RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 YBX3P16989 372 aaKnown RBP eCLIP13.44□□□□□ -0.262e-6■□□□□ 9.6
LINC00649-210ENST00000599421 NME9Q86XW9 330 aa13.43□□□□□ -0.26
LINC00649-210ENST00000599421 ATP10DQ9P241 1426 aa13.42□□□□□ -0.26
LINC00649-210ENST00000599421 KCNQ4P56696 695 aa13.42□□□□□ -0.26
LINC00649-210ENST00000599421 DDX54Q8TDD1 881 aaKnown RBP13.42□□□□□ -0.26
LINC00649-210ENST00000599421 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
LINC00649-210ENST00000599421 NSD2O96028 1365 aa13.41□□□□□ -0.26
LINC00649-210ENST00000599421 PRIM1P49642 420 aaKnown RBP13.4□□□□□ -0.26
LINC00649-210ENST00000599421 SYTL4Q96C24 671 aaPredicted RBP13.4□□□□□ -0.26
LINC00649-210ENST00000599421 EDC4Q6P2E9 1401 aaKnown RBP13.39□□□□□ -0.27
LINC00649-210ENST00000599421 IP6K1Q92551 441 aa13.39□□□□□ -0.27
LINC00649-210ENST00000599421 CCNL1Q9UK58 526 aaPredicted RBP13.39□□□□□ -0.27
LINC00649-210ENST00000599421 A0A1W2PP64 1363 aa13.39□□□□□ -0.27
LINC00649-210ENST00000599421 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
LINC00649-210ENST00000599421 C5P01031 1676 aa13.38□□□□□ -0.27
LINC00649-210ENST00000599421 ADCY9O60503 1353 aa13.38□□□□□ -0.27
LINC00649-210ENST00000599421 TONSLQ96HA7 1378 aa13.38□□□□□ -0.27
LINC00649-210ENST00000599421 HDGFL2Q7Z4V5 671 aaPredicted RBP13.38□□□□□ -0.27
LINC00649-210ENST00000599421 COL23A1Q86Y22 540 aaPredicted RBP13.38□□□□□ -0.27
LINC00649-210ENST00000599421 GPBP1L1Q9HC44 474 aaPredicted RBP13.38□□□□□ -0.27
LINC00649-210ENST00000599421 MSH5O43196 834 aa13.37□□□□□ -0.27
LINC00649-210ENST00000599421 HSPA6P17066 643 aa13.37□□□□□ -0.27
LINC00649-210ENST00000599421 CARD11Q9BXL7 1154 aa13.37□□□□□ -0.27
LINC00649-210ENST00000599421 MSL1Q68DK7 614 aa13.36□□□□□ -0.27
LINC00649-210ENST00000599421 TMC1Q8TDI8 760 aa13.36□□□□□ -0.27
LINC00649-210ENST00000599421 LTV1Q96GA3 475 aaPredicted RBP13.36□□□□□ -0.27
LINC00649-210ENST00000599421 SLC12A5Q9H2X9 1139 aa13.36□□□□□ -0.27
LINC00649-210ENST00000599421 CD2APQ9Y5K6 639 aa13.36□□□□□ -0.27
LINC00649-210ENST00000599421 KIF20BQ96Q89 1820 aa13.36□□□□□ -0.27
LINC00649-210ENST00000599421 USP47Q96K76 1375 aa13.35□□□□□ -0.27
LINC00649-210ENST00000599421 MEGF6O75095 1541 aa13.35□□□□□ -0.27
LINC00649-210ENST00000599421 ZCRB1Q8TBF4 217 aaKnown RBP13.35□□□□□ -0.27
LINC00649-210ENST00000599421 TERF2IPQ9NYB0 399 aa13.34□□□□□ -0.27
LINC00649-210ENST00000599421 MAP3K19Q56UN5 1328 aa13.33□□□□□ -0.28
LINC00649-210ENST00000599421 UBR3Q6ZT12 1888 aa13.32□□□□□ -0.28
LINC00649-210ENST00000599421 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
LINC00649-210ENST00000599421 HOXC9P31274 260 aa13.32□□□□□ -0.28
LINC00649-210ENST00000599421 FLAD1Q8NFF5 587 aa13.32□□□□□ -0.28
LINC00649-210ENST00000599421 TESK2Q96S53 571 aa13.32□□□□□ -0.28
LINC00649-210ENST00000599421 ZNF526Q8TF50 670 aaPredicted RBP13.31□□□□□ -0.28
LINC00649-210ENST00000599421 ITGB4P16144 1822 aa13.31□□□□□ -0.28
LINC00649-210ENST00000599421 CGNL1Q0VF96 1302 aa13.31□□□□□ -0.28
LINC00649-210ENST00000599421 C4BP0C0L5 1744 aa13.3□□□□□ -0.28
LINC00649-210ENST00000599421 TOGARAM1Q9Y4F4 1720 aa13.3□□□□□ -0.28
LINC00649-210ENST00000599421 AMPHP49418 695 aa13.3□□□□□ -0.28
LINC00649-210ENST00000599421 PUS7Q96PZ0 661 aaKnown RBP13.3□□□□□ -0.28
LINC00649-210ENST00000599421 RTL1A6NKG5 1358 aa13.3□□□□□ -0.28
LINC00649-210ENST00000599421 COG3Q96JB2 828 aa13.29□□□□□ -0.28
LINC00649-210ENST00000599421 PALLDQ8WX93 1383 aa13.29□□□□□ -0.28
LINC00649-210ENST00000599421 FBLN1P23142 703 aa13.28□□□□□ -0.28
LINC00649-210ENST00000599421 IGSF1Q8N6C5 1336 aa13.28□□□□□ -0.28
LINC00649-210ENST00000599421 CICQ96RK0 1608 aaPredicted RBP13.28□□□□□ -0.28
LINC00649-210ENST00000599421 ST20-MTHFSA0A0A6YYL1 179 aa13.27□□□□□ -0.29
LINC00649-210ENST00000599421 KIF3CO14782 793 aa13.27□□□□□ -0.29
LINC00649-210ENST00000599421 NBPF6Q5VWK0 638 aa13.27□□□□□ -0.29
LINC00649-210ENST00000599421 RAPGEF4Q8WZA2 1011 aa13.27□□□□□ -0.29
LINC00649-210ENST00000599421 NBPF4Q96M43 638 aa13.27□□□□□ -0.29
LINC00649-210ENST00000599421 ANKRD26Q9UPS8 1709 aa13.27□□□□□ -0.29
LINC00649-210ENST00000599421 MAP2P11137 1827 aaKnown RBP13.26□□□□□ -0.29
LINC00649-210ENST00000599421 SMG6Q86US8 1419 aaKnown RBP13.26□□□□□ -0.29
LINC00649-210ENST00000599421 AK7Q96M32 723 aa13.26□□□□□ -0.29
LINC00649-210ENST00000599421 NSD3Q9BZ95 1437 aa13.26□□□□□ -0.29
LINC00649-210ENST00000599421 PCDH11XQ9BZA7 1347 aa13.26□□□□□ -0.29
LINC00649-210ENST00000599421 PCDH11YQ9BZA8 1340 aa13.26□□□□□ -0.29
LINC00649-210ENST00000599421 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
LINC00649-210ENST00000599421 TATP17735 454 aaPredicted RBP13.25□□□□□ -0.29
LINC00649-210ENST00000599421 AMIGO3Q86WK7 504 aa13.25□□□□□ -0.29
LINC00649-210ENST00000599421 USHBP1Q8N6Y0 703 aa13.25□□□□□ -0.29
LINC00649-210ENST00000599421 APLP1P51693 650 aa13.24□□□□□ -0.29
LINC00649-210ENST00000599421 MPRIPQ6WCQ1 1025 aa13.24□□□□□ -0.29
LINC00649-210ENST00000599421 SMARCC1Q92922 1105 aaPredicted RBP13.24□□□□□ -0.29
LINC00649-210ENST00000599421 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
LINC00649-210ENST00000599421 PKD1L3Q7Z443 1732 aa13.24□□□□□ -0.29
LINC00649-210ENST00000599421 PCNTO95613 3336 aa13.23□□□□□ -0.29
LINC00649-210ENST00000599421 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.23□□□□□ -0.29
LINC00649-210ENST00000599421 RRS1Q15050 365 aaKnown RBP13.23□□□□□ -0.29
LINC00649-210ENST00000599421 KIAA1551Q9HCM1 1747 aa13.22□□□□□ -0.29
LINC00649-210ENST00000599421 CYP27B1O15528 508 aa13.22□□□□□ -0.29
LINC00649-210ENST00000599421 PHF14O94880 888 aa13.22□□□□□ -0.29
LINC00649-210ENST00000599421 SSFA2P28290 1259 aa13.22□□□□□ -0.29
LINC00649-210ENST00000599421 N4BP2Q86UW6 1770 aaPredicted RBP13.22□□□□□ -0.29
LINC00649-210ENST00000599421 INSRP06213 1382 aa13.21□□□□□ -0.29
LINC00649-210ENST00000599421 SMIM5Q71RC9 77 aa13.21□□□□□ -0.29
LINC00649-210ENST00000599421 WDR90Q96KV7 1748 aa13.2□□□□□ -0.3
LINC00649-210ENST00000599421 TOMM70O94826 608 aa13.2□□□□□ -0.3
LINC00649-210ENST00000599421 DNAJC5GQ8N7S2 189 aa13.2□□□□□ -0.3
LINC00649-210ENST00000599421 GGNBP2Q9H3C7 697 aa13.2□□□□□ -0.3
LINC00649-210ENST00000599421 BRCA1P38398 1863 aaKnown RBP13.2□□□□□ -0.3
LINC00649-210ENST00000599421 PXDNLA1KZ92 1463 aa13.19□□□□□ -0.3
LINC00649-210ENST00000599421 HSP90AB2PQ58FF8 381 aa13.19□□□□□ -0.3
LINC00649-210ENST00000599421 PIGBQ92521 554 aa13.19□□□□□ -0.3
LINC00649-210ENST00000599421 FLT4P35916 1363 aa13.19□□□□□ -0.3
LINC00649-210ENST00000599421 KIF24Q5T7B8 1368 aa13.19□□□□□ -0.3
LINC00649-210ENST00000599421 LOC102724428A0A0B4J2F2 783 aa13.18□□□□□ -0.3
LINC00649-210ENST00000599421 ZNF316A6NFI3 1004 aaPredicted RBP13.18□□□□□ -0.3
LINC00649-210ENST00000599421 FYB1O15117 783 aa13.18□□□□□ -0.3
LINC00649-210ENST00000599421 SIK1P57059 783 aa13.18□□□□□ -0.3
LINC00649-210ENST00000599421 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
LINC00649-210ENST00000599421 NCAPD2Q15021 1401 aa13.17□□□□□ -0.3
LINC00649-210ENST00000599421 SLC24A1O60721 1099 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms