RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 PDGFDQ9GZP0 370 aaPredicted RBP24.25■■□□□ 1.47
HOMER3-210ENST00000599097 INSRP06213 1382 aa24.25■■□□□ 1.47
HOMER3-210ENST00000599097 TATP17735 454 aaPredicted RBP24.24■■□□□ 1.47
HOMER3-210ENST00000599097 RRS1Q15050 365 aaKnown RBP24.24■■□□□ 1.47
HOMER3-210ENST00000599097 DOT1LQ8TEK3 1739 aa24.24■■□□□ 1.47
HOMER3-210ENST00000599097 MEGF6O75095 1541 aa24.23■■□□□ 1.47
HOMER3-210ENST00000599097 QSER1Q2KHR3 1735 aa24.22■■□□□ 1.47
HOMER3-210ENST00000599097 PCDH11XQ9BZA7 1347 aa24.22■■□□□ 1.47
HOMER3-210ENST00000599097 PCDH11YQ9BZA8 1340 aa24.22■■□□□ 1.47
HOMER3-210ENST00000599097 MAP3K5Q99683 1374 aa24.21■■□□□ 1.47
HOMER3-210ENST00000599097 POLD1P28340 1107 aa24.21■■□□□ 1.47
HOMER3-210ENST00000599097 PRIM1P49642 420 aaKnown RBP24.21■■□□□ 1.47
HOMER3-210ENST00000599097 ARXQ96QS3 562 aa24.21■■□□□ 1.47
HOMER3-210ENST00000599097 NBPF6Q5VWK0 638 aa24.2■■□□□ 1.46
HOMER3-210ENST00000599097 NBPF4Q96M43 638 aa24.2■■□□□ 1.46
HOMER3-210ENST00000599097 FHDC1Q9C0D6 1143 aaPredicted RBP24.2■■□□□ 1.46
HOMER3-210ENST00000599097 LRRC4BQ9NT99 713 aa24.2■■□□□ 1.46
HOMER3-210ENST00000599097 NSD3Q9BZ95 1437 aa24.19■■□□□ 1.46
HOMER3-210ENST00000599097 ZNF827Q17R98 1081 aa24.19■■□□□ 1.46
HOMER3-210ENST00000599097 AKT1S1Q96B36 256 aa24.19■■□□□ 1.46
HOMER3-210ENST00000599097 SYT17Q9BSW7 474 aa24.19■■□□□ 1.46
HOMER3-210ENST00000599097 TFCP2L1Q9NZI6 479 aa24.19■■□□□ 1.46
HOMER3-210ENST00000599097 RGPD2P0DJD1 1756 aa24.19■■□□□ 1.46
HOMER3-210ENST00000599097 FBLN1P23142 703 aa24.18■■□□□ 1.46
HOMER3-210ENST00000599097 SGIP1Q9BQI5 828 aa24.18■■□□□ 1.46
HOMER3-210ENST00000599097 SHANK3Q9BYB0 1731 aa24.18■■□□□ 1.46
HOMER3-210ENST00000599097 LY75O60449 1722 aa24.16■■□□□ 1.46
HOMER3-210ENST00000599097 CCNL1Q9UK58 526 aaPredicted RBP24.16■■□□□ 1.46
HOMER3-210ENST00000599097 NSD2O96028 1365 aa24.15■■□□□ 1.46
HOMER3-210ENST00000599097 HSP90AB2PQ58FF8 381 aa24.14■■□□□ 1.45
HOMER3-210ENST00000599097 USHBP1Q8N6Y0 703 aa24.14■■□□□ 1.45
HOMER3-210ENST00000599097 PNPLA7Q6ZV29 1317 aa24.11■■□□□ 1.45
HOMER3-210ENST00000599097 FLAD1Q8NFF5 587 aa24.1■■□□□ 1.45
HOMER3-210ENST00000599097 SMARCC1Q92922 1105 aaPredicted RBP24.1■■□□□ 1.45
HOMER3-210ENST00000599097 SPG7Q9UQ90 795 aa24.1■■□□□ 1.45
HOMER3-210ENST00000599097 ANKRD26Q9UPS8 1709 aa24.1■■□□□ 1.45
HOMER3-210ENST00000599097 PLEKHG2Q9H7P9 1386 aa24.09■■□□□ 1.45
HOMER3-210ENST00000599097 PPM1GO15355 546 aaPredicted RBP24.09■■□□□ 1.45
HOMER3-210ENST00000599097 CARD14Q9BXL6 1004 aa24.09■■□□□ 1.45
HOMER3-210ENST00000599097 EMILIN1Q9Y6C2 1016 aa24.08■■□□□ 1.45
HOMER3-210ENST00000599097 WASHC2AQ641Q2 1341 aa24.08■■□□□ 1.44
HOMER3-210ENST00000599097 PCGF6Q9BYE7 350 aa24.07■■□□□ 1.44
HOMER3-210ENST00000599097 NCAPD2Q15021 1401 aa24.07■■□□□ 1.44
HOMER3-210ENST00000599097 PKD1L3Q7Z443 1732 aa24.07■■□□□ 1.44
HOMER3-210ENST00000599097 PALLDQ8WX93 1383 aa24.06■■□□□ 1.44
HOMER3-210ENST00000599097 MSH5O43196 834 aa24.06■■□□□ 1.44
HOMER3-210ENST00000599097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.06■■□□□ 1.44
HOMER3-210ENST00000599097 COL24A1Q17RW2 1714 aa24.06■■□□□ 1.44
HOMER3-210ENST00000599097 EIF4G2P78344 907 aaKnown RBP eCLIP24.05■■□□□ 1.44
HOMER3-210ENST00000599097 GPR162Q16538 588 aa24.04■■□□□ 1.44
HOMER3-210ENST00000599097 KLHL34Q8N239 644 aa24.04■■□□□ 1.44
HOMER3-210ENST00000599097 TUBGCP6Q96RT7 1819 aa24.04■■□□□ 1.44
HOMER3-210ENST00000599097 C5P01031 1676 aa24.04■■□□□ 1.44
HOMER3-210ENST00000599097 MPRIPQ6WCQ1 1025 aa24.03■■□□□ 1.44
HOMER3-210ENST00000599097 POLR3GLQ9BT43 218 aa24.03■■□□□ 1.44
HOMER3-210ENST00000599097 CHD4Q14839 1912 aa24.03■■□□□ 1.44
HOMER3-210ENST00000599097 CYP27B1O15528 508 aa24.02■■□□□ 1.44
HOMER3-210ENST00000599097 KCNQ4P56696 695 aa24.02■■□□□ 1.44
HOMER3-210ENST00000599097 NKX1-1Q15270 411 aaPredicted RBP24■■□□□ 1.43
HOMER3-210ENST00000599097 MAP2P11137 1827 aaKnown RBP23.99■■□□□ 1.43
HOMER3-210ENST00000599097 AK7Q96M32 723 aa23.99■■□□□ 1.43
HOMER3-210ENST00000599097 POLKQ9UBT6 870 aa23.98■■□□□ 1.43
HOMER3-210ENST00000599097 IFNL2Q8IZJ0 200 aa23.97■■□□□ 1.43
HOMER3-210ENST00000599097 EYA1Q99502 592 aa23.97■■□□□ 1.43
HOMER3-210ENST00000599097 TMOD3Q9NYL9 352 aa23.97■■□□□ 1.43
HOMER3-210ENST00000599097 COL23A1Q86Y22 540 aaPredicted RBP23.96■■□□□ 1.43
HOMER3-210ENST00000599097 ZNF784Q8NCA9 323 aaPredicted RBP23.96■■□□□ 1.43
HOMER3-210ENST00000599097 ITGB4P16144 1822 aa23.96■■□□□ 1.43
HOMER3-210ENST00000599097 TAF1LQ8IZX4 1826 aa23.95■■□□□ 1.42
HOMER3-210ENST00000599097 TOGARAM1Q9Y4F4 1720 aa23.95■■□□□ 1.42
HOMER3-210ENST00000599097 C4BP0C0L5 1744 aa23.94■■□□□ 1.42
HOMER3-210ENST00000599097 GRIN3BO60391 1043 aa23.94■■□□□ 1.42
HOMER3-210ENST00000599097 PELP1Q8IZL8 1130 aaKnown RBP23.94■■□□□ 1.42
HOMER3-210ENST00000599097 HSP90AB1P08238 724 aaKnown RBP23.93■■□□□ 1.42
HOMER3-210ENST00000599097 CCER1Q8TC90 406 aaPredicted RBP23.93■■□□□ 1.42
HOMER3-210ENST00000599097 PIGBQ92521 554 aa23.93■■□□□ 1.42
HOMER3-210ENST00000599097 HSPA5P11021 654 aaKnown RBP23.91■■□□□ 1.42
HOMER3-210ENST00000599097 PHKG2P15735 406 aa23.91■■□□□ 1.42
HOMER3-210ENST00000599097 SSFA2P28290 1259 aa23.91■■□□□ 1.42
HOMER3-210ENST00000599097 TNNT2P45379 298 aaPredicted RBP23.91■■□□□ 1.42
HOMER3-210ENST00000599097 EIF4A2Q14240 407 aaKnown RBP23.91■■□□□ 1.42
HOMER3-210ENST00000599097 CD2APQ9Y5K6 639 aa23.91■■□□□ 1.42
HOMER3-210ENST00000599097 LOC102724428A0A0B4J2F2 783 aa23.9■■□□□ 1.42
HOMER3-210ENST00000599097 SIK1P57059 783 aa23.9■■□□□ 1.42
HOMER3-210ENST00000599097 IGSF1Q8N6C5 1336 aa23.89■■□□□ 1.42
HOMER3-210ENST00000599097 PANK3Q9H999 370 aa23.89■■□□□ 1.41
HOMER3-210ENST00000599097 AMOTQ4VCS5 1084 aa23.88■■□□□ 1.41
HOMER3-210ENST00000599097 MSL1Q68DK7 614 aa23.88■■□□□ 1.41
HOMER3-210ENST00000599097 PLEKHO1Q53GL0 409 aaPredicted RBP23.87■■□□□ 1.41
HOMER3-210ENST00000599097 NLGN2Q8NFZ4 835 aa23.87■■□□□ 1.41
HOMER3-210ENST00000599097 KNSTRNQ9Y448 316 aa23.87■■□□□ 1.41
HOMER3-210ENST00000599097 ERVV-2B6SEH9 535 aa23.86■■□□□ 1.41
HOMER3-210ENST00000599097 MORC1Q86VD1 984 aa23.86■■□□□ 1.41
HOMER3-210ENST00000599097 DCAF5Q96JK2 942 aa23.86■■□□□ 1.41
HOMER3-210ENST00000599097 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.85■■□□□ 1.41
HOMER3-210ENST00000599097 UBR3Q6ZT12 1888 aa23.85■■□□□ 1.41
HOMER3-210ENST00000599097 PHF14O94880 888 aa23.84■■□□□ 1.41
HOMER3-210ENST00000599097 ATP6V1AP38606 617 aa23.84■■□□□ 1.41
HOMER3-210ENST00000599097 UTRNP46939 3433 aa23.84■■□□□ 1.41
HOMER3-210ENST00000599097 GNPATO15228 680 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms