RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-204ENST00000596386 ATF5Q9Y2D1 282 aaPredicted RBP21.86■■□□□ 1.09
PSMC4-204ENST00000596386 NSD3Q9BZ95 1437 aa21.86■■□□□ 1.09
PSMC4-204ENST00000596386 INSRP06213 1382 aa21.86■■□□□ 1.09
PSMC4-204ENST00000596386 FLT4P35916 1363 aa21.86■■□□□ 1.09
PSMC4-204ENST00000596386 CARD14Q9BXL6 1004 aa21.85■■□□□ 1.09
PSMC4-204ENST00000596386 CGNL1Q0VF96 1302 aa21.84■■□□□ 1.09
PSMC4-204ENST00000596386 ZNF827Q17R98 1081 aa21.84■■□□□ 1.09
PSMC4-204ENST00000596386 SLC27A3Q5K4L6 730 aa21.84■■□□□ 1.09
PSMC4-204ENST00000596386 HSP90AB2PQ58FF8 381 aa21.83■■□□□ 1.09
PSMC4-204ENST00000596386 USHBP1Q8N6Y0 703 aa21.83■■□□□ 1.09
PSMC4-204ENST00000596386 SYTL4Q96C24 671 aaPredicted RBP21.83■■□□□ 1.09
PSMC4-204ENST00000596386 NSD2O96028 1365 aa21.83■■□□□ 1.08
PSMC4-204ENST00000596386 PRIM1P49642 420 aaKnown RBP21.82■■□□□ 1.08
PSMC4-204ENST00000596386 RAPGEF4Q8WZA2 1011 aa21.82■■□□□ 1.08
PSMC4-204ENST00000596386 SGIP1Q9BQI5 828 aa21.82■■□□□ 1.08
PSMC4-204ENST00000596386 PCGF6Q9BYE7 350 aa21.82■■□□□ 1.08
PSMC4-204ENST00000596386 DCAF8L1A6NGE4 600 aa21.81■■□□□ 1.08
PSMC4-204ENST00000596386 LY75O60449 1722 aa21.8■■□□□ 1.08
PSMC4-204ENST00000596386 QSER1Q2KHR3 1735 aa21.8■■□□□ 1.08
PSMC4-204ENST00000596386 AKT1S1Q96B36 256 aa21.8■■□□□ 1.08
PSMC4-204ENST00000596386 ANKRD26Q9UPS8 1709 aa21.79■■□□□ 1.08
PSMC4-204ENST00000596386 TATP17735 454 aaPredicted RBP21.78■■□□□ 1.08
PSMC4-204ENST00000596386 YY1P25490 414 aa21.78■■□□□ 1.08
PSMC4-204ENST00000596386 EMILIN1Q9Y6C2 1016 aa21.78■■□□□ 1.08
PSMC4-204ENST00000596386 FHDC1Q9C0D6 1143 aaPredicted RBP21.77■■□□□ 1.08
PSMC4-204ENST00000596386 PCDH11XQ9BZA7 1347 aa21.77■■□□□ 1.07
PSMC4-204ENST00000596386 PCDH11YQ9BZA8 1340 aa21.77■■□□□ 1.07
PSMC4-204ENST00000596386 UTRNP46939 3433 aa21.76■■□□□ 1.07
PSMC4-204ENST00000596386 SYT17Q9BSW7 474 aa21.75■■□□□ 1.07
PSMC4-204ENST00000596386 TUBGCP6Q96RT7 1819 aa21.75■■□□□ 1.07
PSMC4-204ENST00000596386 NCAPD2Q15021 1401 aa21.74■■□□□ 1.07
PSMC4-204ENST00000596386 KCNQ4P56696 695 aa21.74■■□□□ 1.07
PSMC4-204ENST00000596386 ARXQ96QS3 562 aa21.74■■□□□ 1.07
PSMC4-204ENST00000596386 PKD1L3Q7Z443 1732 aa21.74■■□□□ 1.07
PSMC4-204ENST00000596386 PNPLA7Q6ZV29 1317 aa21.74■■□□□ 1.07
PSMC4-204ENST00000596386 SLC16A10Q8TF71 515 aa21.73■■□□□ 1.07
PSMC4-204ENST00000596386 CCNL1Q9UK58 526 aaPredicted RBP21.73■■□□□ 1.07
PSMC4-204ENST00000596386 MAP3K5Q99683 1374 aa21.73■■□□□ 1.07
PSMC4-204ENST00000596386 TFCP2L1Q9NZI6 479 aa21.72■■□□□ 1.07
PSMC4-204ENST00000596386 COL24A1Q17RW2 1714 aa21.72■■□□□ 1.07
PSMC4-204ENST00000596386 PPM1GO15355 546 aaPredicted RBP21.71■■□□□ 1.07
PSMC4-204ENST00000596386 WASHC2AQ641Q2 1341 aa21.71■■□□□ 1.07
PSMC4-204ENST00000596386 MAP2P11137 1827 aaKnown RBP21.71■■□□□ 1.07
PSMC4-204ENST00000596386 TOGARAM1Q9Y4F4 1720 aa21.7■■□□□ 1.06
PSMC4-204ENST00000596386 CYP27B1O15528 508 aa21.7■■□□□ 1.06
PSMC4-204ENST00000596386 POLR3GLQ9BT43 218 aa21.69■■□□□ 1.06
PSMC4-204ENST00000596386 EIF4G2P78344 907 aaKnown RBP eCLIP21.68■■□□□ 1.06
PSMC4-204ENST00000596386 C5P01031 1676 aa21.67■■□□□ 1.06
PSMC4-204ENST00000596386 POLKQ9UBT6 870 aa21.67■■□□□ 1.06
PSMC4-204ENST00000596386 PALLDQ8WX93 1383 aa21.66■■□□□ 1.06
PSMC4-204ENST00000596386 HSPA5P11021 654 aaKnown RBP21.66■■□□□ 1.06
PSMC4-204ENST00000596386 POLD1P28340 1107 aa21.66■■□□□ 1.06
PSMC4-204ENST00000596386 ITGB4P16144 1822 aa21.66■■□□□ 1.06
PSMC4-204ENST00000596386 MPRIPQ6WCQ1 1025 aa21.65■■□□□ 1.06
PSMC4-204ENST00000596386 EYA1Q99502 592 aa21.65■■□□□ 1.06
PSMC4-204ENST00000596386 SPG7Q9UQ90 795 aa21.64■■□□□ 1.05
PSMC4-204ENST00000596386 NKX1-1Q15270 411 aaPredicted RBP21.63■■□□□ 1.05
PSMC4-204ENST00000596386 CCER1Q8TC90 406 aaPredicted RBP21.63■■□□□ 1.05
PSMC4-204ENST00000596386 TAF1LQ8IZX4 1826 aa21.63■■□□□ 1.05
PSMC4-204ENST00000596386 HMGB2P26583 209 aaKnown RBP21.62■■□□□ 1.05
PSMC4-204ENST00000596386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.62■■□□□ 1.051e-6■■■■■ 29.5
PSMC4-204ENST00000596386 GOLGB1Q14789 3259 aaKnown RBP21.62■■□□□ 1.05
PSMC4-204ENST00000596386 TNNT2P45379 298 aaPredicted RBP21.61■■□□□ 1.05
PSMC4-204ENST00000596386 COL23A1Q86Y22 540 aaPredicted RBP21.61■■□□□ 1.05
PSMC4-204ENST00000596386 SMARCC1Q92922 1105 aaPredicted RBP21.61■■□□□ 1.05
PSMC4-204ENST00000596386 PLEKHG2Q9H7P9 1386 aa21.61■■□□□ 1.05
PSMC4-204ENST00000596386 EIF4A2Q14240 407 aaKnown RBP21.6■■□□□ 1.05
PSMC4-204ENST00000596386 PANK3Q9H999 370 aa21.6■■□□□ 1.05
PSMC4-204ENST00000596386 MSH5O43196 834 aa21.59■■□□□ 1.05
PSMC4-204ENST00000596386 KLHL34Q8N239 644 aa21.59■■□□□ 1.05
PSMC4-204ENST00000596386 PIGBQ92521 554 aa21.59■■□□□ 1.05
PSMC4-204ENST00000596386 CHD4Q14839 1912 aa21.59■■□□□ 1.05
PSMC4-204ENST00000596386 C4BP0C0L5 1744 aa21.58■■□□□ 1.05
PSMC4-204ENST00000596386 IGSF1Q8N6C5 1336 aa21.56■■□□□ 1.04
PSMC4-204ENST00000596386 PHKG2P15735 406 aa21.56■■□□□ 1.04
PSMC4-204ENST00000596386 IFNL2Q8IZJ0 200 aa21.56■■□□□ 1.04
PSMC4-204ENST00000596386 FLAD1Q8NFF5 587 aa21.56■■□□□ 1.04
PSMC4-204ENST00000596386 TMOD3Q9NYL9 352 aa21.55■■□□□ 1.04
PSMC4-204ENST00000596386 GPR162Q16538 588 aa21.54■■□□□ 1.04
PSMC4-204ENST00000596386 MSL1Q68DK7 614 aa21.54■■□□□ 1.04
PSMC4-204ENST00000596386 ZNF784Q8NCA9 323 aaPredicted RBP21.53■■□□□ 1.04
PSMC4-204ENST00000596386 NLGN2Q8NFZ4 835 aa21.53■■□□□ 1.04
PSMC4-204ENST00000596386 AK7Q96M32 723 aa21.53■■□□□ 1.04
PSMC4-204ENST00000596386 UBR3Q6ZT12 1888 aa21.53■■□□□ 1.04
PSMC4-204ENST00000596386 LOC102724428A0A0B4J2F2 783 aa21.52■■□□□ 1.04
PSMC4-204ENST00000596386 SIK1P57059 783 aa21.52■■□□□ 1.04
PSMC4-204ENST00000596386 AMIGO3Q86WK7 504 aa21.51■■□□□ 1.03
PSMC4-204ENST00000596386 MORC1Q86VD1 984 aa21.5■■□□□ 1.03
PSMC4-204ENST00000596386 ASAP1Q9ULH1 1129 aa21.5■■□□□ 1.03
PSMC4-204ENST00000596386 LINC00116Q8NCU8 138 aa21.49■■□□□ 1.03
PSMC4-204ENST00000596386 PELP1Q8IZL8 1130 aaKnown RBP21.48■■□□□ 1.03
PSMC4-204ENST00000596386 KNSTRNQ9Y448 316 aa21.48■■□□□ 1.03
PSMC4-204ENST00000596386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.47■■□□□ 1.03
PSMC4-204ENST00000596386 PHF14O94880 888 aa21.47■■□□□ 1.03
PSMC4-204ENST00000596386 SSFA2P28290 1259 aa21.47■■□□□ 1.03
PSMC4-204ENST00000596386 ATG3Q9NT62 314 aa21.47■■□□□ 1.03
PSMC4-204ENST00000596386 HSP90AB1P08238 724 aaKnown RBP21.46■■□□□ 1.03
PSMC4-204ENST00000596386 ITPK1Q13572 414 aa21.46■■□□□ 1.03
PSMC4-204ENST00000596386 PLEKHO1Q53GL0 409 aaPredicted RBP21.46■■□□□ 1.03
PSMC4-204ENST00000596386 DCAF5Q96JK2 942 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms