3-224ENST00000599680 KNSTRNQ9Y448 316 aa19.64■□□□□ 0.73
IRF3-224ENST00000599680 PKD1L3Q7Z443 1732 aa19.64■□□□□ 0.73
IRF3-224ENST00000599680 KIF7Q2M1P5 1343 aa19.62■□□□□ 0.73
IRF3-224ENST00000599680 WASHC2AQ641Q2 1341 aa19.62■□□□□ 0.73
IRF3-224ENST00000599680 SYTL4Q96C24 671 aaPredicted RBP19.62■□□□□ 0.73
IRF3-224ENST00000599680 TXNRD1Q16881 649 aa19.61■□□□□ 0.73
IRF3-224ENST00000599680 MORC1Q86VD1 984 aa19.61■□□□□ 0.73
IRF3-224ENST00000599680 POLKQ9UBT6 870 aa19.61■□□□□ 0.73
IRF3-224ENST00000599680 SRCAPQ6ZRS2 3230 aa19.61■□□□□ 0.73
IRF3-224ENST00000599680 ITGB4P16144 1822 aa19.6■□□□□ 0.73
IRF3-224ENST00000599680 PCDH11XQ9BZA7 1347 aa19.59■□□□□ 0.73
IRF3-224ENST00000599680 PCDH11YQ9BZA8 1340 aa19.59■□□□□ 0.73
IRF3-224ENST00000599680 LY75O60449 1722 aa19.59■□□□□ 0.73
IRF3-224ENST00000599680 CASZ1Q86V15 1759 aa19.58■□□□□ 0.73
IRF3-224ENST00000599680 PROM2Q8N271 834 aa19.58■□□□□ 0.72
IRF3-224ENST00000599680 STK32BQ9NY57 414 aa19.58■□□□□ 0.72
IRF3-224ENST00000599680 PRIM1P49642 420 aaKnown RBP19.56■□□□□ 0.72
IRF3-224ENST00000599680 ANO8Q9HCE9 1232 aaPredicted RBP19.56■□□□□ 0.72
IRF3-224ENST00000599680 NCAPD2Q15021 1401 aa19.56■□□□□ 0.72
IRF3-224ENST00000599680 EYA1Q99502 592 aa19.55■□□□□ 0.72
IRF3-224ENST00000599680 PAPPAQ13219 1627 aa19.54■□□□□ 0.72
IRF3-224ENST00000599680 TOGARAM1Q9Y4F4 1720 aa19.54■□□□□ 0.72
IRF3-224ENST00000599680 EIF4A2Q14240 407 aaKnown RBP19.54■□□□□ 0.72
IRF3-224ENST00000599680 SPG7Q9UQ90 795 aa19.54■□□□□ 0.72
IRF3-224ENST00000599680 QSER1Q2KHR3 1735 aa19.53■□□□□ 0.72
IRF3-224ENST00000599680 SLC15A2Q16348 729 aa19.52■□□□□ 0.72
IRF3-224ENST00000599680 SPON1Q9HCB6 807 aa19.52■□□□□ 0.72
IRF3-224ENST00000599680 TUBGCP6Q96RT7 1819 aa19.51■□□□□ 0.71
IRF3-224ENST00000599680 SLC27A3Q5K4L6 730 aa19.5■□□□□ 0.71
IRF3-224ENST00000599680 PPP1R1BQ9UD71 204 aaPredicted RBP19.5■□□□□ 0.71
IRF3-224ENST00000599680 C5P01031 1676 aa19.49■□□□□ 0.71
IRF3-224ENST00000599680 CYP27B1O15528 508 aa19.49■□□□□ 0.71
IRF3-224ENST00000599680 AMER1Q5JTC6 1135 aaPredicted RBP19.49■□□□□ 0.71
IRF3-224ENST00000599680 TAF1LQ8IZX4 1826 aa19.48■□□□□ 0.71
IRF3-224ENST00000599680 IGSF1Q8N6C5 1336 aa19.48■□□□□ 0.71
IRF3-224ENST00000599680 CC2D1BQ5T0F9 858 aaKnown RBP19.47■□□□□ 0.71
IRF3-224ENST00000599680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.47■□□□□ 0.71
IRF3-224ENST00000599680 PLEKHG2Q9H7P9 1386 aa19.46■□□□□ 0.71
IRF3-224ENST00000599680 MPRIPQ6WCQ1 1025 aa19.46■□□□□ 0.71
IRF3-224ENST00000599680 LRRC4BQ9NT99 713 aa19.46■□□□□ 0.71
IRF3-224ENST00000599680 ZBTB7AO95365 584 aa19.45■□□□□ 0.7
IRF3-224ENST00000599680 CNGB1Q14028 1251 aaPredicted RBP19.45■□□□□ 0.7
IRF3-224ENST00000599680 IFNL2Q8IZJ0 200 aa19.45■□□□□ 0.7
IRF3-224ENST00000599680 CCNL1Q9UK58 526 aaPredicted RBP19.45■□□□□ 0.7
IRF3-224ENST00000599680 VIRMAQ69YN4 1812 aaKnown RBP19.45■□□□□ 0.7
IRF3-224ENST00000599680 PER1O15534 1290 aaPredicted RBP19.44■□□□□ 0.7
IRF3-224ENST00000599680 KCNQ4P56696 695 aa19.43■□□□□ 0.7
IRF3-224ENST00000599680 ZNF827Q17R98 1081 aa19.43■□□□□ 0.7
IRF3-224ENST00000599680 PDGFDQ9GZP0 370 aaPredicted RBP19.43■□□□□ 0.7
IRF3-224ENST00000599680 PHKG2P15735 406 aa19.42■□□□□ 0.7
IRF3-224ENST00000599680 NKX1-1Q15270 411 aaPredicted RBP19.42■□□□□ 0.7
IRF3-224ENST00000599680 PLEKHO1Q53GL0 409 aaPredicted RBP19.42■□□□□ 0.7
IRF3-224ENST00000599680 ATF5Q9Y2D1 282 aaPredicted RBP19.42■□□□□ 0.7
IRF3-224ENST00000599680 PALLDQ8WX93 1383 aa19.42■□□□□ 0.7
IRF3-224ENST00000599680 HMGB2P26583 209 aaKnown RBP19.41■□□□□ 0.7
IRF3-224ENST00000599680 MTHFSP49914 203 aa19.41■□□□□ 0.7
IRF3-224ENST00000599680 SMARCC1Q92922 1105 aaPredicted RBP19.41■□□□□ 0.7
IRF3-224ENST00000599680 TFCP2L1Q9NZI6 479 aa19.41■□□□□ 0.7
IRF3-224ENST00000599680 AMOTQ4VCS5 1084 aa19.4■□□□□ 0.7
IRF3-224ENST00000599680 MTFR1LQ9H019 292 aa19.4■□□□□ 0.7
IRF3-224ENST00000599680 TMOD3Q9NYL9 352 aa19.4■□□□□ 0.7
IRF3-224ENST00000599680 NPC1L1Q9UHC9 1359 aa19.4■□□□□ 0.7
IRF3-224ENST00000599680 SULT6B1Q6IMI4 303 aa19.39■□□□□ 0.69
IRF3-224ENST00000599680 ZNF530Q6P9A1 599 aaPredicted RBP19.39■□□□□ 0.69
IRF3-224ENST00000599680 AKT1S1Q96B36 256 aa19.39■□□□□ 0.69
IRF3-224ENST00000599680 SCN11AQ9UI33 1791 aa19.39■□□□□ 0.69
IRF3-224ENST00000599680 HSP90AB1P08238 724 aaKnown RBP19.38■□□□□ 0.69
IRF3-224ENST00000599680 C4BP0C0L5 1744 aa19.38■□□□□ 0.69
IRF3-224ENST00000599680 IL13P35225 146 aa19.38■□□□□ 0.69
IRF3-224ENST00000599680 AEBP1Q8IUX7 1158 aa19.38■□□□□ 0.69
IRF3-224ENST00000599680 C1orf141Q5JVX7 400 aa19.37■□□□□ 0.69
IRF3-224ENST00000599680 PIGBQ92521 554 aa19.37■□□□□ 0.69
IRF3-224ENST00000599680 UBR3Q6ZT12 1888 aa19.35■□□□□ 0.69
IRF3-224ENST00000599680 KDRP35968 1356 aa19.35■□□□□ 0.69
IRF3-224ENST00000599680 MSH5O43196 834 aa19.35■□□□□ 0.69
IRF3-224ENST00000599680 DIAPH1O60610 1272 aaKnown RBP19.35■□□□□ 0.69
IRF3-224ENST00000599680 DCAF5Q96JK2 942 aa19.35■□□□□ 0.69
IRF3-224ENST00000599680 COL24A1Q17RW2 1714 aa19.34■□□□□ 0.69
IRF3-224ENST00000599680 PNPLA7Q6ZV29 1317 aa19.34■□□□□ 0.69
IRF3-224ENST00000599680 DCAF8L1A6NGE4 600 aa19.34■□□□□ 0.69
IRF3-224ENST00000599680 PTGER2P43116 358 aa19.34■□□□□ 0.69
IRF3-224ENST00000599680 SLC16A10Q8TF71 515 aa19.34■□□□□ 0.69
IRF3-224ENST00000599680 ERVV-2B6SEH9 535 aa19.33■□□□□ 0.68
IRF3-224ENST00000599680 HMOX1P09601 288 aa19.32■□□□□ 0.68
IRF3-224ENST00000599680 ZNF831Q5JPB2 1677 aa19.31■□□□□ 0.68
IRF3-224ENST00000599680 POLD1P28340 1107 aa19.31■□□□□ 0.68
IRF3-224ENST00000599680 CABP4P57796 275 aa19.31■□□□□ 0.68
IRF3-224ENST00000599680 AK7Q96M32 723 aa19.31■□□□□ 0.68
IRF3-224ENST00000599680 ASAP1Q9ULH1 1129 aa19.31■□□□□ 0.68
IRF3-224ENST00000599680 LOC102724428A0A0B4J2F2 783 aa19.3■□□□□ 0.68
IRF3-224ENST00000599680 U2SURPO15042 1029 aaKnown RBP19.3■□□□□ 0.68
IRF3-224ENST00000599680 SIK1P57059 783 aa19.3■□□□□ 0.68
IRF3-224ENST00000599680 CFAP53Q96M91 514 aa19.3■□□□□ 0.68
IRF3-224ENST00000599680 KDM6AO15550 1401 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms