RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 ILDR1Q86SU0 546 aaPredicted RBP27.56■■■□□ 2
IRF3-214ENST00000596788 RRP7AQ9Y3A4 280 aaKnown RBP27.56■■■□□ 2
IRF3-214ENST00000596788 CCDC9Q9Y3X0 531 aaKnown RBP27.56■■■□□ 2
IRF3-214ENST00000596788 TATP17735 454 aaPredicted RBP27.55■■■□□ 2
IRF3-214ENST00000596788 IL2RBP14784 551 aa27.54■■■□□ 2
IRF3-214ENST00000596788 TMPOP42166 694 aaKnown RBP27.54■■■□□ 2
IRF3-214ENST00000596788 NFE2L2Q16236 605 aa27.54■■■□□ 2
IRF3-214ENST00000596788 MTHFSDQ2M296 383 aaKnown RBP27.54■■■□□ 2
IRF3-214ENST00000596788 VIRMAQ69YN4 1812 aaKnown RBP27.53■■■□□ 2
IRF3-214ENST00000596788 THSD7AQ9UPZ6 1657 aa27.53■■■□□ 2
IRF3-214ENST00000596788 THRAP3Q9Y2W1 955 aaKnown RBP27.52■■■□□ 2
IRF3-214ENST00000596788 SALL2Q9Y467 1007 aaPredicted RBP27.51■■□□□ 1.99
IRF3-214ENST00000596788 NEUROD2Q15784 382 aa27.5■■□□□ 1.99
IRF3-214ENST00000596788 PLEKHO1Q53GL0 409 aaPredicted RBP27.5■■□□□ 1.99
IRF3-214ENST00000596788 GAS2L2Q8NHY3 880 aa27.5■■□□□ 1.99
IRF3-214ENST00000596788 TRPC5Q9UL62 973 aaPredicted RBP27.5■■□□□ 1.99
IRF3-214ENST00000596788 AMOTQ4VCS5 1084 aa27.49■■□□□ 1.99
IRF3-214ENST00000596788 BARGINQ6ZT62 677 aa27.49■■□□□ 1.99
IRF3-214ENST00000596788 TNS2Q63HR2 1409 aa27.49■■□□□ 1.99
IRF3-214ENST00000596788 ZBED9Q6R2W3 1325 aa27.48■■□□□ 1.99
IRF3-214ENST00000596788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.48■■□□□ 1.99
IRF3-214ENST00000596788 ADAMTS7Q9UKP4 1686 aa27.47■■□□□ 1.99
IRF3-214ENST00000596788 RIPK4P57078 832 aa27.47■■□□□ 1.99
IRF3-214ENST00000596788 ZNF530Q6P9A1 599 aaPredicted RBP27.47■■□□□ 1.99
IRF3-214ENST00000596788 MAP3K5Q99683 1374 aa27.47■■□□□ 1.99
IRF3-214ENST00000596788 NCBP3Q53F19 620 aaKnown RBP27.46■■□□□ 1.99
IRF3-214ENST00000596788 GJD4Q96KN9 370 aaPredicted RBP27.46■■□□□ 1.99
IRF3-214ENST00000596788 PHF23Q9BUL5 403 aaPredicted RBP27.46■■□□□ 1.99
IRF3-214ENST00000596788 TRIM35Q9UPQ4 493 aa27.46■■□□□ 1.99
IRF3-214ENST00000596788 SPG7Q9UQ90 795 aa27.46■■□□□ 1.99
IRF3-214ENST00000596788 ZNF772Q68DY9 489 aaPredicted RBP27.45■■□□□ 1.98
IRF3-214ENST00000596788 NGEFQ8N5V2 710 aa27.45■■□□□ 1.98
IRF3-214ENST00000596788 CDCA7Q9BWT1 371 aaPredicted RBP27.45■■□□□ 1.98
IRF3-214ENST00000596788 ZNF521Q96K83 1311 aa27.44■■□□□ 1.98
IRF3-214ENST00000596788 FAM98CQ17RN3 349 aaKnown RBP27.44■■□□□ 1.98
IRF3-214ENST00000596788 CCDC27Q2M243 656 aa27.44■■□□□ 1.98
IRF3-214ENST00000596788 ZCRB1Q8TBF4 217 aaKnown RBP27.44■■□□□ 1.98
IRF3-214ENST00000596788 QTRT2Q9H974 415 aaKnown RBP27.44■■□□□ 1.98
IRF3-214ENST00000596788 SCN11AQ9UI33 1791 aa27.44■■□□□ 1.98
IRF3-214ENST00000596788 PCDH11XQ9BZA7 1347 aa27.41■■□□□ 1.98
IRF3-214ENST00000596788 PCDH11YQ9BZA8 1340 aa27.41■■□□□ 1.98
IRF3-214ENST00000596788 CYP27B1O15528 508 aa27.41■■□□□ 1.98
IRF3-214ENST00000596788 WWC1Q8IX03 1113 aa27.41■■□□□ 1.98
IRF3-214ENST00000596788 GNAT3A8MTJ3 354 aa27.4■■□□□ 1.98
IRF3-214ENST00000596788 PHKG2P15735 406 aa27.4■■□□□ 1.98
IRF3-214ENST00000596788 LMOD3Q0VAK6 560 aa27.4■■□□□ 1.98
IRF3-214ENST00000596788 AKAP4Q5JQC9 854 aa27.4■■□□□ 1.98
IRF3-214ENST00000596788 TOGARAM1Q9Y4F4 1720 aa27.4■■□□□ 1.98
IRF3-214ENST00000596788 C1orf141Q5JVX7 400 aa27.39■■□□□ 1.98
IRF3-214ENST00000596788 RGS17Q9UGC6 210 aaPredicted RBP27.39■■□□□ 1.98
IRF3-214ENST00000596788 KDM6AO15550 1401 aaPredicted RBP27.39■■□□□ 1.97
IRF3-214ENST00000596788 SIPA1L3O60292 1781 aaPredicted RBP27.37■■□□□ 1.97
IRF3-214ENST00000596788 DCTN1Q14203 1278 aa27.37■■□□□ 1.97
IRF3-214ENST00000596788 IFNL2Q8IZJ0 200 aa27.37■■□□□ 1.97
IRF3-214ENST00000596788 THUMPD2Q9BTF0 503 aaKnown RBP27.37■■□□□ 1.97
IRF3-214ENST00000596788 HTATSF1O43719 755 aaKnown RBP27.36■■□□□ 1.97
IRF3-214ENST00000596788 DDB1Q16531 1140 aa27.36■■□□□ 1.97
IRF3-214ENST00000596788 MCM10Q7L590 875 aa27.36■■□□□ 1.97
IRF3-214ENST00000596788 BRWD3Q6RI45 1802 aa27.36■■□□□ 1.97
IRF3-214ENST00000596788 MRC1P22897 1456 aa27.34■■□□□ 1.97
IRF3-214ENST00000596788 DOT1LQ8TEK3 1739 aa27.34■■□□□ 1.97
IRF3-214ENST00000596788 EXOC5O00471 708 aa27.34■■□□□ 1.97
IRF3-214ENST00000596788 DDX54Q8TDD1 881 aaKnown RBP27.34■■□□□ 1.97
IRF3-214ENST00000596788 RTF1Q92541 710 aaKnown RBP27.34■■□□□ 1.97
IRF3-214ENST00000596788 CEMIPQ8WUJ3 1361 aa27.34■■□□□ 1.97
IRF3-214ENST00000596788 ONECUT3O60422 494 aaPredicted RBP27.33■■□□□ 1.97
IRF3-214ENST00000596788 MPRIPQ6WCQ1 1025 aa27.33■■□□□ 1.97
IRF3-214ENST00000596788 IL17REQ8NFR9 667 aa27.33■■□□□ 1.97
IRF3-214ENST00000596788 A0A0G2JS52 829 aa27.32■■□□□ 1.96
IRF3-214ENST00000596788 RBM6P78332 1123 aaKnown RBP27.32■■□□□ 1.96
IRF3-214ENST00000596788 MYT1Q01538 1121 aa27.32■■□□□ 1.96
IRF3-214ENST00000596788 RNMTO43148 476 aaKnown RBP27.31■■□□□ 1.96
IRF3-214ENST00000596788 WDR63Q8IWG1 891 aa27.31■■□□□ 1.96
IRF3-214ENST00000596788 NKX1-1Q15270 411 aaPredicted RBP27.3■■□□□ 1.96
IRF3-214ENST00000596788 LGR6Q9HBX8 967 aa27.3■■□□□ 1.96
IRF3-214ENST00000596788 HSP90AB1P08238 724 aaKnown RBP27.29■■□□□ 1.96
IRF3-214ENST00000596788 GOLGA2Q08379 1002 aa27.29■■□□□ 1.96
IRF3-214ENST00000596788 POTEAQ6S8J7 498 aa27.29■■□□□ 1.96
IRF3-214ENST00000596788 SEPT12Q8IYM1 358 aa27.29■■□□□ 1.96
IRF3-214ENST00000596788 CDCA7LQ96GN5 454 aa27.29■■□□□ 1.96
IRF3-214ENST00000596788 ITGB4P16144 1822 aa27.29■■□□□ 1.96
IRF3-214ENST00000596788 IL16Q14005 1332 aa27.28■■□□□ 1.96
IRF3-214ENST00000596788 DCAF5Q96JK2 942 aa27.28■■□□□ 1.96
IRF3-214ENST00000596788 SPINK5Q9NQ38 1064 aaPredicted RBP27.28■■□□□ 1.96
IRF3-214ENST00000596788 KDM3BQ7LBC6 1761 aa27.27■■□□□ 1.96
IRF3-214ENST00000596788 MARCH10Q8NA82 808 aaPredicted RBP27.27■■□□□ 1.96
IRF3-214ENST00000596788 RGS12O14924 1447 aa27.26■■□□□ 1.95
IRF3-214ENST00000596788 CALD1Q05682 793 aaKnown RBP27.26■■□□□ 1.95
IRF3-214ENST00000596788 PDE3BQ13370 1112 aa27.26■■□□□ 1.95
IRF3-214ENST00000596788 RXRBP28702 533 aa27.24■■□□□ 1.95
IRF3-214ENST00000596788 SLFN5Q08AF3 891 aa27.24■■□□□ 1.95
IRF3-214ENST00000596788 PAPPAQ13219 1627 aa27.23■■□□□ 1.95
IRF3-214ENST00000596788 IFT57Q9NWB7 429 aa27.23■■□□□ 1.95
IRF3-214ENST00000596788 E9PSI1 815 aa27.22■■□□□ 1.95
IRF3-214ENST00000596788 ZNF853P0CG23 659 aa27.21■■□□□ 1.95
IRF3-214ENST00000596788 SBF2Q86WG5 1849 aa27.2■■□□□ 1.95
IRF3-214ENST00000596788 TEFQ10587 303 aa27.2■■□□□ 1.94
IRF3-214ENST00000596788 TRMT2AQ8IZ69 625 aaKnown RBP27.2■■□□□ 1.94
IRF3-214ENST00000596788 LAS1LQ9Y4W2 734 aaKnown RBP27.2■■□□□ 1.94
IRF3-214ENST00000596788 NHSQ6T4R5 1651 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms