RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 DOT1LQ8TEK3 1739 aa12.27□□□□□ -0.45
ARHGEF1-215ENST00000598444 SMG6Q86US8 1419 aaKnown RBP12.27□□□□□ -0.45
ARHGEF1-215ENST00000598444 HSPA5P11021 654 aaKnown RBP12.26□□□□□ -0.45
ARHGEF1-215ENST00000598444 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
ARHGEF1-215ENST00000598444 RAPGEF4Q8WZA2 1011 aa12.26□□□□□ -0.45
ARHGEF1-215ENST00000598444 SYTL4Q96C24 671 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF1-215ENST00000598444 INSRP06213 1382 aa12.26□□□□□ -0.45
ARHGEF1-215ENST00000598444 FLT4P35916 1363 aa12.26□□□□□ -0.45
ARHGEF1-215ENST00000598444 PPM1GO15355 546 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF1-215ENST00000598444 ZBTB7AO95365 584 aa12.25□□□□□ -0.45
ARHGEF1-215ENST00000598444 TATP17735 454 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF1-215ENST00000598444 ATF5Q9Y2D1 282 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF1-215ENST00000598444 EMILIN1Q9Y6C2 1016 aa12.25□□□□□ -0.45
ARHGEF1-215ENST00000598444 CGNL1Q0VF96 1302 aa12.25□□□□□ -0.45
ARHGEF1-215ENST00000598444 MEGF6O75095 1541 aa12.25□□□□□ -0.45
ARHGEF1-215ENST00000598444 KIF24Q5T7B8 1368 aa12.24□□□□□ -0.45
ARHGEF1-215ENST00000598444 ANKRD26Q9UPS8 1709 aa12.24□□□□□ -0.45
ARHGEF1-215ENST00000598444 ITGB4P16144 1822 aa12.23□□□□□ -0.45
ARHGEF1-215ENST00000598444 LY75O60449 1722 aa12.23□□□□□ -0.45
ARHGEF1-215ENST00000598444 LRRC4BQ9NT99 713 aa12.23□□□□□ -0.45
ARHGEF1-215ENST00000598444 PAPPAQ13219 1627 aa12.22□□□□□ -0.45
ARHGEF1-215ENST00000598444 TUBGCP6Q96RT7 1819 aa12.21□□□□□ -0.45
ARHGEF1-215ENST00000598444 WASHC2AQ641Q2 1341 aa12.21□□□□□ -0.45
ARHGEF1-215ENST00000598444 QSER1Q2KHR3 1735 aa12.21□□□□□ -0.45
ARHGEF1-215ENST00000598444 PTGER2P43116 358 aa12.21□□□□□ -0.45
ARHGEF1-215ENST00000598444 TNNT2P45379 298 aaPredicted RBP12.21□□□□□ -0.45
ARHGEF1-215ENST00000598444 KCNQ4P56696 695 aa12.21□□□□□ -0.45
ARHGEF1-215ENST00000598444 SLC27A3Q5K4L6 730 aa12.21□□□□□ -0.45
ARHGEF1-215ENST00000598444 PANK3Q9H999 370 aa12.21□□□□□ -0.45
ARHGEF1-215ENST00000598444 DCAF8L1A6NGE4 600 aa12.2□□□□□ -0.46
ARHGEF1-215ENST00000598444 ZNF827Q17R98 1081 aa12.2□□□□□ -0.46
ARHGEF1-215ENST00000598444 MTFR1LQ9H019 292 aa12.2□□□□□ -0.46
ARHGEF1-215ENST00000598444 POLKQ9UBT6 870 aa12.2□□□□□ -0.46
ARHGEF1-215ENST00000598444 PCDH11XQ9BZA7 1347 aa12.19□□□□□ -0.46
ARHGEF1-215ENST00000598444 PCDH11YQ9BZA8 1340 aa12.19□□□□□ -0.46
ARHGEF1-215ENST00000598444 PKD1L3Q7Z443 1732 aa12.19□□□□□ -0.46
ARHGEF1-215ENST00000598444 NSD2O96028 1365 aa12.18□□□□□ -0.46
ARHGEF1-215ENST00000598444 TAF1LQ8IZX4 1826 aa12.18□□□□□ -0.46
ARHGEF1-215ENST00000598444 CYP27B1O15528 508 aa12.18□□□□□ -0.46
ARHGEF1-215ENST00000598444 AKT1S1Q96B36 256 aa12.18□□□□□ -0.46
ARHGEF1-215ENST00000598444 EYA1Q99502 592 aa12.18□□□□□ -0.46
ARHGEF1-215ENST00000598444 TFCP2L1Q9NZI6 479 aa12.18□□□□□ -0.46
ARHGEF1-215ENST00000598444 MPRIPQ6WCQ1 1025 aa12.17□□□□□ -0.46
ARHGEF1-215ENST00000598444 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF1-215ENST00000598444 SPG7Q9UQ90 795 aa12.17□□□□□ -0.46
ARHGEF1-215ENST00000598444 EIF4A2Q14240 407 aaKnown RBP12.16□□□□□ -0.46
ARHGEF1-215ENST00000598444 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
ARHGEF1-215ENST00000598444 TOGARAM1Q9Y4F4 1720 aa12.16□□□□□ -0.46
ARHGEF1-215ENST00000598444 CHD4Q14839 1912 aa12.15□□□□□ -0.46
ARHGEF1-215ENST00000598444 NCAPD2Q15021 1401 aa12.15□□□□□ -0.46
ARHGEF1-215ENST00000598444 MORC1Q86VD1 984 aa12.15□□□□□ -0.46
ARHGEF1-215ENST00000598444 SLC16A10Q8TF71 515 aa12.15□□□□□ -0.46
ARHGEF1-215ENST00000598444 ARXQ96QS3 562 aa12.15□□□□□ -0.46
ARHGEF1-215ENST00000598444 SYT17Q9BSW7 474 aa12.15□□□□□ -0.46
ARHGEF1-215ENST00000598444 FHDC1Q9C0D6 1143 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF1-215ENST00000598444 C5P01031 1676 aa12.15□□□□□ -0.46
ARHGEF1-215ENST00000598444 COL24A1Q17RW2 1714 aa12.14□□□□□ -0.47
ARHGEF1-215ENST00000598444 PNPLA7Q6ZV29 1317 aa12.14□□□□□ -0.47
ARHGEF1-215ENST00000598444 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.47
ARHGEF1-215ENST00000598444 KNSTRNQ9Y448 316 aa12.14□□□□□ -0.47
ARHGEF1-215ENST00000598444 MSH5O43196 834 aa12.13□□□□□ -0.47
ARHGEF1-215ENST00000598444 NKX1-1Q15270 411 aaPredicted RBP12.13□□□□□ -0.47
ARHGEF1-215ENST00000598444 SMARCC1Q92922 1105 aaPredicted RBP12.13□□□□□ -0.47
ARHGEF1-215ENST00000598444 YY1P25490 414 aa12.12□□□□□ -0.47
ARHGEF1-215ENST00000598444 HMGB2P26583 209 aaKnown RBP12.12□□□□□ -0.47
ARHGEF1-215ENST00000598444 POLD1P28340 1107 aa12.12□□□□□ -0.47
ARHGEF1-215ENST00000598444 IFNL2Q8IZJ0 200 aa12.12□□□□□ -0.47
ARHGEF1-215ENST00000598444 PIGBQ92521 554 aa12.12□□□□□ -0.47
ARHGEF1-215ENST00000598444 PALLDQ8WX93 1383 aa12.12□□□□□ -0.47
ARHGEF1-215ENST00000598444 PHKG2P15735 406 aa12.11□□□□□ -0.47
ARHGEF1-215ENST00000598444 COL23A1Q86Y22 540 aaPredicted RBP12.1□□□□□ -0.47
ARHGEF1-215ENST00000598444 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
ARHGEF1-215ENST00000598444 TMOD3Q9NYL9 352 aa12.1□□□□□ -0.47
ARHGEF1-215ENST00000598444 UTRNP46939 3433 aa12.1□□□□□ -0.47
ARHGEF1-215ENST00000598444 UBR3Q6ZT12 1888 aa12.1□□□□□ -0.47
ARHGEF1-215ENST00000598444 KIF7Q2M1P5 1343 aa12.1□□□□□ -0.47
ARHGEF1-215ENST00000598444 IGSF1Q8N6C5 1336 aa12.1□□□□□ -0.47
ARHGEF1-215ENST00000598444 VIRMAQ69YN4 1812 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-215ENST00000598444 C4BP0C0L5 1744 aa12.09□□□□□ -0.47
ARHGEF1-215ENST00000598444 PLEKHO1Q53GL0 409 aaPredicted RBP12.08□□□□□ -0.48
ARHGEF1-215ENST00000598444 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
ARHGEF1-215ENST00000598444 FLAD1Q8NFF5 587 aa12.08□□□□□ -0.48
ARHGEF1-215ENST00000598444 ASAP1Q9ULH1 1129 aa12.08□□□□□ -0.48
ARHGEF1-215ENST00000598444 LOC102724428A0A0B4J2F2 783 aa12.07□□□□□ -0.48
ARHGEF1-215ENST00000598444 SIK1P57059 783 aa12.07□□□□□ -0.48
ARHGEF1-215ENST00000598444 AK7Q96M32 723 aa12.07□□□□□ -0.48
ARHGEF1-215ENST00000598444 GOLGB1Q14789 3259 aaKnown RBP12.06□□□□□ -0.48
ARHGEF1-215ENST00000598444 MAP3K5Q99683 1374 aa12.06□□□□□ -0.48
ARHGEF1-215ENST00000598444 ERVV-2B6SEH9 535 aa12.06□□□□□ -0.48
ARHGEF1-215ENST00000598444 HSP90AB1P08238 724 aaKnown RBP12.06□□□□□ -0.48
ARHGEF1-215ENST00000598444 AMOTQ4VCS5 1084 aa12.06□□□□□ -0.48
ARHGEF1-215ENST00000598444 MSL1Q68DK7 614 aa12.06□□□□□ -0.48
ARHGEF1-215ENST00000598444 SULT6B1Q6IMI4 303 aa12.06□□□□□ -0.48
ARHGEF1-215ENST00000598444 ZNF530Q6P9A1 599 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF1-215ENST00000598444 AEBP1Q8IUX7 1158 aa12.06□□□□□ -0.48
ARHGEF1-215ENST00000598444 PLEKHG2Q9H7P9 1386 aa12.05□□□□□ -0.48
ARHGEF1-215ENST00000598444 PER1O15534 1290 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF1-215ENST00000598444 IL13P35225 146 aa12.05□□□□□ -0.48
ARHGEF1-215ENST00000598444 ATP6V1AP38606 617 aa12.05□□□□□ -0.48
ARHGEF1-215ENST00000598444 GPR162Q16538 588 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 258.1 ms