RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 UBXN4Q92575 508 aa13.89□□□□□ -0.19
SCN8A-208ENST00000599343 SLC12A5Q9H2X9 1139 aa13.89□□□□□ -0.19
SCN8A-208ENST00000599343 MAP3K11Q16584 847 aa13.89□□□□□ -0.19
SCN8A-208ENST00000599343 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
SCN8A-208ENST00000599343 FERMT3Q86UX7 667 aa13.89□□□□□ -0.19
SCN8A-208ENST00000599343 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
SCN8A-208ENST00000599343 ZNF530Q6P9A1 599 aaPredicted RBP13.88□□□□□ -0.19
SCN8A-208ENST00000599343 TXNDC2Q86VQ3 553 aa13.88□□□□□ -0.19
SCN8A-208ENST00000599343 CCDC148Q8NFR7 591 aa13.88□□□□□ -0.19
SCN8A-208ENST00000599343 CCDC85AQ96PX6 553 aaPredicted RBP13.88□□□□□ -0.19
SCN8A-208ENST00000599343 USP5P45974 858 aa13.88□□□□□ -0.19
SCN8A-208ENST00000599343 CBX1P83916 185 aa13.88□□□□□ -0.19
SCN8A-208ENST00000599343 STAC3Q96MF2 364 aa13.88□□□□□ -0.19
SCN8A-208ENST00000599343 CUX1P39880 1505 aa13.88□□□□□ -0.19
SCN8A-208ENST00000599343 ZNF76P36508 570 aa13.87□□□□□ -0.19
SCN8A-208ENST00000599343 JAKMIP3Q5VZ66 844 aa13.87□□□□□ -0.19
SCN8A-208ENST00000599343 RAI14Q9P0K7 980 aa13.87□□□□□ -0.19
SCN8A-208ENST00000599343 FAM69CQ0P6D2 419 aa13.87□□□□□ -0.19
SCN8A-208ENST00000599343 CCDC83Q8IWF9 413 aa13.87□□□□□ -0.19
SCN8A-208ENST00000599343 CCDC113Q9H0I3 377 aa13.87□□□□□ -0.19
SCN8A-208ENST00000599343 TMX1Q9H3N1 280 aa13.87□□□□□ -0.19
SCN8A-208ENST00000599343 RRBP1Q9P2E9 1410 aaKnown RBP13.87□□□□□ -0.19
SCN8A-208ENST00000599343 USP8P40818 1118 aa13.87□□□□□ -0.19
SCN8A-208ENST00000599343 FYCO1Q9BQS8 1478 aa13.87□□□□□ -0.19
SCN8A-208ENST00000599343 NEBLO76041 1014 aa13.86□□□□□ -0.19
SCN8A-208ENST00000599343 TMCO3Q6UWJ1 677 aa13.86□□□□□ -0.19
SCN8A-208ENST00000599343 CDK19Q9BWU1 502 aa13.86□□□□□ -0.19
SCN8A-208ENST00000599343 ZSCAN29Q8IWY8 852 aaPredicted RBP13.86□□□□□ -0.19
SCN8A-208ENST00000599343 INCENPQ9NQS7 918 aa13.86□□□□□ -0.19
SCN8A-208ENST00000599343 CABP1Q9NZU7 370 aa13.86□□□□□ -0.19
SCN8A-208ENST00000599343 WDR63Q8IWG1 891 aa13.86□□□□□ -0.19
SCN8A-208ENST00000599343 CRACR2AQ9BSW2 395 aa13.86□□□□□ -0.19
SCN8A-208ENST00000599343 RRP9O43818 475 aaKnown RBP13.85□□□□□ -0.19
SCN8A-208ENST00000599343 CTNNA3Q9UI47 895 aa13.85□□□□□ -0.19
SCN8A-208ENST00000599343 CIZ1Q9ULV3 898 aaPredicted RBP13.85□□□□□ -0.19
SCN8A-208ENST00000599343 IDH1O75874 414 aaKnown RBP13.85□□□□□ -0.19
SCN8A-208ENST00000599343 MPHOSPH10O00566 681 aaKnown RBP13.85□□□□□ -0.19
SCN8A-208ENST00000599343 KLHL10Q6JEL2 608 aa13.85□□□□□ -0.19
SCN8A-208ENST00000599343 CASQ1P31415 396 aa13.85□□□□□ -0.19
SCN8A-208ENST00000599343 ZSCAN30Q86W11 494 aa13.85□□□□□ -0.19
SCN8A-208ENST00000599343 DYDC1Q8WWB3 177 aa13.85□□□□□ -0.19
SCN8A-208ENST00000599343 SMARCA5O60264 1052 aaPredicted RBP13.84□□□□□ -0.19
SCN8A-208ENST00000599343 PTPN14Q15678 1187 aa13.84□□□□□ -0.19
SCN8A-208ENST00000599343 ZNF397Q8NF99 534 aaPredicted RBP13.84□□□□□ -0.19
SCN8A-208ENST00000599343 DNA2P51530 1060 aa13.84□□□□□ -0.19
SCN8A-208ENST00000599343 MAP2K1Q02750 393 aaPredicted RBP13.84□□□□□ -0.19
SCN8A-208ENST00000599343 TOM1L2Q6ZVM7 507 aa13.84□□□□□ -0.19
SCN8A-208ENST00000599343 PNISRQ8TF01 805 aaKnown RBP13.84□□□□□ -0.19
SCN8A-208ENST00000599343 LRP2BPQ9P2M1 347 aa13.84□□□□□ -0.19
SCN8A-208ENST00000599343 GOLGA6L10A0A0M3HER8 536 aa13.84□□□□□ -0.19
SCN8A-208ENST00000599343 RRS1Q15050 365 aaKnown RBP13.84□□□□□ -0.19
SCN8A-208ENST00000599343 EXOC6BQ9Y2D4 811 aa13.84□□□□□ -0.19
SCN8A-208ENST00000599343 BTBD11A6QL63 1104 aa13.84□□□□□ -0.19
SCN8A-208ENST00000599343 KRT32Q14532 448 aa13.84□□□□□ -0.19
SCN8A-208ENST00000599343 TMEM57Q8N5G2 664 aa13.83□□□□□ -0.19
SCN8A-208ENST00000599343 CEP126Q9P2H0 1117 aa13.83□□□□□ -0.19
SCN8A-208ENST00000599343 SCAPERQ9BY12 1400 aa13.83□□□□□ -0.2
SCN8A-208ENST00000599343 IMMTQ16891 758 aaKnown RBP13.83□□□□□ -0.2
SCN8A-208ENST00000599343 WASF1Q92558 559 aa13.83□□□□□ -0.2
SCN8A-208ENST00000599343 SHTN1A0MZ66 631 aa13.83□□□□□ -0.2
SCN8A-208ENST00000599343 URI1O94763 535 aaPredicted RBP13.83□□□□□ -0.2
SCN8A-208ENST00000599343 SFPQP23246 707 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCN8A-208ENST00000599343 SPA17Q15506 151 aa13.83□□□□□ -0.2
SCN8A-208ENST00000599343 PRPF40BQ6NWY9 871 aaKnown RBP13.83□□□□□ -0.2
SCN8A-208ENST00000599343 BICDL1Q6ZP65 573 aa13.83□□□□□ -0.2
SCN8A-208ENST00000599343 CEP131Q9UPN4 1083 aa13.82□□□□□ -0.2
SCN8A-208ENST00000599343 GUCY1B3Q02153 619 aa13.82□□□□□ -0.2
SCN8A-208ENST00000599343 PROSER2Q86WR7 435 aaPredicted RBP13.82□□□□□ -0.2
SCN8A-208ENST00000599343 AIDAQ96BJ3 306 aa13.82□□□□□ -0.2
SCN8A-208ENST00000599343 FANCD2Q9BXW9 1451 aa13.82□□□□□ -0.2
SCN8A-208ENST00000599343 ATAD2BQ9ULI0 1458 aa13.82□□□□□ -0.2
SCN8A-208ENST00000599343 GIMAP7Q8NHV1 300 aa13.82□□□□□ -0.2
SCN8A-208ENST00000599343 GOPCQ9HD26 462 aa13.82□□□□□ -0.2
SCN8A-208ENST00000599343 SPG7Q9UQ90 795 aa13.82□□□□□ -0.2
SCN8A-208ENST00000599343 XPCQ01831 940 aaPredicted RBP13.82□□□□□ -0.2
SCN8A-208ENST00000599343 CCDC178Q5BJE1 867 aa13.82□□□□□ -0.2
SCN8A-208ENST00000599343 SKAP1Q86WV1 359 aa13.82□□□□□ -0.2
SCN8A-208ENST00000599343 CCDC97Q96F63 343 aaPredicted RBP13.82□□□□□ -0.2
SCN8A-208ENST00000599343 MIS18AQ9NYP9 233 aa13.82□□□□□ -0.2
SCN8A-208ENST00000599343 ARHGAP5Q13017 1502 aa13.82□□□□□ -0.2
SCN8A-208ENST00000599343 POLR3GO15318 223 aaPredicted RBP13.81□□□□□ -0.2
SCN8A-208ENST00000599343 TRERF1Q96PN7 1200 aa13.81□□□□□ -0.2
SCN8A-208ENST00000599343 CCDC184Q52MB2 194 aa13.81□□□□□ -0.2
SCN8A-208ENST00000599343 SLC26A8Q96RN1 970 aa13.81□□□□□ -0.2
SCN8A-208ENST00000599343 DESP17661 470 aa13.81□□□□□ -0.2
SCN8A-208ENST00000599343 KIF4BQ2VIQ3 1234 aa13.81□□□□□ -0.2
SCN8A-208ENST00000599343 GBP3Q9H0R5 595 aa13.81□□□□□ -0.2
SCN8A-208ENST00000599343 BCCIPQ9P287 314 aaKnown RBP eCLIP13.81□□□□□ -0.2
SCN8A-208ENST00000599343 KIF5CO60282 957 aa13.81□□□□□ -0.2
SCN8A-208ENST00000599343 LRRC9Q6ZRR7 1453 aa13.8□□□□□ -0.2
SCN8A-208ENST00000599343 CCDC91Q7Z6B0 441 aa13.8□□□□□ -0.2
SCN8A-208ENST00000599343 TRMT1Q9NXH9 659 aaKnown RBP13.8□□□□□ -0.2
SCN8A-208ENST00000599343 NUTM2BA6NNL0 878 aaPredicted RBP13.8□□□□□ -0.2
SCN8A-208ENST00000599343 NUTM2EB1AL46 878 aaPredicted RBP13.8□□□□□ -0.2
SCN8A-208ENST00000599343 ZSCAN12O43309 604 aa13.8□□□□□ -0.2
SCN8A-208ENST00000599343 NUTM2AQ8IVF1 878 aaPredicted RBP13.8□□□□□ -0.2
SCN8A-208ENST00000599343 ABCF2Q9UG63 623 aa13.8□□□□□ -0.2
SCN8A-208ENST00000599343 CCDC183Q5T5S1 534 aa13.8□□□□□ -0.2
SCN8A-208ENST00000599343 CLIP2Q9UDT6 1046 aa13.8□□□□□ -0.2
SCN8A-208ENST00000599343 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms