RNA–Protein interactions for RNA: ENST00000598178.1

LTBP4-221, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-221ENST00000598178 FAM208AQ9UK61 1670 aaKnown RBP17.44■□□□□ 0.38
LTBP4-221ENST00000598178 IL2RBP14784 551 aa17.43■□□□□ 0.38
LTBP4-221ENST00000598178 POLD1P28340 1107 aa17.43■□□□□ 0.38
LTBP4-221ENST00000598178 COG3Q96JB2 828 aa17.43■□□□□ 0.38
LTBP4-221ENST00000598178 TUBGCP6Q96RT7 1819 aa17.41■□□□□ 0.38
LTBP4-221ENST00000598178 GRIN3BO60391 1043 aa17.4■□□□□ 0.38
LTBP4-221ENST00000598178 PNPLA7Q6ZV29 1317 aa17.4■□□□□ 0.38
LTBP4-221ENST00000598178 LY75O60449 1722 aa17.39■□□□□ 0.37
LTBP4-221ENST00000598178 ANKRD24Q8TF21 1146 aa17.39■□□□□ 0.37
LTBP4-221ENST00000598178 NLRP2Q9NX02 1062 aa17.39■□□□□ 0.37
LTBP4-221ENST00000598178 KIF20BQ96Q89 1820 aa17.39■□□□□ 0.37
LTBP4-221ENST00000598178 CCER1Q8TC90 406 aaPredicted RBP17.37■□□□□ 0.37
LTBP4-221ENST00000598178 NLGN2Q8NFZ4 835 aa17.36■□□□□ 0.37
LTBP4-221ENST00000598178 RTL1A6NKG5 1358 aa17.36■□□□□ 0.37
LTBP4-221ENST00000598178 AMPHP49418 695 aa17.35■□□□□ 0.37
LTBP4-221ENST00000598178 IP6K1Q92551 441 aa17.35■□□□□ 0.37
LTBP4-221ENST00000598178 TFCP2L1Q9NZI6 479 aa17.35■□□□□ 0.37
LTBP4-221ENST00000598178 SMG6Q86US8 1419 aaKnown RBP17.35■□□□□ 0.37
LTBP4-221ENST00000598178 YBX3P16989 372 aaKnown RBP eCLIP17.34■□□□□ 0.37
LTBP4-221ENST00000598178 MAP3K19Q56UN5 1328 aa17.33■□□□□ 0.36
LTBP4-221ENST00000598178 PELP1Q8IZL8 1130 aaKnown RBP17.33■□□□□ 0.36
LTBP4-221ENST00000598178 KLHL34Q8N239 644 aa17.33■□□□□ 0.36
LTBP4-221ENST00000598178 LTV1Q96GA3 475 aaPredicted RBP17.31■□□□□ 0.36
LTBP4-221ENST00000598178 NSD3Q9BZ95 1437 aa17.3■□□□□ 0.36
LTBP4-221ENST00000598178 ATP10DQ9P241 1426 aa17.3■□□□□ 0.36
LTBP4-221ENST00000598178 DOT1LQ8TEK3 1739 aa17.3■□□□□ 0.36
LTBP4-221ENST00000598178 NSD2O96028 1365 aa17.3■□□□□ 0.36
LTBP4-221ENST00000598178 HOXC9P31274 260 aa17.3■□□□□ 0.36
LTBP4-221ENST00000598178 GGNBP2Q9H3C7 697 aa17.3■□□□□ 0.36
LTBP4-221ENST00000598178 ADCY9O60503 1353 aa17.29■□□□□ 0.36
LTBP4-221ENST00000598178 FYB1O15117 783 aa17.29■□□□□ 0.36
LTBP4-221ENST00000598178 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.36
LTBP4-221ENST00000598178 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
LTBP4-221ENST00000598178 CD2APQ9Y5K6 639 aa17.29■□□□□ 0.36
LTBP4-221ENST00000598178 KIF24Q5T7B8 1368 aa17.28■□□□□ 0.36
LTBP4-221ENST00000598178 HSPA6P17066 643 aa17.28■□□□□ 0.36
LTBP4-221ENST00000598178 HMGB2P26583 209 aaKnown RBP17.28■□□□□ 0.36
LTBP4-221ENST00000598178 ZEB1P37275 1124 aaPredicted RBP17.28■□□□□ 0.36
LTBP4-221ENST00000598178 PRIM1P49642 420 aaKnown RBP17.28■□□□□ 0.36
LTBP4-221ENST00000598178 GPBP1L1Q9HC44 474 aaPredicted RBP17.27■□□□□ 0.36
LTBP4-221ENST00000598178 FLT4P35916 1363 aa17.27■□□□□ 0.35
LTBP4-221ENST00000598178 CGNL1Q0VF96 1302 aa17.26■□□□□ 0.35
LTBP4-221ENST00000598178 KCNQ4P56696 695 aa17.26■□□□□ 0.35
LTBP4-221ENST00000598178 RRS1Q15050 365 aaKnown RBP17.26■□□□□ 0.35
LTBP4-221ENST00000598178 COL23A1Q86Y22 540 aaPredicted RBP17.26■□□□□ 0.35
LTBP4-221ENST00000598178 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
LTBP4-221ENST00000598178 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
LTBP4-221ENST00000598178 CCNL1Q9UK58 526 aaPredicted RBP17.25■□□□□ 0.35
LTBP4-221ENST00000598178 C5P01031 1676 aa17.24■□□□□ 0.35
LTBP4-221ENST00000598178 RGPD2P0DJD1 1756 aa17.24■□□□□ 0.35
LTBP4-221ENST00000598178 INSRP06213 1382 aa17.24■□□□□ 0.35
LTBP4-221ENST00000598178 FLAD1Q8NFF5 587 aa17.23■□□□□ 0.35
LTBP4-221ENST00000598178 ANKRD26Q9UPS8 1709 aa17.23■□□□□ 0.35
LTBP4-221ENST00000598178 TAF1LQ8IZX4 1826 aa17.23■□□□□ 0.35
LTBP4-221ENST00000598178 PCNTO95613 3336 aa17.23■□□□□ 0.35
LTBP4-221ENST00000598178 FBLN1P23142 703 aa17.22■□□□□ 0.35
LTBP4-221ENST00000598178 ZCRB1Q8TBF4 217 aaKnown RBP17.22■□□□□ 0.35
LTBP4-221ENST00000598178 RAPGEF4Q8WZA2 1011 aa17.22■□□□□ 0.35
LTBP4-221ENST00000598178 CARD14Q9BXL6 1004 aa17.21■□□□□ 0.35
LTBP4-221ENST00000598178 MSH5O43196 834 aa17.2■□□□□ 0.34
LTBP4-221ENST00000598178 HSPA5P11021 654 aaKnown RBP17.2■□□□□ 0.34
LTBP4-221ENST00000598178 MEGF6O75095 1541 aa17.2■□□□□ 0.34
LTBP4-221ENST00000598178 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
LTBP4-221ENST00000598178 PPM1GO15355 546 aaPredicted RBP17.17■□□□□ 0.34
LTBP4-221ENST00000598178 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
LTBP4-221ENST00000598178 NBPF6Q5VWK0 638 aa17.17■□□□□ 0.34
LTBP4-221ENST00000598178 MSL1Q68DK7 614 aa17.17■□□□□ 0.34
LTBP4-221ENST00000598178 NBPF4Q96M43 638 aa17.17■□□□□ 0.34
LTBP4-221ENST00000598178 PCDH11XQ9BZA7 1347 aa17.16■□□□□ 0.34
LTBP4-221ENST00000598178 PCDH11YQ9BZA8 1340 aa17.16■□□□□ 0.34
LTBP4-221ENST00000598178 CICQ96RK0 1608 aaPredicted RBP17.15■□□□□ 0.34
LTBP4-221ENST00000598178 MAP2P11137 1827 aaKnown RBP17.15■□□□□ 0.34
LTBP4-221ENST00000598178 USHBP1Q8N6Y0 703 aa17.15■□□□□ 0.34
LTBP4-221ENST00000598178 EMILIN1Q9Y6C2 1016 aa17.15■□□□□ 0.34
LTBP4-221ENST00000598178 UBR3Q6ZT12 1888 aa17.15■□□□□ 0.34
LTBP4-221ENST00000598178 C4BP0C0L5 1744 aa17.15■□□□□ 0.34
LTBP4-221ENST00000598178 TOGARAM1Q9Y4F4 1720 aa17.14■□□□□ 0.33
LTBP4-221ENST00000598178 KIF3CO14782 793 aa17.14■□□□□ 0.33
LTBP4-221ENST00000598178 WASHC2AQ641Q2 1341 aa17.13■□□□□ 0.33
LTBP4-221ENST00000598178 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
LTBP4-221ENST00000598178 PALLDQ8WX93 1383 aa17.13■□□□□ 0.33
LTBP4-221ENST00000598178 PKD1L3Q7Z443 1732 aa17.13■□□□□ 0.33
LTBP4-221ENST00000598178 APLP1P51693 650 aa17.12■□□□□ 0.33
LTBP4-221ENST00000598178 ZNF526Q8TF50 670 aaPredicted RBP17.12■□□□□ 0.33
LTBP4-221ENST00000598178 PANK3Q9H999 370 aa17.11■□□□□ 0.33
LTBP4-221ENST00000598178 ITGB4P16144 1822 aa17.11■□□□□ 0.33
LTBP4-221ENST00000598178 NCAPD2Q15021 1401 aa17.11■□□□□ 0.33
LTBP4-221ENST00000598178 DNAJC5GQ8N7S2 189 aa17.1■□□□□ 0.33
LTBP4-221ENST00000598178 KIF13BQ9NQT8 1826 aa17.1■□□□□ 0.33
LTBP4-221ENST00000598178 TNNT2P45379 298 aaPredicted RBP17.09■□□□□ 0.33
LTBP4-221ENST00000598178 SMARCC1Q92922 1105 aaPredicted RBP17.09■□□□□ 0.33
LTBP4-221ENST00000598178 SPG7Q9UQ90 795 aa17.09■□□□□ 0.33
LTBP4-221ENST00000598178 KNSTRNQ9Y448 316 aa17.09■□□□□ 0.33
LTBP4-221ENST00000598178 PLEKHG2Q9H7P9 1386 aa17.08■□□□□ 0.32
LTBP4-221ENST00000598178 TOMM70O94826 608 aa17.08■□□□□ 0.32
LTBP4-221ENST00000598178 SSFA2P28290 1259 aa17.08■□□□□ 0.32
LTBP4-221ENST00000598178 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
LTBP4-221ENST00000598178 AMIGO3Q86WK7 504 aa17.07■□□□□ 0.32
LTBP4-221ENST00000598178 AK7Q96M32 723 aa17.07■□□□□ 0.32
LTBP4-221ENST00000598178 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms