RNA–Protein interactions for RNA: ENST00000599504.5

ZNF546-206, Transcript of zinc finger protein 546, humanhuman

TSL 4

Gene ZNF546, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-206ENST00000599504 PKD1L3Q7Z443 1732 aa16.28■□□□□ 0.2
ZNF546-206ENST00000599504 AMPHP49418 695 aa16.28■□□□□ 0.2
ZNF546-206ENST00000599504 TMF1P82094 1093 aa16.28■□□□□ 0.2
ZNF546-206ENST00000599504 TRIM26Q12899 539 aaPredicted RBP16.28■□□□□ 0.2
ZNF546-206ENST00000599504 AKT1S1Q96B36 256 aa16.28■□□□□ 0.2
ZNF546-206ENST00000599504 MAP3K5Q99683 1374 aa16.27■□□□□ 0.2
ZNF546-206ENST00000599504 DDX54Q8TDD1 881 aaKnown RBP16.27■□□□□ 0.2
ZNF546-206ENST00000599504 TOGARAM1Q9Y4F4 1720 aa16.26■□□□□ 0.19
ZNF546-206ENST00000599504 RRS1Q15050 365 aaKnown RBP16.26■□□□□ 0.19
ZNF546-206ENST00000599504 SLC27A3Q5K4L6 730 aa16.26■□□□□ 0.19
ZNF546-206ENST00000599504 NBPF6Q5VWK0 638 aa16.26■□□□□ 0.19
ZNF546-206ENST00000599504 NBPF4Q96M43 638 aa16.26■□□□□ 0.19
ZNF546-206ENST00000599504 SYT17Q9BSW7 474 aa16.26■□□□□ 0.19
ZNF546-206ENST00000599504 FHDC1Q9C0D6 1143 aaPredicted RBP16.26■□□□□ 0.19
ZNF546-206ENST00000599504 GGNBP2Q9H3C7 697 aa16.26■□□□□ 0.19
ZNF546-206ENST00000599504 C5P01031 1676 aa16.26■□□□□ 0.19
ZNF546-206ENST00000599504 KIF24Q5T7B8 1368 aa16.26■□□□□ 0.19
ZNF546-206ENST00000599504 ZCRB1Q8TBF4 217 aaKnown RBP16.25■□□□□ 0.19
ZNF546-206ENST00000599504 INSRP06213 1382 aa16.25■□□□□ 0.19
ZNF546-206ENST00000599504 CGNL1Q0VF96 1302 aa16.24■□□□□ 0.19
ZNF546-206ENST00000599504 PRIM1P49642 420 aaKnown RBP16.24■□□□□ 0.19
ZNF546-206ENST00000599504 NCAPD2Q15021 1401 aa16.24■□□□□ 0.19
ZNF546-206ENST00000599504 DCAF8L1A6NGE4 600 aa16.23■□□□□ 0.19
ZNF546-206ENST00000599504 FLT4P35916 1363 aa16.23■□□□□ 0.19
ZNF546-206ENST00000599504 PNPLA7Q6ZV29 1317 aa16.22■□□□□ 0.19
ZNF546-206ENST00000599504 SMG6Q86US8 1419 aaKnown RBP16.22■□□□□ 0.19
ZNF546-206ENST00000599504 CDCA8Q53HL2 280 aa16.22■□□□□ 0.19
ZNF546-206ENST00000599504 SLC16A10Q8TF71 515 aa16.22■□□□□ 0.19
ZNF546-206ENST00000599504 ARXQ96QS3 562 aa16.22■□□□□ 0.19
ZNF546-206ENST00000599504 CARD14Q9BXL6 1004 aa16.22■□□□□ 0.19
ZNF546-206ENST00000599504 UTRNP46939 3433 aa16.22■□□□□ 0.19
ZNF546-206ENST00000599504 HSP90AB2PQ58FF8 381 aa16.21■□□□□ 0.19
ZNF546-206ENST00000599504 USHBP1Q8N6Y0 703 aa16.2■□□□□ 0.18
ZNF546-206ENST00000599504 TIMELESSQ9UNS1 1208 aa16.2■□□□□ 0.18
ZNF546-206ENST00000599504 UBR3Q6ZT12 1888 aa16.19■□□□□ 0.18
ZNF546-206ENST00000599504 KCNQ4P56696 695 aa16.19■□□□□ 0.18
ZNF546-206ENST00000599504 SYTL4Q96C24 671 aaPredicted RBP16.19■□□□□ 0.18
ZNF546-206ENST00000599504 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
ZNF546-206ENST00000599504 RAPGEF4Q8WZA2 1011 aa16.17■□□□□ 0.18
ZNF546-206ENST00000599504 PCDH11XQ9BZA7 1347 aa16.17■□□□□ 0.18
ZNF546-206ENST00000599504 PCDH11YQ9BZA8 1340 aa16.17■□□□□ 0.18
ZNF546-206ENST00000599504 CLSPNQ9HAW4 1339 aa16.17■□□□□ 0.18
ZNF546-206ENST00000599504 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
ZNF546-206ENST00000599504 EMILIN1Q9Y6C2 1016 aa16.16■□□□□ 0.18
ZNF546-206ENST00000599504 C4BP0C0L5 1744 aa16.16■□□□□ 0.18
ZNF546-206ENST00000599504 CYP27B1O15528 508 aa16.15■□□□□ 0.18
ZNF546-206ENST00000599504 TATP17735 454 aaPredicted RBP16.15■□□□□ 0.18
ZNF546-206ENST00000599504 CCNL1Q9UK58 526 aaPredicted RBP16.15■□□□□ 0.18
ZNF546-206ENST00000599504 ZNF784Q8NCA9 323 aaPredicted RBP16.13■□□□□ 0.17
ZNF546-206ENST00000599504 WASHC2AQ641Q2 1341 aa16.13■□□□□ 0.17
ZNF546-206ENST00000599504 GOLGB1Q14789 3259 aaKnown RBP16.12■□□□□ 0.17
ZNF546-206ENST00000599504 POLD1P28340 1107 aa16.12■□□□□ 0.17
ZNF546-206ENST00000599504 NKX1-1Q15270 411 aaPredicted RBP16.12■□□□□ 0.17
ZNF546-206ENST00000599504 COL23A1Q86Y22 540 aaPredicted RBP16.12■□□□□ 0.17
ZNF546-206ENST00000599504 PALLDQ8WX93 1383 aa16.12■□□□□ 0.17
ZNF546-206ENST00000599504 ZNF831Q5JPB2 1677 aa16.11■□□□□ 0.17
ZNF546-206ENST00000599504 POLKQ9UBT6 870 aa16.09■□□□□ 0.17
ZNF546-206ENST00000599504 PLEKHG2Q9H7P9 1386 aa16.09■□□□□ 0.17
ZNF546-206ENST00000599504 NLGN2Q8NFZ4 835 aa16.08■□□□□ 0.16
ZNF546-206ENST00000599504 EYA1Q99502 592 aa16.08■□□□□ 0.16
ZNF546-206ENST00000599504 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.08■□□□□ 0.16
ZNF546-206ENST00000599504 HMGB2P26583 209 aaKnown RBP16.07■□□□□ 0.16
ZNF546-206ENST00000599504 MPRIPQ6WCQ1 1025 aa16.07■□□□□ 0.16
ZNF546-206ENST00000599504 COL5A3P25940 1745 aaPredicted RBP16.06■□□□□ 0.16
ZNF546-206ENST00000599504 PIGBQ92521 554 aa16.06■□□□□ 0.16
ZNF546-206ENST00000599504 SMARCC1Q92922 1105 aaPredicted RBP16.06■□□□□ 0.16
ZNF546-206ENST00000599504 GPR162Q16538 588 aa16.05■□□□□ 0.16
ZNF546-206ENST00000599504 AMIGO3Q86WK7 504 aa16.05■□□□□ 0.16
ZNF546-206ENST00000599504 SPG7Q9UQ90 795 aa16.05■□□□□ 0.16
ZNF546-206ENST00000599504 KIF13BQ9NQT8 1826 aa16.05■□□□□ 0.16
ZNF546-206ENST00000599504 VIRMAQ69YN4 1812 aaKnown RBP16.04■□□□□ 0.16
ZNF546-206ENST00000599504 PPM1GO15355 546 aaPredicted RBP16.04■□□□□ 0.16
ZNF546-206ENST00000599504 FLAD1Q8NFF5 587 aa16.04■□□□□ 0.16
ZNF546-206ENST00000599504 EIF4A2Q14240 407 aaKnown RBP16.03■□□□□ 0.16
ZNF546-206ENST00000599504 KLHL34Q8N239 644 aa16.03■□□□□ 0.16
ZNF546-206ENST00000599504 IGSF1Q8N6C5 1336 aa16.02■□□□□ 0.16
ZNF546-206ENST00000599504 PHKG2P15735 406 aa16.02■□□□□ 0.16
ZNF546-206ENST00000599504 YBX3P16989 372 aaKnown RBP eCLIP16.02■□□□□ 0.16
ZNF546-206ENST00000599504 KIAA1551Q9HCM1 1747 aa16.02■□□□□ 0.15
ZNF546-206ENST00000599504 MYH14Q7Z406 1995 aaKnown RBP16.02■□□□□ 0.15
ZNF546-206ENST00000599504 MSH5O43196 834 aa16.01■□□□□ 0.15
ZNF546-206ENST00000599504 MSL1Q68DK7 614 aa16.01■□□□□ 0.15
ZNF546-206ENST00000599504 IFNL2Q8IZJ0 200 aa16.01■□□□□ 0.15
ZNF546-206ENST00000599504 CD2APQ9Y5K6 639 aa16.01■□□□□ 0.15
ZNF546-206ENST00000599504 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
ZNF546-206ENST00000599504 KDRP35968 1356 aa16■□□□□ 0.15
ZNF546-206ENST00000599504 SCN11AQ9UI33 1791 aa16■□□□□ 0.15
ZNF546-206ENST00000599504 LOC102724428A0A0B4J2F2 783 aa16■□□□□ 0.15
ZNF546-206ENST00000599504 SIK1P57059 783 aa16■□□□□ 0.15
ZNF546-206ENST00000599504 EIF4G2P78344 907 aaKnown RBP eCLIP16■□□□□ 0.15
ZNF546-206ENST00000599504 LINC00116Q8NCU8 138 aa16■□□□□ 0.15
ZNF546-206ENST00000599504 ASAP1Q9ULH1 1129 aa16■□□□□ 0.15
ZNF546-206ENST00000599504 C4AP0C0L4 1744 aa15.99■□□□□ 0.15
ZNF546-206ENST00000599504 HSPA5P11021 654 aaKnown RBP15.99■□□□□ 0.15
ZNF546-206ENST00000599504 SSFA2P28290 1259 aa15.99■□□□□ 0.15
ZNF546-206ENST00000599504 AK7Q96M32 723 aa15.99■□□□□ 0.15
ZNF546-206ENST00000599504 PCGF6Q9BYE7 350 aa15.99■□□□□ 0.15
ZNF546-206ENST00000599504 TMOD3Q9NYL9 352 aa15.99■□□□□ 0.15
ZNF546-206ENST00000599504 ITPK1Q13572 414 aa15.98■□□□□ 0.15
ZNF546-206ENST00000599504 PANK3Q9H999 370 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms