RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 COL3A1P02461 1466 aaPredicted RBP22.56■■□□□ 1.2
CAPN12-206ENST00000597354 U2SURPO15042 1029 aaKnown RBP22.56■■□□□ 1.2
CAPN12-206ENST00000597354 HMOX1P09601 288 aa22.56■■□□□ 1.2
CAPN12-206ENST00000597354 ACSBG1Q96GR2 724 aa22.56■■□□□ 1.2
CAPN12-206ENST00000597354 CFAP53Q96M91 514 aa22.56■■□□□ 1.2
CAPN12-206ENST00000597354 RGPD1P0DJD0 1748 aa22.55■■□□□ 1.2
CAPN12-206ENST00000597354 SHANK3Q9BYB0 1731 aa22.55■■□□□ 1.2
CAPN12-206ENST00000597354 PTF1AQ7RTS3 328 aa22.55■■□□□ 1.2
CAPN12-206ENST00000597354 DEFB132Q7Z7B7 95 aa22.55■■□□□ 1.2
CAPN12-206ENST00000597354 CCDC125Q86Z20 511 aa22.55■■□□□ 1.2
CAPN12-206ENST00000597354 RALBP1Q15311 655 aa22.54■■□□□ 1.2
CAPN12-206ENST00000597354 SBF2Q86WG5 1849 aa22.52■■□□□ 1.2
CAPN12-206ENST00000597354 CYP27B1O15528 508 aa22.51■■□□□ 1.19
CAPN12-206ENST00000597354 KCNQ2O43526 872 aa22.51■■□□□ 1.19
CAPN12-206ENST00000597354 APBA3O96018 575 aa22.51■■□□□ 1.19
CAPN12-206ENST00000597354 SPG7Q9UQ90 795 aa22.51■■□□□ 1.19
CAPN12-206ENST00000597354 KAT6BQ8WYB5 2073 aa22.51■■□□□ 1.19
CAPN12-206ENST00000597354 TNS1Q9HBL0 1735 aaKnown RBP22.51■■□□□ 1.19
CAPN12-206ENST00000597354 PCDH11XQ9BZA7 1347 aa22.5■■□□□ 1.19
CAPN12-206ENST00000597354 PCDH11YQ9BZA8 1340 aa22.5■■□□□ 1.19
CAPN12-206ENST00000597354 PKD1L3Q7Z443 1732 aa22.49■■□□□ 1.19
CAPN12-206ENST00000597354 EN1Q05925 392 aaPredicted RBP22.49■■□□□ 1.19
CAPN12-206ENST00000597354 PRKRIP1Q9H875 184 aaPredicted RBP22.49■■□□□ 1.19
CAPN12-206ENST00000597354 BAG6P46379 1132 aa22.48■■□□□ 1.19
CAPN12-206ENST00000597354 KDRP35968 1356 aa22.48■■□□□ 1.19
CAPN12-206ENST00000597354 BCL9O00512 1426 aa22.48■■□□□ 1.19
CAPN12-206ENST00000597354 PLEKHO1Q53GL0 409 aaPredicted RBP22.47■■□□□ 1.19
CAPN12-206ENST00000597354 SYTL4Q96C24 671 aaPredicted RBP22.47■■□□□ 1.19
CAPN12-206ENST00000597354 BCL11BQ9C0K0 894 aaPredicted RBP22.47■■□□□ 1.19
CAPN12-206ENST00000597354 MYBBP1AQ9BQG0 1328 aaKnown RBP22.47■■□□□ 1.19
CAPN12-206ENST00000597354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.46■■□□□ 1.19
CAPN12-206ENST00000597354 NUDCQ9Y266 331 aa22.46■■□□□ 1.19
CAPN12-206ENST00000597354 U2AF1L5P0DN76 240 aaPredicted RBP22.45■■□□□ 1.18
CAPN12-206ENST00000597354 PRIM1P49642 420 aaKnown RBP22.45■■□□□ 1.18
CAPN12-206ENST00000597354 U2AF1Q01081 240 aaKnown RBP eCLIP22.45■■□□□ 1.18
CAPN12-206ENST00000597354 PHKG2P15735 406 aa22.44■■□□□ 1.18
CAPN12-206ENST00000597354 EZH2Q15910 746 aaKnown RBP22.44■■□□□ 1.18
CAPN12-206ENST00000597354 ZNF530Q6P9A1 599 aaPredicted RBP22.44■■□□□ 1.18
CAPN12-206ENST00000597354 DOT1LQ8TEK3 1739 aa22.44■■□□□ 1.18
CAPN12-206ENST00000597354 NHSQ6T4R5 1651 aa22.43■■□□□ 1.18
CAPN12-206ENST00000597354 IFNL2Q8IZJ0 200 aa22.43■■□□□ 1.18
CAPN12-206ENST00000597354 AMOTQ4VCS5 1084 aa22.42■■□□□ 1.18
CAPN12-206ENST00000597354 PRKAR2BP31323 418 aa22.4■■□□□ 1.18
CAPN12-206ENST00000597354 CAMKK2Q96RR4 588 aa22.4■■□□□ 1.18
CAPN12-206ENST00000597354 RSPH6AQ9H0K4 717 aa22.39■■□□□ 1.17
CAPN12-206ENST00000597354 BTAF1O14981 1849 aa22.38■■□□□ 1.17
CAPN12-206ENST00000597354 TOGARAM1Q9Y4F4 1720 aa22.38■■□□□ 1.17
CAPN12-206ENST00000597354 NKX1-1Q15270 411 aaPredicted RBP22.38■■□□□ 1.17
CAPN12-206ENST00000597354 MTHFSDQ2M296 383 aaKnown RBP22.38■■□□□ 1.17
CAPN12-206ENST00000597354 C1orf141Q5JVX7 400 aa22.38■■□□□ 1.17
CAPN12-206ENST00000597354 MPRIPQ6WCQ1 1025 aa22.38■■□□□ 1.17
CAPN12-206ENST00000597354 ANP32CO43423 234 aa22.37■■□□□ 1.17
CAPN12-206ENST00000597354 PHACTR3Q96KR7 559 aa22.37■■□□□ 1.17
CAPN12-206ENST00000597354 PLEKHG2Q9H7P9 1386 aa22.37■■□□□ 1.17
CAPN12-206ENST00000597354 PLSCR1O15162 318 aa22.34■■□□□ 1.17
CAPN12-206ENST00000597354 FCHSD2O94868 740 aa22.34■■□□□ 1.17
CAPN12-206ENST00000597354 ITGB4P16144 1822 aa22.34■■□□□ 1.17
CAPN12-206ENST00000597354 HSP90AB1P08238 724 aaKnown RBP22.33■■□□□ 1.17
CAPN12-206ENST00000597354 AKAP4Q5JQC9 854 aa22.33■■□□□ 1.17
CAPN12-206ENST00000597354 KDM6AO15550 1401 aaPredicted RBP22.32■■□□□ 1.16
CAPN12-206ENST00000597354 CCDC184Q52MB2 194 aa22.32■■□□□ 1.16
CAPN12-206ENST00000597354 PROM2Q8N271 834 aa22.32■■□□□ 1.16
CAPN12-206ENST00000597354 PIGBQ92521 554 aa22.32■■□□□ 1.16
CAPN12-206ENST00000597354 DCAF5Q96JK2 942 aa22.32■■□□□ 1.16
CAPN12-206ENST00000597354 TXNRD1Q16881 649 aa22.31■■□□□ 1.16
CAPN12-206ENST00000597354 LGR6Q9HBX8 967 aa22.31■■□□□ 1.16
CAPN12-206ENST00000597354 TMOD3Q9NYL9 352 aa22.31■■□□□ 1.16
CAPN12-206ENST00000597354 KCNQ4P56696 695 aa22.29■■□□□ 1.16
CAPN12-206ENST00000597354 GAS2L2Q8NHY3 880 aa22.29■■□□□ 1.16
CAPN12-206ENST00000597354 RREB1Q92766 1687 aa22.29■■□□□ 1.16
CAPN12-206ENST00000597354 CABP4P57796 275 aa22.28■■□□□ 1.16
CAPN12-206ENST00000597354 WDR43Q15061 677 aaKnown RBP eCLIP22.28■■□□□ 1.16
CAPN12-206ENST00000597354 ERVV-2B6SEH9 535 aa22.27■■□□□ 1.16
CAPN12-206ENST00000597354 RNMTO43148 476 aaKnown RBP22.27■■□□□ 1.16
CAPN12-206ENST00000597354 NUP188Q5SRE5 1749 aa22.27■■□□□ 1.16
CAPN12-206ENST00000597354 RGPD3A6NKT7 1758 aaPredicted RBP22.27■■□□□ 1.16
CAPN12-206ENST00000597354 RGPD4Q7Z3J3 1758 aa22.27■■□□□ 1.16
CAPN12-206ENST00000597354 NFATC2IPQ8NCF5 419 aa22.26■■□□□ 1.15
CAPN12-206ENST00000597354 PLEKHF1Q96S99 279 aa22.26■■□□□ 1.15
CAPN12-206ENST00000597354 MAP3K5Q99683 1374 aa22.25■■□□□ 1.15
CAPN12-206ENST00000597354 SCN11AQ9UI33 1791 aa22.25■■□□□ 1.15
CAPN12-206ENST00000597354 PSDA5PKW4 1024 aaPredicted RBP22.25■■□□□ 1.15
CAPN12-206ENST00000597354 GNAT3A8MTJ3 354 aa22.25■■□□□ 1.15
CAPN12-206ENST00000597354 NEFMP07197 916 aa22.25■■□□□ 1.15
CAPN12-206ENST00000597354 CCDC146Q8IYE0 955 aa22.25■■□□□ 1.15
CAPN12-206ENST00000597354 ASAP1Q9ULH1 1129 aa22.25■■□□□ 1.15
CAPN12-206ENST00000597354 ADAMTS8Q9UP79 889 aa22.25■■□□□ 1.15
CAPN12-206ENST00000597354 LRRC4BQ9NT99 713 aa22.24■■□□□ 1.15
CAPN12-206ENST00000597354 VIRMAQ69YN4 1812 aaKnown RBP22.24■■□□□ 1.15
CAPN12-206ENST00000597354 PALLDQ8WX93 1383 aa22.24■■□□□ 1.15
CAPN12-206ENST00000597354 IL17REQ8NFR9 667 aa22.23■■□□□ 1.15
CAPN12-206ENST00000597354 MAPK8IP3Q9UPT6 1336 aa22.23■■□□□ 1.15
CAPN12-206ENST00000597354 R3HDM1Q15032 1099 aaKnown RBP22.22■■□□□ 1.15
CAPN12-206ENST00000597354 PNNQ9H307 717 aaKnown RBP22.22■■□□□ 1.15
CAPN12-206ENST00000597354 ANO8Q9HCE9 1232 aaPredicted RBP22.22■■□□□ 1.15
CAPN12-206ENST00000597354 MRS2Q9HD23 443 aa22.22■■□□□ 1.15
CAPN12-206ENST00000597354 ATG3Q9NT62 314 aa22.22■■□□□ 1.15
CAPN12-206ENST00000597354 CCNL1Q9UK58 526 aaPredicted RBP22.22■■□□□ 1.15
CAPN12-206ENST00000597354 LY75O60449 1722 aa22.21■■□□□ 1.15
CAPN12-206ENST00000597354 NBPF14Q5TI25 921 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms