RNA–Protein interactions for RNA: ENST00000596828.1

LINC01440-203, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 1,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-203ENST00000596828 ERBB3P21860 1342 aa13.73□□□□□ -0.21
LINC01440-203ENST00000596828 AMPHP49418 695 aa13.73□□□□□ -0.21
LINC01440-203ENST00000596828 RRS1Q15050 365 aaKnown RBP13.73□□□□□ -0.21
LINC01440-203ENST00000596828 EZH2Q15910 746 aaKnown RBP13.73□□□□□ -0.21
LINC01440-203ENST00000596828 CARD14Q9BXL6 1004 aa13.73□□□□□ -0.21
LINC01440-203ENST00000596828 MAP3K19Q56UN5 1328 aa13.72□□□□□ -0.21
LINC01440-203ENST00000596828 IP6K1Q92551 441 aa13.72□□□□□ -0.21
LINC01440-203ENST00000596828 OVOS2A0A0G2JMS6 1433 aa13.72□□□□□ -0.21
LINC01440-203ENST00000596828 CCDC7Q96M83 1385 aa13.71□□□□□ -0.21
LINC01440-203ENST00000596828 PSDA5PKW4 1024 aaPredicted RBP13.71□□□□□ -0.21
LINC01440-203ENST00000596828 EXOC5O00471 708 aa13.71□□□□□ -0.21
LINC01440-203ENST00000596828 HOXC9P31274 260 aa13.71□□□□□ -0.21
LINC01440-203ENST00000596828 MARCH10Q8NA82 808 aaPredicted RBP13.71□□□□□ -0.21
LINC01440-203ENST00000596828 CDCA7Q9BWT1 371 aaPredicted RBP13.71□□□□□ -0.21
LINC01440-203ENST00000596828 DISP2A7MBM2 1401 aa13.71□□□□□ -0.22
LINC01440-203ENST00000596828 ANKRD26Q9UPS8 1709 aa13.7□□□□□ -0.22
LINC01440-203ENST00000596828 RREB1Q92766 1687 aa13.69□□□□□ -0.22
LINC01440-203ENST00000596828 IL2RBP14784 551 aa13.69□□□□□ -0.22
LINC01440-203ENST00000596828 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC01440-203ENST00000596828 NUP188Q5SRE5 1749 aa13.69□□□□□ -0.22
LINC01440-203ENST00000596828 C11orf95C9JLR9 678 aaPredicted RBP13.68□□□□□ -0.22
LINC01440-203ENST00000596828 PTF1AQ7RTS3 328 aa13.68□□□□□ -0.22
LINC01440-203ENST00000596828 CAMKK2Q96RR4 588 aa13.68□□□□□ -0.22
LINC01440-203ENST00000596828 TNS2Q63HR2 1409 aa13.67□□□□□ -0.22
LINC01440-203ENST00000596828 PPM1GO15355 546 aaPredicted RBP13.67□□□□□ -0.22
LINC01440-203ENST00000596828 TNNT2P45379 298 aaPredicted RBP13.66□□□□□ -0.22
LINC01440-203ENST00000596828 R3HDM1Q15032 1099 aaKnown RBP13.66□□□□□ -0.22
LINC01440-203ENST00000596828 USHBP1Q8N6Y0 703 aa13.66□□□□□ -0.22
LINC01440-203ENST00000596828 ACSBG1Q96GR2 724 aa13.66□□□□□ -0.22
LINC01440-203ENST00000596828 SHANK3Q9BYB0 1731 aa13.65□□□□□ -0.22
LINC01440-203ENST00000596828 HSP90AB2PQ58FF8 381 aa13.65□□□□□ -0.22
LINC01440-203ENST00000596828 PANK3Q9H999 370 aa13.65□□□□□ -0.22
LINC01440-203ENST00000596828 EMILIN1Q9Y6C2 1016 aa13.65□□□□□ -0.22
LINC01440-203ENST00000596828 CGNL1Q0VF96 1302 aa13.64□□□□□ -0.23
LINC01440-203ENST00000596828 NHSQ6T4R5 1651 aa13.64□□□□□ -0.23
LINC01440-203ENST00000596828 RTL1A6NKG5 1358 aa13.64□□□□□ -0.23
LINC01440-203ENST00000596828 DDX54Q8TDD1 881 aaKnown RBP13.64□□□□□ -0.23
LINC01440-203ENST00000596828 BTAF1O14981 1849 aa13.64□□□□□ -0.23
LINC01440-203ENST00000596828 RGPD3A6NKT7 1758 aaPredicted RBP13.63□□□□□ -0.23
LINC01440-203ENST00000596828 RGPD4Q7Z3J3 1758 aa13.63□□□□□ -0.23
LINC01440-203ENST00000596828 KCNQ2O43526 872 aa13.63□□□□□ -0.23
LINC01440-203ENST00000596828 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
LINC01440-203ENST00000596828 NBPF6Q5VWK0 638 aa13.63□□□□□ -0.23
LINC01440-203ENST00000596828 NBPF4Q96M43 638 aa13.63□□□□□ -0.23
LINC01440-203ENST00000596828 BCL11BQ9C0K0 894 aaPredicted RBP13.63□□□□□ -0.23
LINC01440-203ENST00000596828 SMG6Q86US8 1419 aaKnown RBP13.63□□□□□ -0.23
LINC01440-203ENST00000596828 DOT1LQ8TEK3 1739 aa13.62□□□□□ -0.23
LINC01440-203ENST00000596828 FLT4P35916 1363 aa13.62□□□□□ -0.23
LINC01440-203ENST00000596828 PRR29P0C7W0 189 aa13.62□□□□□ -0.23
LINC01440-203ENST00000596828 PARD3Q8TEW0 1356 aa13.61□□□□□ -0.23
LINC01440-203ENST00000596828 MEGF6O75095 1541 aa13.61□□□□□ -0.23
LINC01440-203ENST00000596828 PRKAR2AP13861 404 aaKnown RBP13.61□□□□□ -0.23
LINC01440-203ENST00000596828 INSRP06213 1382 aa13.6□□□□□ -0.23
LINC01440-203ENST00000596828 KIF7Q2M1P5 1343 aa13.6□□□□□ -0.23
LINC01440-203ENST00000596828 HAX1O00165 279 aa13.59□□□□□ -0.23
LINC01440-203ENST00000596828 NBPF14Q5TI25 921 aa13.59□□□□□ -0.23
LINC01440-203ENST00000596828 BCL9O00512 1426 aa13.58□□□□□ -0.24
LINC01440-203ENST00000596828 PLSCR1O15162 318 aa13.58□□□□□ -0.24
LINC01440-203ENST00000596828 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
LINC01440-203ENST00000596828 RAPGEF4Q8WZA2 1011 aa13.58□□□□□ -0.24
LINC01440-203ENST00000596828 SYTL4Q96C24 671 aaPredicted RBP13.58□□□□□ -0.24
LINC01440-203ENST00000596828 SRCAPQ6ZRS2 3230 aa13.58□□□□□ -0.24
LINC01440-203ENST00000596828 TATP17735 454 aaPredicted RBP13.57□□□□□ -0.24
LINC01440-203ENST00000596828 CNGB1Q14028 1251 aaPredicted RBP13.57□□□□□ -0.24
LINC01440-203ENST00000596828 POLKQ9UBT6 870 aa13.57□□□□□ -0.24
LINC01440-203ENST00000596828 KNSTRNQ9Y448 316 aa13.57□□□□□ -0.24
LINC01440-203ENST00000596828 LRP5O75197 1615 aa13.57□□□□□ -0.24
LINC01440-203ENST00000596828 KIF24Q5T7B8 1368 aa13.57□□□□□ -0.24
LINC01440-203ENST00000596828 TXNRD1Q16881 649 aa13.56□□□□□ -0.24
LINC01440-203ENST00000596828 MORC1Q86VD1 984 aa13.56□□□□□ -0.24
LINC01440-203ENST00000596828 ITGB4P16144 1822 aa13.55□□□□□ -0.24
LINC01440-203ENST00000596828 WASHC2AQ641Q2 1341 aa13.55□□□□□ -0.24
LINC01440-203ENST00000596828 PKD1L3Q7Z443 1732 aa13.54□□□□□ -0.24
LINC01440-203ENST00000596828 PRIM1P49642 420 aaKnown RBP13.54□□□□□ -0.24
LINC01440-203ENST00000596828 ANO8Q9HCE9 1232 aaPredicted RBP13.54□□□□□ -0.24
LINC01440-203ENST00000596828 EIF4A2Q14240 407 aaKnown RBP13.53□□□□□ -0.24
LINC01440-203ENST00000596828 EYA1Q99502 592 aa13.53□□□□□ -0.24
LINC01440-203ENST00000596828 NSD2O96028 1365 aa13.53□□□□□ -0.24
LINC01440-203ENST00000596828 TOGARAM1Q9Y4F4 1720 aa13.52□□□□□ -0.25
LINC01440-203ENST00000596828 CASZ1Q86V15 1759 aa13.51□□□□□ -0.25
LINC01440-203ENST00000596828 LY75O60449 1722 aa13.51□□□□□ -0.25
LINC01440-203ENST00000596828 KCNQ4P56696 695 aa13.51□□□□□ -0.25
LINC01440-203ENST00000596828 CC2D1BQ5T0F9 858 aaKnown RBP13.51□□□□□ -0.25
LINC01440-203ENST00000596828 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
LINC01440-203ENST00000596828 IFNLR1Q8IU57 520 aaPredicted RBP13.51□□□□□ -0.25
LINC01440-203ENST00000596828 PDGFDQ9GZP0 370 aaPredicted RBP13.51□□□□□ -0.25
LINC01440-203ENST00000596828 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
LINC01440-203ENST00000596828 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
LINC01440-203ENST00000596828 STK32BQ9NY57 414 aa13.5□□□□□ -0.25
LINC01440-203ENST00000596828 TUBGCP6Q96RT7 1819 aa13.5□□□□□ -0.25
LINC01440-203ENST00000596828 CYP27B1O15528 508 aa13.49□□□□□ -0.25
LINC01440-203ENST00000596828 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
LINC01440-203ENST00000596828 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
LINC01440-203ENST00000596828 LRRC4BQ9NT99 713 aa13.48□□□□□ -0.25
LINC01440-203ENST00000596828 SPG7Q9UQ90 795 aa13.48□□□□□ -0.25
LINC01440-203ENST00000596828 PAPPAQ13219 1627 aa13.48□□□□□ -0.25
LINC01440-203ENST00000596828 NCAPD2Q15021 1401 aa13.47□□□□□ -0.25
LINC01440-203ENST00000596828 PER1O15534 1290 aaPredicted RBP13.47□□□□□ -0.25
LINC01440-203ENST00000596828 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.25
LINC01440-203ENST00000596828 TAF1LQ8IZX4 1826 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms