RNA–Protein interactions for RNA: ENST00000595770.1

ARHGEF1-212, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-212ENST00000595770 ZCRB1Q8TBF4 217 aaKnown RBP19.86■□□□□ 0.77
ARHGEF1-212ENST00000595770 SRCAPQ6ZRS2 3230 aa19.86■□□□□ 0.77
ARHGEF1-212ENST00000595770 NSD2O96028 1365 aa19.85■□□□□ 0.77
ARHGEF1-212ENST00000595770 TNNT2P45379 298 aaPredicted RBP19.84■□□□□ 0.77
ARHGEF1-212ENST00000595770 RAPGEF4Q8WZA2 1011 aa19.84■□□□□ 0.77
ARHGEF1-212ENST00000595770 SHANK3Q9BYB0 1731 aa19.84■□□□□ 0.77
ARHGEF1-212ENST00000595770 LRP5O75197 1615 aa19.83■□□□□ 0.76
ARHGEF1-212ENST00000595770 TATP17735 454 aaPredicted RBP19.82■□□□□ 0.76
ARHGEF1-212ENST00000595770 TXNRD1Q16881 649 aa19.82■□□□□ 0.76
ARHGEF1-212ENST00000595770 KNSTRNQ9Y448 316 aa19.82■□□□□ 0.76
ARHGEF1-212ENST00000595770 NCAPD2Q15021 1401 aa19.82■□□□□ 0.76
ARHGEF1-212ENST00000595770 KAT6BQ8WYB5 2073 aa19.81■□□□□ 0.76
ARHGEF1-212ENST00000595770 BTAF1O14981 1849 aa19.8■□□□□ 0.76
ARHGEF1-212ENST00000595770 MORC1Q86VD1 984 aa19.79■□□□□ 0.76
ARHGEF1-212ENST00000595770 EYA1Q99502 592 aa19.79■□□□□ 0.76
ARHGEF1-212ENST00000595770 ANO8Q9HCE9 1232 aaPredicted RBP19.79■□□□□ 0.76
ARHGEF1-212ENST00000595770 AMER1Q5JTC6 1135 aaPredicted RBP19.78■□□□□ 0.76
ARHGEF1-212ENST00000595770 PRIM1P49642 420 aaKnown RBP19.77■□□□□ 0.76
ARHGEF1-212ENST00000595770 EIF4A2Q14240 407 aaKnown RBP19.77■□□□□ 0.76
ARHGEF1-212ENST00000595770 PER1O15534 1290 aaPredicted RBP19.76■□□□□ 0.75
ARHGEF1-212ENST00000595770 DOT1LQ8TEK3 1739 aa19.76■□□□□ 0.75
ARHGEF1-212ENST00000595770 PCDH11XQ9BZA7 1347 aa19.76■□□□□ 0.75
ARHGEF1-212ENST00000595770 PCDH11YQ9BZA8 1340 aa19.76■□□□□ 0.75
ARHGEF1-212ENST00000595770 SYTL4Q96C24 671 aaPredicted RBP19.75■□□□□ 0.75
ARHGEF1-212ENST00000595770 CYP27B1O15528 508 aa19.74■□□□□ 0.75
ARHGEF1-212ENST00000595770 PKD1L3Q7Z443 1732 aa19.73■□□□□ 0.75
ARHGEF1-212ENST00000595770 SLC15A2Q16348 729 aa19.72■□□□□ 0.75
ARHGEF1-212ENST00000595770 STK32BQ9NY57 414 aa19.72■□□□□ 0.75
ARHGEF1-212ENST00000595770 LRRC4BQ9NT99 713 aa19.71■□□□□ 0.75
ARHGEF1-212ENST00000595770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.71■□□□□ 0.75
ARHGEF1-212ENST00000595770 SPG7Q9UQ90 795 aa19.71■□□□□ 0.75
ARHGEF1-212ENST00000595770 IGSF1Q8N6C5 1336 aa19.71■□□□□ 0.75
ARHGEF1-212ENST00000595770 PAPPAQ13219 1627 aa19.7■□□□□ 0.74
ARHGEF1-212ENST00000595770 NKX1-1Q15270 411 aaPredicted RBP19.69■□□□□ 0.74
ARHGEF1-212ENST00000595770 SLC27A3Q5K4L6 730 aa19.69■□□□□ 0.74
ARHGEF1-212ENST00000595770 PDGFDQ9GZP0 370 aaPredicted RBP19.69■□□□□ 0.74
ARHGEF1-212ENST00000595770 CASZ1Q86V15 1759 aa19.69■□□□□ 0.74
ARHGEF1-212ENST00000595770 CC2D1BQ5T0F9 858 aaKnown RBP19.67■□□□□ 0.74
ARHGEF1-212ENST00000595770 SPON1Q9HCB6 807 aa19.67■□□□□ 0.74
ARHGEF1-212ENST00000595770 LY75O60449 1722 aa19.67■□□□□ 0.74
ARHGEF1-212ENST00000595770 PLEKHG2Q9H7P9 1386 aa19.67■□□□□ 0.74
ARHGEF1-212ENST00000595770 NPC1L1Q9UHC9 1359 aa19.66■□□□□ 0.74
ARHGEF1-212ENST00000595770 TOGARAM1Q9Y4F4 1720 aa19.65■□□□□ 0.74
ARHGEF1-212ENST00000595770 IL13P35225 146 aa19.65■□□□□ 0.74
ARHGEF1-212ENST00000595770 KCNQ4P56696 695 aa19.65■□□□□ 0.74
ARHGEF1-212ENST00000595770 ZNF827Q17R98 1081 aa19.65■□□□□ 0.74
ARHGEF1-212ENST00000595770 PHKG2P15735 406 aa19.64■□□□□ 0.73
ARHGEF1-212ENST00000595770 MTHFSP49914 203 aa19.64■□□□□ 0.73
ARHGEF1-212ENST00000595770 IFNL2Q8IZJ0 200 aa19.64■□□□□ 0.73
ARHGEF1-212ENST00000595770 AKT1S1Q96B36 256 aa19.64■□□□□ 0.73
ARHGEF1-212ENST00000595770 ITGB4P16144 1822 aa19.63■□□□□ 0.73
ARHGEF1-212ENST00000595770 MPRIPQ6WCQ1 1025 aa19.63■□□□□ 0.73
ARHGEF1-212ENST00000595770 ZBTB7AO95365 584 aa19.62■□□□□ 0.73
ARHGEF1-212ENST00000595770 AEBP1Q8IUX7 1158 aa19.62■□□□□ 0.73
ARHGEF1-212ENST00000595770 CCNL1Q9UK58 526 aaPredicted RBP19.62■□□□□ 0.73
ARHGEF1-212ENST00000595770 PLEKHO1Q53GL0 409 aaPredicted RBP19.61■□□□□ 0.73
ARHGEF1-212ENST00000595770 PIGBQ92521 554 aa19.61■□□□□ 0.73
ARHGEF1-212ENST00000595770 SULT6B1Q6IMI4 303 aa19.6■□□□□ 0.73
ARHGEF1-212ENST00000595770 KDRP35968 1356 aa19.59■□□□□ 0.73
ARHGEF1-212ENST00000595770 PALLDQ8WX93 1383 aa19.59■□□□□ 0.73
ARHGEF1-212ENST00000595770 AMOTQ4VCS5 1084 aa19.59■□□□□ 0.73
ARHGEF1-212ENST00000595770 ATF5Q9Y2D1 282 aaPredicted RBP19.59■□□□□ 0.73
ARHGEF1-212ENST00000595770 PTGER2P43116 358 aa19.58■□□□□ 0.72
ARHGEF1-212ENST00000595770 CNGB1Q14028 1251 aaPredicted RBP19.58■□□□□ 0.72
ARHGEF1-212ENST00000595770 SMARCC1Q92922 1105 aaPredicted RBP19.58■□□□□ 0.72
ARHGEF1-212ENST00000595770 MTFR1LQ9H019 292 aa19.58■□□□□ 0.72
ARHGEF1-212ENST00000595770 PPP1R1BQ9UD71 204 aaPredicted RBP19.58■□□□□ 0.72
ARHGEF1-212ENST00000595770 QSER1Q2KHR3 1735 aa19.57■□□□□ 0.72
ARHGEF1-212ENST00000595770 TMOD3Q9NYL9 352 aa19.57■□□□□ 0.72
ARHGEF1-212ENST00000595770 ZNF530Q6P9A1 599 aaPredicted RBP19.56■□□□□ 0.72
ARHGEF1-212ENST00000595770 TFCP2L1Q9NZI6 479 aa19.56■□□□□ 0.72
ARHGEF1-212ENST00000595770 PNPLA7Q6ZV29 1317 aa19.55■□□□□ 0.72
ARHGEF1-212ENST00000595770 DIAPH1O60610 1272 aaKnown RBP19.55■□□□□ 0.72
ARHGEF1-212ENST00000595770 HSP90AB1P08238 724 aaKnown RBP19.55■□□□□ 0.72
ARHGEF1-212ENST00000595770 DCAF5Q96JK2 942 aa19.55■□□□□ 0.72
ARHGEF1-212ENST00000595770 SGIP1Q9BQI5 828 aa19.55■□□□□ 0.72
ARHGEF1-212ENST00000595770 TUBGCP6Q96RT7 1819 aa19.55■□□□□ 0.72
ARHGEF1-212ENST00000595770 ERVV-2B6SEH9 535 aa19.54■□□□□ 0.72
ARHGEF1-212ENST00000595770 HMGB2P26583 209 aaKnown RBP19.54■□□□□ 0.72
ARHGEF1-212ENST00000595770 ASAP1Q9ULH1 1129 aa19.54■□□□□ 0.72
ARHGEF1-212ENST00000595770 C5P01031 1676 aa19.53■□□□□ 0.72
ARHGEF1-212ENST00000595770 SLC16A10Q8TF71 515 aa19.53■□□□□ 0.72
ARHGEF1-212ENST00000595770 TAF1LQ8IZX4 1826 aa19.53■□□□□ 0.72
ARHGEF1-212ENST00000595770 KDM6AO15550 1401 aaPredicted RBP19.52■□□□□ 0.72
ARHGEF1-212ENST00000595770 ATG3Q9NT62 314 aa19.52■□□□□ 0.72
ARHGEF1-212ENST00000595770 COL3A1P02461 1466 aaPredicted RBP19.52■□□□□ 0.72
ARHGEF1-212ENST00000595770 LOC102724428A0A0B4J2F2 783 aa19.51■□□□□ 0.71
ARHGEF1-212ENST00000595770 HMOX1P09601 288 aa19.51■□□□□ 0.71
ARHGEF1-212ENST00000595770 SIK1P57059 783 aa19.51■□□□□ 0.71
ARHGEF1-212ENST00000595770 C1orf141Q5JVX7 400 aa19.51■□□□□ 0.71
ARHGEF1-212ENST00000595770 COL23A1Q86Y22 540 aaPredicted RBP19.49■□□□□ 0.71
ARHGEF1-212ENST00000595770 C4BP0C0L5 1744 aa19.48■□□□□ 0.71
ARHGEF1-212ENST00000595770 COL24A1Q17RW2 1714 aa19.48■□□□□ 0.71
ARHGEF1-212ENST00000595770 CABP4P57796 275 aa19.47■□□□□ 0.71
ARHGEF1-212ENST00000595770 AKAP4Q5JQC9 854 aa19.47■□□□□ 0.71
ARHGEF1-212ENST00000595770 PPP2R1AP30153 589 aa19.46■□□□□ 0.71
ARHGEF1-212ENST00000595770 ATP6V1AP38606 617 aa19.46■□□□□ 0.71
ARHGEF1-212ENST00000595770 ITPK1Q13572 414 aa19.46■□□□□ 0.71
ARHGEF1-212ENST00000595770 LINC00116Q8NCU8 138 aa19.46■□□□□ 0.71
ARHGEF1-212ENST00000595770 ARXQ96QS3 562 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms