RNA–Protein interactions for RNA: ENST00000596203.1

LINC00664-201, long intergenic non-protein coding RNA 664, humanhuman

TSL 1 (best) BASIC

Gene LINC00664, Length 1,742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00664-201ENST00000596203 AMOTQ4VCS5 1084 aa16.5■□□□□ 0.23
LINC00664-201ENST00000596203 RTF1Q92541 710 aaKnown RBP16.5■□□□□ 0.23
LINC00664-201ENST00000596203 THUMPD2Q9BTF0 503 aaKnown RBP16.5■□□□□ 0.23
LINC00664-201ENST00000596203 ZNF530Q6P9A1 599 aaPredicted RBP16.49■□□□□ 0.23
LINC00664-201ENST00000596203 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
LINC00664-201ENST00000596203 CCDC9Q9Y3X0 531 aaKnown RBP16.49■□□□□ 0.23
LINC00664-201ENST00000596203 MEGF6O75095 1541 aa16.49■□□□□ 0.23
LINC00664-201ENST00000596203 E9PSI1 815 aa16.48■□□□□ 0.23
LINC00664-201ENST00000596203 SLFN5Q08AF3 891 aa16.48■□□□□ 0.23
LINC00664-201ENST00000596203 MCM10Q7L590 875 aa16.48■□□□□ 0.23
LINC00664-201ENST00000596203 GNAT3A8MTJ3 354 aa16.48■□□□□ 0.23
LINC00664-201ENST00000596203 SLIT2O94813 1529 aa16.47■□□□□ 0.23
LINC00664-201ENST00000596203 MAP3K5Q99683 1374 aa16.47■□□□□ 0.23
LINC00664-201ENST00000596203 IL2RBP14784 551 aa16.47■□□□□ 0.23
LINC00664-201ENST00000596203 C1orf141Q5JVX7 400 aa16.47■□□□□ 0.23
LINC00664-201ENST00000596203 SPG7Q9UQ90 795 aa16.47■□□□□ 0.23
LINC00664-201ENST00000596203 LAS1LQ9Y4W2 734 aaKnown RBP16.47■□□□□ 0.23
LINC00664-201ENST00000596203 NRAPQ86VF7 1730 aa16.47■□□□□ 0.23
LINC00664-201ENST00000596203 CALD1Q05682 793 aaKnown RBP16.46■□□□□ 0.23
LINC00664-201ENST00000596203 UNC5CLQ8IV45 518 aa16.46■□□□□ 0.23
LINC00664-201ENST00000596203 NWD2Q9ULI1 1742 aa16.46■□□□□ 0.23
LINC00664-201ENST00000596203 FBXO41Q8TF61 875 aa16.45■□□□□ 0.22
LINC00664-201ENST00000596203 AKAP4Q5JQC9 854 aa16.45■□□□□ 0.22
LINC00664-201ENST00000596203 DUSP27Q5VZP5 1158 aa16.45■□□□□ 0.22
LINC00664-201ENST00000596203 MYH16Q9H6N6 1097 aa16.45■□□□□ 0.22
LINC00664-201ENST00000596203 HTATSF1O43719 755 aaKnown RBP16.44■□□□□ 0.22
LINC00664-201ENST00000596203 USP21Q9UK80 565 aa16.44■□□□□ 0.22
LINC00664-201ENST00000596203 IL16Q14005 1332 aa16.44■□□□□ 0.22
LINC00664-201ENST00000596203 OVOS2A0A0G2JMS6 1433 aa16.43■□□□□ 0.22
LINC00664-201ENST00000596203 PARP4Q9UKK3 1724 aaKnown RBP16.43■□□□□ 0.22
LINC00664-201ENST00000596203 FNBP4Q8N3X1 1017 aaPredicted RBP16.43■□□□□ 0.22
LINC00664-201ENST00000596203 ZCRB1Q8TBF4 217 aaKnown RBP16.43■□□□□ 0.22
LINC00664-201ENST00000596203 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.43■□□□□ 0.22
LINC00664-201ENST00000596203 SPATA31A1Q5TZJ5 1347 aa16.43■□□□□ 0.22
LINC00664-201ENST00000596203 MPRIPQ6WCQ1 1025 aa16.42■□□□□ 0.22
LINC00664-201ENST00000596203 TRMT2AQ8IZ69 625 aaKnown RBP16.42■□□□□ 0.22
LINC00664-201ENST00000596203 TSR2Q969E8 191 aaKnown RBP16.42■□□□□ 0.22
LINC00664-201ENST00000596203 SPATA31A5Q5VU36 1347 aa16.42■□□□□ 0.22
LINC00664-201ENST00000596203 SPATA31A7Q8IWB4 1347 aa16.42■□□□□ 0.22
LINC00664-201ENST00000596203 BCL9LQ86UU0 1499 aa16.42■□□□□ 0.22
LINC00664-201ENST00000596203 AFF2P51816 1311 aa16.42■□□□□ 0.22
LINC00664-201ENST00000596203 GNAI1P63096 354 aa16.41■□□□□ 0.22
LINC00664-201ENST00000596203 IFNL2Q8IZJ0 200 aa16.41■□□□□ 0.22
LINC00664-201ENST00000596203 IL17REQ8NFR9 667 aa16.41■□□□□ 0.22
LINC00664-201ENST00000596203 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
LINC00664-201ENST00000596203 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
LINC00664-201ENST00000596203 PHKG2P15735 406 aa16.4■□□□□ 0.22
LINC00664-201ENST00000596203 VPS72Q15906 364 aa16.4■□□□□ 0.22
LINC00664-201ENST00000596203 DDX54Q8TDD1 881 aaKnown RBP16.4■□□□□ 0.22
LINC00664-201ENST00000596203 LGR6Q9HBX8 967 aa16.4■□□□□ 0.22
LINC00664-201ENST00000596203 FANCIQ9NVI1 1328 aa16.4■□□□□ 0.22
LINC00664-201ENST00000596203 PKD1L3Q7Z443 1732 aa16.4■□□□□ 0.22
LINC00664-201ENST00000596203 PCDH11XQ9BZA7 1347 aa16.39■□□□□ 0.21
LINC00664-201ENST00000596203 PCDH11YQ9BZA8 1340 aa16.39■□□□□ 0.21
LINC00664-201ENST00000596203 THRAP3Q9Y2W1 955 aaKnown RBP16.39■□□□□ 0.21
LINC00664-201ENST00000596203 CYP27B1O15528 508 aa16.39■□□□□ 0.21
LINC00664-201ENST00000596203 RNMTO43148 476 aaKnown RBP16.39■□□□□ 0.21
LINC00664-201ENST00000596203 CFAP44Q96MT7 982 aa16.39■□□□□ 0.21
LINC00664-201ENST00000596203 MBIPQ9NS73 344 aa16.38■□□□□ 0.21
LINC00664-201ENST00000596203 DISP2A7MBM2 1401 aa16.37■□□□□ 0.21
LINC00664-201ENST00000596203 TEFQ10587 303 aa16.37■□□□□ 0.21
LINC00664-201ENST00000596203 CDCA7Q9BWT1 371 aaPredicted RBP16.37■□□□□ 0.21
LINC00664-201ENST00000596203 MIS18AQ9NYP9 233 aa16.37■□□□□ 0.21
LINC00664-201ENST00000596203 EXOC5O00471 708 aa16.36■□□□□ 0.21
LINC00664-201ENST00000596203 HSP90AB1P08238 724 aaKnown RBP16.36■□□□□ 0.21
LINC00664-201ENST00000596203 ZNF853P0CG23 659 aa16.36■□□□□ 0.21
LINC00664-201ENST00000596203 FAM98CQ17RN3 349 aaKnown RBP16.36■□□□□ 0.21
LINC00664-201ENST00000596203 RCAN3Q9UKA8 241 aa16.36■□□□□ 0.21
LINC00664-201ENST00000596203 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
LINC00664-201ENST00000596203 CEMIPQ8WUJ3 1361 aa16.36■□□□□ 0.21
LINC00664-201ENST00000596203 A0A0G2JS52 829 aa16.36■□□□□ 0.21
LINC00664-201ENST00000596203 MYT1Q01538 1121 aa16.36■□□□□ 0.21
LINC00664-201ENST00000596203 EXOSC9Q06265 439 aaKnown RBP16.36■□□□□ 0.21
LINC00664-201ENST00000596203 TSPYL4Q9UJ04 414 aa16.36■□□□□ 0.21
LINC00664-201ENST00000596203 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.36■□□□□ 0.21
LINC00664-201ENST00000596203 WNK3Q9BYP7 1800 aa16.35■□□□□ 0.21
LINC00664-201ENST00000596203 CHL1O00533 1208 aa16.35■□□□□ 0.21
LINC00664-201ENST00000596203 TAF7Q15545 349 aaPredicted RBP16.35■□□□□ 0.21
LINC00664-201ENST00000596203 BARGINQ6ZT62 677 aa16.35■□□□□ 0.21
LINC00664-201ENST00000596203 LRRC37A3O60309 1634 aa16.35■□□□□ 0.21
LINC00664-201ENST00000596203 DDB1Q16531 1140 aa16.34■□□□□ 0.21
LINC00664-201ENST00000596203 DCAF5Q96JK2 942 aa16.34■□□□□ 0.21
LINC00664-201ENST00000596203 KDM6AO15550 1401 aaPredicted RBP16.33■□□□□ 0.21
LINC00664-201ENST00000596203 TRPC5Q9UL62 973 aaPredicted RBP16.33■□□□□ 0.21
LINC00664-201ENST00000596203 VIRMAQ69YN4 1812 aaKnown RBP16.33■□□□□ 0.21
LINC00664-201ENST00000596203 SHANK3Q9BYB0 1731 aa16.33■□□□□ 0.2
LINC00664-201ENST00000596203 GJD4Q96KN9 370 aaPredicted RBP16.32■□□□□ 0.2
LINC00664-201ENST00000596203 QTRT2Q9H974 415 aaKnown RBP16.32■□□□□ 0.2
LINC00664-201ENST00000596203 TNS2Q63HR2 1409 aa16.31■□□□□ 0.2
LINC00664-201ENST00000596203 BTBD11A6QL63 1104 aa16.31■□□□□ 0.2
LINC00664-201ENST00000596203 ELL2O00472 640 aaPredicted RBP16.31■□□□□ 0.2
LINC00664-201ENST00000596203 SCN11AQ9UI33 1791 aa16.31■□□□□ 0.2
LINC00664-201ENST00000596203 ATRNO75882 1429 aa16.31■□□□□ 0.2
LINC00664-201ENST00000596203 CABP4P57796 275 aa16.31■□□□□ 0.2
LINC00664-201ENST00000596203 SLC52A2Q9HAB3 445 aa16.31■□□□□ 0.2
LINC00664-201ENST00000596203 NFATC2IPQ8NCF5 419 aa16.3■□□□□ 0.2
LINC00664-201ENST00000596203 ADAMTS7Q9UKP4 1686 aa16.29■□□□□ 0.2
LINC00664-201ENST00000596203 NKX1-1Q15270 411 aaPredicted RBP16.29■□□□□ 0.2
LINC00664-201ENST00000596203 KRT24Q2M2I5 525 aa16.29■□□□□ 0.2
LINC00664-201ENST00000596203 TSPYL6Q8N831 410 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms