RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 ZCRB1Q8TBF4 217 aaKnown RBP22.5■■□□□ 1.19
LIM2-202ENST00000596399 UTRNP46939 3433 aa22.5■■□□□ 1.19
LIM2-202ENST00000596399 DOT1LQ8TEK3 1739 aa22.49■■□□□ 1.19
LIM2-202ENST00000596399 DCAF8L1A6NGE4 600 aa22.49■■□□□ 1.19
LIM2-202ENST00000596399 AKT1S1Q96B36 256 aa22.49■■□□□ 1.19
LIM2-202ENST00000596399 SYT17Q9BSW7 474 aa22.49■■□□□ 1.19
LIM2-202ENST00000596399 NSD2O96028 1365 aa22.49■■□□□ 1.19
LIM2-202ENST00000596399 HSP90AB2PQ58FF8 381 aa22.48■■□□□ 1.19
LIM2-202ENST00000596399 CARD14Q9BXL6 1004 aa22.48■■□□□ 1.19
LIM2-202ENST00000596399 RTL1A6NKG5 1358 aa22.48■■□□□ 1.19
LIM2-202ENST00000596399 ARXQ96QS3 562 aa22.45■■□□□ 1.18
LIM2-202ENST00000596399 KIF20BQ96Q89 1820 aa22.45■■□□□ 1.18
LIM2-202ENST00000596399 SLC27A3Q5K4L6 730 aa22.44■■□□□ 1.18
LIM2-202ENST00000596399 PNPLA7Q6ZV29 1317 aa22.43■■□□□ 1.18
LIM2-202ENST00000596399 EMILIN1Q9Y6C2 1016 aa22.43■■□□□ 1.18
LIM2-202ENST00000596399 NSD3Q9BZ95 1437 aa22.41■■□□□ 1.18
LIM2-202ENST00000596399 INSRP06213 1382 aa22.41■■□□□ 1.18
LIM2-202ENST00000596399 TUBGCP6Q96RT7 1819 aa22.41■■□□□ 1.18
LIM2-202ENST00000596399 CDCA8Q53HL2 280 aa22.41■■□□□ 1.18
LIM2-202ENST00000596399 RAPGEF4Q8WZA2 1011 aa22.41■■□□□ 1.18
LIM2-202ENST00000596399 TFCP2L1Q9NZI6 479 aa22.41■■□□□ 1.18
LIM2-202ENST00000596399 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
LIM2-202ENST00000596399 LY75O60449 1722 aa22.4■■□□□ 1.18
LIM2-202ENST00000596399 FLT4P35916 1363 aa22.4■■□□□ 1.18
LIM2-202ENST00000596399 TATP17735 454 aaPredicted RBP22.39■■□□□ 1.17
LIM2-202ENST00000596399 PCGF6Q9BYE7 350 aa22.39■■□□□ 1.17
LIM2-202ENST00000596399 CCNL1Q9UK58 526 aaPredicted RBP22.39■■□□□ 1.17
LIM2-202ENST00000596399 PPM1GO15355 546 aaPredicted RBP22.37■■□□□ 1.17
LIM2-202ENST00000596399 KLHL34Q8N239 644 aa22.37■■□□□ 1.17
LIM2-202ENST00000596399 QSER1Q2KHR3 1735 aa22.37■■□□□ 1.17
LIM2-202ENST00000596399 CGNL1Q0VF96 1302 aa22.36■■□□□ 1.17
LIM2-202ENST00000596399 CYP27B1O15528 508 aa22.36■■□□□ 1.17
LIM2-202ENST00000596399 POLR3GLQ9BT43 218 aa22.35■■□□□ 1.17
LIM2-202ENST00000596399 SLC16A10Q8TF71 515 aa22.34■■□□□ 1.17
LIM2-202ENST00000596399 PCDH11XQ9BZA7 1347 aa22.33■■□□□ 1.17
LIM2-202ENST00000596399 PCDH11YQ9BZA8 1340 aa22.33■■□□□ 1.17
LIM2-202ENST00000596399 MPRIPQ6WCQ1 1025 aa22.33■■□□□ 1.17
LIM2-202ENST00000596399 KIF24Q5T7B8 1368 aa22.33■■□□□ 1.17
LIM2-202ENST00000596399 MSH5O43196 834 aa22.32■■□□□ 1.16
LIM2-202ENST00000596399 COL23A1Q86Y22 540 aaPredicted RBP22.32■■□□□ 1.16
LIM2-202ENST00000596399 MAP3K5Q99683 1374 aa22.32■■□□□ 1.16
LIM2-202ENST00000596399 GOLGB1Q14789 3259 aaKnown RBP22.32■■□□□ 1.16
LIM2-202ENST00000596399 COL24A1Q17RW2 1714 aa22.31■■□□□ 1.16
LIM2-202ENST00000596399 POLD1P28340 1107 aa22.31■■□□□ 1.16
LIM2-202ENST00000596399 TIMELESSQ9UNS1 1208 aa22.31■■□□□ 1.16
LIM2-202ENST00000596399 TOGARAM1Q9Y4F4 1720 aa22.31■■□□□ 1.16
LIM2-202ENST00000596399 ZNF784Q8NCA9 323 aaPredicted RBP22.3■■□□□ 1.16
LIM2-202ENST00000596399 NLGN2Q8NFZ4 835 aa22.3■■□□□ 1.16
LIM2-202ENST00000596399 TNNT2P45379 298 aaPredicted RBP22.29■■□□□ 1.16
LIM2-202ENST00000596399 MSL1Q68DK7 614 aa22.29■■□□□ 1.16
LIM2-202ENST00000596399 PALLDQ8WX93 1383 aa22.28■■□□□ 1.16
LIM2-202ENST00000596399 GPR162Q16538 588 aa22.28■■□□□ 1.16
LIM2-202ENST00000596399 EYA1Q99502 592 aa22.28■■□□□ 1.16
LIM2-202ENST00000596399 POLKQ9UBT6 870 aa22.28■■□□□ 1.16
LIM2-202ENST00000596399 WASHC2AQ641Q2 1341 aa22.28■■□□□ 1.16
LIM2-202ENST00000596399 C5P01031 1676 aa22.27■■□□□ 1.16
LIM2-202ENST00000596399 NCAPD2Q15021 1401 aa22.27■■□□□ 1.16
LIM2-202ENST00000596399 SMIM5Q71RC9 77 aa22.27■■□□□ 1.16
LIM2-202ENST00000596399 PKD1L3Q7Z443 1732 aa22.27■■□□□ 1.16
LIM2-202ENST00000596399 PELP1Q8IZL8 1130 aaKnown RBP22.27■■□□□ 1.16
LIM2-202ENST00000596399 ANKRD26Q9UPS8 1709 aa22.27■■□□□ 1.16
LIM2-202ENST00000596399 MAP2P11137 1827 aaKnown RBP22.27■■□□□ 1.15
LIM2-202ENST00000596399 PIGBQ92521 554 aa22.26■■□□□ 1.15
LIM2-202ENST00000596399 ITGB4P16144 1822 aa22.26■■□□□ 1.15
LIM2-202ENST00000596399 AMIGO3Q86WK7 504 aa22.25■■□□□ 1.15
LIM2-202ENST00000596399 TAF1LQ8IZX4 1826 aa22.23■■□□□ 1.15
LIM2-202ENST00000596399 HSPA5P11021 654 aaKnown RBP22.23■■□□□ 1.15
LIM2-202ENST00000596399 CLSPNQ9HAW4 1339 aa22.23■■□□□ 1.15
LIM2-202ENST00000596399 CHD4Q14839 1912 aa22.22■■□□□ 1.15
LIM2-202ENST00000596399 EIF4A2Q14240 407 aaKnown RBP22.22■■□□□ 1.15
LIM2-202ENST00000596399 NKX1-1Q15270 411 aaPredicted RBP22.22■■□□□ 1.15
LIM2-202ENST00000596399 SPG7Q9UQ90 795 aa22.22■■□□□ 1.15
LIM2-202ENST00000596399 C4BP0C0L5 1744 aa22.2■■□□□ 1.14
LIM2-202ENST00000596399 SMARCC1Q92922 1105 aaPredicted RBP22.19■■□□□ 1.14
LIM2-202ENST00000596399 PANK3Q9H999 370 aa22.19■■□□□ 1.14
LIM2-202ENST00000596399 PHF14O94880 888 aa22.18■■□□□ 1.14
LIM2-202ENST00000596399 PHKG2P15735 406 aa22.18■■□□□ 1.14
LIM2-202ENST00000596399 YBX3P16989 372 aaKnown RBP eCLIP22.18■■□□□ 1.14
LIM2-202ENST00000596399 EIF4G2P78344 907 aaKnown RBP eCLIP22.18■■□□□ 1.14
LIM2-202ENST00000596399 ASAP1Q9ULH1 1129 aa22.18■■□□□ 1.14
LIM2-202ENST00000596399 LINC00116Q8NCU8 138 aa22.17■■□□□ 1.14
LIM2-202ENST00000596399 AK7Q96M32 723 aa22.17■■□□□ 1.14
LIM2-202ENST00000596399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.16■■□□□ 1.14
LIM2-202ENST00000596399 TMOD3Q9NYL9 352 aa22.16■■□□□ 1.14
LIM2-202ENST00000596399 LOC102724428A0A0B4J2F2 783 aa22.15■■□□□ 1.14
LIM2-202ENST00000596399 SIK1P57059 783 aa22.15■■□□□ 1.14
LIM2-202ENST00000596399 IFNL2Q8IZJ0 200 aa22.15■■□□□ 1.14
LIM2-202ENST00000596399 ITPK1Q13572 414 aa22.14■■□□□ 1.13
LIM2-202ENST00000596399 FLAD1Q8NFF5 587 aa22.14■■□□□ 1.13
LIM2-202ENST00000596399 UBR3Q6ZT12 1888 aa22.13■■□□□ 1.13
LIM2-202ENST00000596399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.13■■□□□ 1.13
LIM2-202ENST00000596399 IGSF1Q8N6C5 1336 aa22.12■■□□□ 1.13
LIM2-202ENST00000596399 CCER1Q8TC90 406 aaPredicted RBP22.12■■□□□ 1.13
LIM2-202ENST00000596399 ATG3Q9NT62 314 aa22.12■■□□□ 1.13
LIM2-202ENST00000596399 ATP6V1AP38606 617 aa22.1■■□□□ 1.13
LIM2-202ENST00000596399 AEBP1Q8IUX7 1158 aa22.09■■□□□ 1.13
LIM2-202ENST00000596399 WWC3Q9ULE0 1092 aa22.09■■□□□ 1.13
LIM2-202ENST00000596399 CD2APQ9Y5K6 639 aa22.09■■□□□ 1.13
LIM2-202ENST00000596399 GNPATO15228 680 aa22.08■■□□□ 1.13
LIM2-202ENST00000596399 MORC1Q86VD1 984 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms