RNA–Protein interactions for RNA: ENST00000599220.1

TMEM143-210, Transcript of transmembrane protein 143, humanhuman

TSL 3

Gene TMEM143, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-210ENST00000599220 MEGF6O75095 1541 aa22.99■■□□□ 1.27
TMEM143-210ENST00000599220 SLC27A3Q5K4L6 730 aa22.99■■□□□ 1.27
TMEM143-210ENST00000599220 USHBP1Q8N6Y0 703 aa22.99■■□□□ 1.27
TMEM143-210ENST00000599220 ARXQ96QS3 562 aa22.99■■□□□ 1.27
TMEM143-210ENST00000599220 RTL1A6NKG5 1358 aa22.99■■□□□ 1.27
TMEM143-210ENST00000599220 AKT1S1Q96B36 256 aa22.98■■□□□ 1.27
TMEM143-210ENST00000599220 CDCA8Q53HL2 280 aa22.96■■□□□ 1.27
TMEM143-210ENST00000599220 DOT1LQ8TEK3 1739 aa22.96■■□□□ 1.27
TMEM143-210ENST00000599220 HSP90AB2PQ58FF8 381 aa22.95■■□□□ 1.26
TMEM143-210ENST00000599220 SMG6Q86US8 1419 aaKnown RBP22.95■■□□□ 1.26
TMEM143-210ENST00000599220 RAPGEF4Q8WZA2 1011 aa22.95■■□□□ 1.26
TMEM143-210ENST00000599220 SHANK3Q9BYB0 1731 aa22.94■■□□□ 1.26
TMEM143-210ENST00000599220 NSD2O96028 1365 aa22.94■■□□□ 1.26
TMEM143-210ENST00000599220 TFCP2L1Q9NZI6 479 aa22.94■■□□□ 1.26
TMEM143-210ENST00000599220 UTRNP46939 3433 aa22.92■■□□□ 1.26
TMEM143-210ENST00000599220 CGNL1Q0VF96 1302 aa22.92■■□□□ 1.26
TMEM143-210ENST00000599220 PNPLA7Q6ZV29 1317 aa22.92■■□□□ 1.26
TMEM143-210ENST00000599220 TATP17735 454 aaPredicted RBP22.92■■□□□ 1.26
TMEM143-210ENST00000599220 KLHL34Q8N239 644 aa22.91■■□□□ 1.26
TMEM143-210ENST00000599220 SLC16A10Q8TF71 515 aa22.91■■□□□ 1.26
TMEM143-210ENST00000599220 CARD14Q9BXL6 1004 aa22.91■■□□□ 1.26
TMEM143-210ENST00000599220 CCNL1Q9UK58 526 aaPredicted RBP22.91■■□□□ 1.26
TMEM143-210ENST00000599220 INSRP06213 1382 aa22.9■■□□□ 1.26
TMEM143-210ENST00000599220 KIF20BQ96Q89 1820 aa22.9■■□□□ 1.26
TMEM143-210ENST00000599220 FLT4P35916 1363 aa22.89■■□□□ 1.26
TMEM143-210ENST00000599220 POLD1P28340 1107 aa22.89■■□□□ 1.25
TMEM143-210ENST00000599220 NSD3Q9BZ95 1437 aa22.88■■□□□ 1.25
TMEM143-210ENST00000599220 LY75O60449 1722 aa22.88■■□□□ 1.25
TMEM143-210ENST00000599220 EMILIN1Q9Y6C2 1016 aa22.87■■□□□ 1.25
TMEM143-210ENST00000599220 QSER1Q2KHR3 1735 aa22.87■■□□□ 1.25
TMEM143-210ENST00000599220 MAP3K5Q99683 1374 aa22.87■■□□□ 1.25
TMEM143-210ENST00000599220 PPM1GO15355 546 aaPredicted RBP22.86■■□□□ 1.25
TMEM143-210ENST00000599220 TUBGCP6Q96RT7 1819 aa22.86■■□□□ 1.25
TMEM143-210ENST00000599220 PCDH11XQ9BZA7 1347 aa22.85■■□□□ 1.25
TMEM143-210ENST00000599220 PCDH11YQ9BZA8 1340 aa22.85■■□□□ 1.25
TMEM143-210ENST00000599220 MSH5O43196 834 aa22.85■■□□□ 1.25
TMEM143-210ENST00000599220 KIF24Q5T7B8 1368 aa22.85■■□□□ 1.25
TMEM143-210ENST00000599220 GPR162Q16538 588 aa22.84■■□□□ 1.25
TMEM143-210ENST00000599220 ZNF784Q8NCA9 323 aaPredicted RBP22.84■■□□□ 1.25
TMEM143-210ENST00000599220 MPRIPQ6WCQ1 1025 aa22.83■■□□□ 1.25
TMEM143-210ENST00000599220 CYP27B1O15528 508 aa22.82■■□□□ 1.24
TMEM143-210ENST00000599220 COL23A1Q86Y22 540 aaPredicted RBP22.82■■□□□ 1.24
TMEM143-210ENST00000599220 POLR3GLQ9BT43 218 aa22.82■■□□□ 1.24
TMEM143-210ENST00000599220 PCGF6Q9BYE7 350 aa22.81■■□□□ 1.24
TMEM143-210ENST00000599220 TIMELESSQ9UNS1 1208 aa22.81■■□□□ 1.24
TMEM143-210ENST00000599220 PELP1Q8IZL8 1130 aaKnown RBP22.8■■□□□ 1.24
TMEM143-210ENST00000599220 COL24A1Q17RW2 1714 aa22.79■■□□□ 1.24
TMEM143-210ENST00000599220 CHD4Q14839 1912 aa22.78■■□□□ 1.24
TMEM143-210ENST00000599220 PALLDQ8WX93 1383 aa22.78■■□□□ 1.24
TMEM143-210ENST00000599220 MSL1Q68DK7 614 aa22.78■■□□□ 1.24
TMEM143-210ENST00000599220 NLGN2Q8NFZ4 835 aa22.78■■□□□ 1.24
TMEM143-210ENST00000599220 WASHC2AQ641Q2 1341 aa22.76■■□□□ 1.23
TMEM143-210ENST00000599220 EYA1Q99502 592 aa22.75■■□□□ 1.23
TMEM143-210ENST00000599220 SPG7Q9UQ90 795 aa22.75■■□□□ 1.23
TMEM143-210ENST00000599220 C5P01031 1676 aa22.74■■□□□ 1.23
TMEM143-210ENST00000599220 TNNT2P45379 298 aaPredicted RBP22.74■■□□□ 1.23
TMEM143-210ENST00000599220 SMARCC1Q92922 1105 aaPredicted RBP22.74■■□□□ 1.23
TMEM143-210ENST00000599220 GOLGB1Q14789 3259 aaKnown RBP22.74■■□□□ 1.23
TMEM143-210ENST00000599220 TOGARAM1Q9Y4F4 1720 aa22.74■■□□□ 1.23
TMEM143-210ENST00000599220 MAP2P11137 1827 aaKnown RBP22.73■■□□□ 1.23
TMEM143-210ENST00000599220 PIGBQ92521 554 aa22.73■■□□□ 1.23
TMEM143-210ENST00000599220 POLKQ9UBT6 870 aa22.73■■□□□ 1.23
TMEM143-210ENST00000599220 PKD1L3Q7Z443 1732 aa22.73■■□□□ 1.23
TMEM143-210ENST00000599220 NCAPD2Q15021 1401 aa22.73■■□□□ 1.23
TMEM143-210ENST00000599220 HMGB2P26583 209 aaKnown RBP22.72■■□□□ 1.23
TMEM143-210ENST00000599220 NKX1-1Q15270 411 aaPredicted RBP22.72■■□□□ 1.23
TMEM143-210ENST00000599220 ITGB4P16144 1822 aa22.72■■□□□ 1.23
TMEM143-210ENST00000599220 CLSPNQ9HAW4 1339 aa22.72■■□□□ 1.23
TMEM143-210ENST00000599220 ANKRD26Q9UPS8 1709 aa22.71■■□□□ 1.23
TMEM143-210ENST00000599220 FLAD1Q8NFF5 587 aa22.7■■□□□ 1.22
TMEM143-210ENST00000599220 AK7Q96M32 723 aa22.7■■□□□ 1.22
TMEM143-210ENST00000599220 TAF1LQ8IZX4 1826 aa22.7■■□□□ 1.22
TMEM143-210ENST00000599220 PHF14O94880 888 aa22.68■■□□□ 1.22
TMEM143-210ENST00000599220 SMIM5Q71RC9 77 aa22.68■■□□□ 1.22
TMEM143-210ENST00000599220 AMIGO3Q86WK7 504 aa22.68■■□□□ 1.22
TMEM143-210ENST00000599220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.68■■□□□ 1.22
TMEM143-210ENST00000599220 TMOD3Q9NYL9 352 aa22.68■■□□□ 1.22
TMEM143-210ENST00000599220 YBX3P16989 372 aaKnown RBP eCLIP22.67■■□□□ 1.22
TMEM143-210ENST00000599220 EIF4A2Q14240 407 aaKnown RBP22.67■■□□□ 1.22
TMEM143-210ENST00000599220 IFNL2Q8IZJ0 200 aa22.67■■□□□ 1.22
TMEM143-210ENST00000599220 C4BP0C0L5 1744 aa22.67■■□□□ 1.22
TMEM143-210ENST00000599220 LOC102724428A0A0B4J2F2 783 aa22.66■■□□□ 1.22
TMEM143-210ENST00000599220 PHKG2P15735 406 aa22.66■■□□□ 1.22
TMEM143-210ENST00000599220 SIK1P57059 783 aa22.66■■□□□ 1.22
TMEM143-210ENST00000599220 EIF4G2P78344 907 aaKnown RBP eCLIP22.66■■□□□ 1.22
TMEM143-210ENST00000599220 ASAP1Q9ULH1 1129 aa22.66■■□□□ 1.22
TMEM143-210ENST00000599220 HSPA5P11021 654 aaKnown RBP22.65■■□□□ 1.22
TMEM143-210ENST00000599220 PANK3Q9H999 370 aa22.65■■□□□ 1.22
TMEM143-210ENST00000599220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.64■■□□□ 1.21
TMEM143-210ENST00000599220 GRIN3BO60391 1043 aa22.64■■□□□ 1.21
TMEM143-210ENST00000599220 LINC00116Q8NCU8 138 aa22.64■■□□□ 1.21
TMEM143-210ENST00000599220 CD2APQ9Y5K6 639 aa22.63■■□□□ 1.21
TMEM143-210ENST00000599220 ATP6V1AP38606 617 aa22.61■■□□□ 1.21
TMEM143-210ENST00000599220 C1QTNF8P60827 252 aa22.61■■□□□ 1.21
TMEM143-210ENST00000599220 ITPK1Q13572 414 aa22.61■■□□□ 1.21
TMEM143-210ENST00000599220 UBR3Q6ZT12 1888 aa22.6■■□□□ 1.21
TMEM143-210ENST00000599220 SSFA2P28290 1259 aa22.6■■□□□ 1.21
TMEM143-210ENST00000599220 ATG3Q9NT62 314 aa22.6■■□□□ 1.21
TMEM143-210ENST00000599220 GNPATO15228 680 aa22.59■■□□□ 1.21
TMEM143-210ENST00000599220 IGSF1Q8N6C5 1336 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms