RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 ARHGEF25Q86VW2 580 aa17.28■□□□□ 0.36
SHKBP1-209ENST00000595803 CCDC146Q8IYE0 955 aa17.28■□□□□ 0.36
SHKBP1-209ENST00000595803 PDGFDQ9GZP0 370 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-209ENST00000595803 COL3A1P02461 1466 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-209ENST00000595803 SLIT3O75094 1523 aa17.27■□□□□ 0.36
SHKBP1-209ENST00000595803 RUNDC1Q96C34 613 aa17.27■□□□□ 0.36
SHKBP1-209ENST00000595803 FHDC1Q9C0D6 1143 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-209ENST00000595803 SYT17Q9BSW7 474 aa17.26■□□□□ 0.35
SHKBP1-209ENST00000595803 STRN4Q9NRL3 753 aa17.26■□□□□ 0.35
SHKBP1-209ENST00000595803 USP35Q9P2H5 1018 aa17.26■□□□□ 0.35
SHKBP1-209ENST00000595803 FCHSD2O94868 740 aa17.25■□□□□ 0.35
SHKBP1-209ENST00000595803 NEFMP07197 916 aa17.25■□□□□ 0.35
SHKBP1-209ENST00000595803 LTV1Q96GA3 475 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-209ENST00000595803 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-209ENST00000595803 NFAT5O94916 1531 aa17.25■□□□□ 0.35
SHKBP1-209ENST00000595803 RTL1A6NKG5 1358 aa17.25■□□□□ 0.35
SHKBP1-209ENST00000595803 BARGINQ6ZT62 677 aa17.24■□□□□ 0.35
SHKBP1-209ENST00000595803 KIAA0232Q92628 1395 aa17.24■□□□□ 0.35
SHKBP1-209ENST00000595803 ZBED9Q6R2W3 1325 aa17.23■□□□□ 0.35
SHKBP1-209ENST00000595803 APAF1O14727 1248 aa17.23■□□□□ 0.35
SHKBP1-209ENST00000595803 CHRNA2Q15822 529 aa17.23■□□□□ 0.35
SHKBP1-209ENST00000595803 PEAK1Q9H792 1746 aa17.23■□□□□ 0.35
SHKBP1-209ENST00000595803 PHRF1Q9P1Y6 1649 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-209ENST00000595803 HMOX1P09601 288 aa17.22■□□□□ 0.35
SHKBP1-209ENST00000595803 ATF5Q9Y2D1 282 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-209ENST00000595803 MAPK8IP3Q9UPT6 1336 aa17.21■□□□□ 0.35
SHKBP1-209ENST00000595803 SULT6B1Q6IMI4 303 aa17.21■□□□□ 0.35
SHKBP1-209ENST00000595803 NGEFQ8N5V2 710 aa17.21■□□□□ 0.35
SHKBP1-209ENST00000595803 LTN1O94822 1766 aa17.2■□□□□ 0.34
SHKBP1-209ENST00000595803 PRKAR2BP31323 418 aa17.2■□□□□ 0.34
SHKBP1-209ENST00000595803 TCP11L2Q8N4U5 519 aa17.2■□□□□ 0.34
SHKBP1-209ENST00000595803 PLEKHF1Q96S99 279 aa17.2■□□□□ 0.34
SHKBP1-209ENST00000595803 EYA1Q99502 592 aa17.2■□□□□ 0.34
SHKBP1-209ENST00000595803 RSPH6AQ9H0K4 717 aa17.2■□□□□ 0.34
SHKBP1-209ENST00000595803 PARP4Q9UKK3 1724 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-209ENST00000595803 SHANK3Q9BYB0 1731 aa17.19■□□□□ 0.34
SHKBP1-209ENST00000595803 OVOS2A0A0G2JMS6 1433 aa17.19■□□□□ 0.34
SHKBP1-209ENST00000595803 GOLGB1Q14789 3259 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-209ENST00000595803 CPDO75976 1380 aa17.18■□□□□ 0.34
SHKBP1-209ENST00000595803 PLSCR1O15162 318 aa17.18■□□□□ 0.34
SHKBP1-209ENST00000595803 ANKRD24Q8TF21 1146 aa17.18■□□□□ 0.34
SHKBP1-209ENST00000595803 AXIN2Q9Y2T1 843 aa17.18■□□□□ 0.34
SHKBP1-209ENST00000595803 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
SHKBP1-209ENST00000595803 BCL11BQ9C0K0 894 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-209ENST00000595803 SBF2Q86WG5 1849 aa17.17■□□□□ 0.34
SHKBP1-209ENST00000595803 SGIP1Q9BQI5 828 aa17.16■□□□□ 0.34
SHKBP1-209ENST00000595803 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
SHKBP1-209ENST00000595803 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-209ENST00000595803 LARP1Q6PKG0 1096 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-209ENST00000595803 AEBP1Q8IUX7 1158 aa17.15■□□□□ 0.34
SHKBP1-209ENST00000595803 RRP7AQ9Y3A4 280 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-209ENST00000595803 IGSF1Q8N6C5 1336 aa17.15■□□□□ 0.34
SHKBP1-209ENST00000595803 MAP3K5Q99683 1374 aa17.15■□□□□ 0.34
SHKBP1-209ENST00000595803 TMPOP42166 694 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-209ENST00000595803 NBPF6Q5VWK0 638 aa17.14■□□□□ 0.33
SHKBP1-209ENST00000595803 NBPF4Q96M43 638 aa17.14■□□□□ 0.33
SHKBP1-209ENST00000595803 LMO7Q8WWI1 1683 aa17.13■□□□□ 0.33
SHKBP1-209ENST00000595803 RIPK4P57078 832 aa17.13■□□□□ 0.33
SHKBP1-209ENST00000595803 EVA1CP58658 441 aa17.13■□□□□ 0.33
SHKBP1-209ENST00000595803 PHACTR3Q96KR7 559 aa17.13■□□□□ 0.33
SHKBP1-209ENST00000595803 MTFR1LQ9H019 292 aa17.13■□□□□ 0.33
SHKBP1-209ENST00000595803 LRRC37A3O60309 1634 aa17.13■□□□□ 0.33
SHKBP1-209ENST00000595803 GPR162Q16538 588 aa17.12■□□□□ 0.33
SHKBP1-209ENST00000595803 PTF1AQ7RTS3 328 aa17.12■□□□□ 0.33
SHKBP1-209ENST00000595803 PROM2Q8N271 834 aa17.12■□□□□ 0.33
SHKBP1-209ENST00000595803 NFE2L2Q16236 605 aa17.11■□□□□ 0.33
SHKBP1-209ENST00000595803 CCDC27Q2M243 656 aa17.11■□□□□ 0.33
SHKBP1-209ENST00000595803 USHBP1Q8N6Y0 703 aa17.11■□□□□ 0.33
SHKBP1-209ENST00000595803 NLRP2Q9NX02 1062 aa17.11■□□□□ 0.33
SHKBP1-209ENST00000595803 STK32BQ9NY57 414 aa17.11■□□□□ 0.33
SHKBP1-209ENST00000595803 GOLGA2Q08379 1002 aa17.1■□□□□ 0.33
SHKBP1-209ENST00000595803 WWC1Q8IX03 1113 aa17.1■□□□□ 0.33
SHKBP1-209ENST00000595803 ARXQ96QS3 562 aa17.1■□□□□ 0.33
SHKBP1-209ENST00000595803 THRAP3Q9Y2W1 955 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-209ENST00000595803 ERBB3P21860 1342 aa17.1■□□□□ 0.33
SHKBP1-209ENST00000595803 COL18A1P39060 1754 aa17.1■□□□□ 0.33
SHKBP1-209ENST00000595803 ABCC6O95255 1503 aa17.09■□□□□ 0.33
SHKBP1-209ENST00000595803 RGPD5Q99666 1765 aa17.08■□□□□ 0.33
SHKBP1-209ENST00000595803 KDRP35968 1356 aa17.08■□□□□ 0.32
SHKBP1-209ENST00000595803 SLC15A2Q16348 729 aa17.08■□□□□ 0.32
SHKBP1-209ENST00000595803 WDR63Q8IWG1 891 aa17.08■□□□□ 0.32
SHKBP1-209ENST00000595803 ZNF521Q96K83 1311 aa17.07■□□□□ 0.32
SHKBP1-209ENST00000595803 LMOD3Q0VAK6 560 aa17.07■□□□□ 0.32
SHKBP1-209ENST00000595803 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
SHKBP1-209ENST00000595803 GAS2L2Q8NHY3 880 aa17.07■□□□□ 0.32
SHKBP1-209ENST00000595803 CDCA7LQ96GN5 454 aa17.07■□□□□ 0.32
SHKBP1-209ENST00000595803 COL5A2P05997 1499 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-209ENST00000595803 MTHFSDQ2M296 383 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-209ENST00000595803 PLEKHO1Q53GL0 409 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-209ENST00000595803 TRIM35Q9UPQ4 493 aa17.06■□□□□ 0.32
SHKBP1-209ENST00000595803 WDR17Q8IZU2 1322 aa17.05■□□□□ 0.32
SHKBP1-209ENST00000595803 E9PSI1 815 aa17.04■□□□□ 0.32
SHKBP1-209ENST00000595803 HSPA6P17066 643 aa17.04■□□□□ 0.32
SHKBP1-209ENST00000595803 SLFN5Q08AF3 891 aa17.04■□□□□ 0.32
SHKBP1-209ENST00000595803 TXNRD1Q16881 649 aa17.04■□□□□ 0.32
SHKBP1-209ENST00000595803 AMOTQ4VCS5 1084 aa17.04■□□□□ 0.32
SHKBP1-209ENST00000595803 PELP1Q8IZL8 1130 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-209ENST00000595803 RAPGEF4Q8WZA2 1011 aa17.04■□□□□ 0.32
SHKBP1-209ENST00000595803 CRB1P82279 1406 aa17.04■□□□□ 0.32
SHKBP1-209ENST00000595803 RGPD2P0DJD1 1756 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms