RNA–Protein interactions for RNA: ENST00000595437.5

FARP1-214, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene FARP1, Length 4,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-214ENST00000595437 KIF6Q6ZMV9 814 aa18.22■□□□□ 0.51
FARP1-214ENST00000595437 MLH3Q9UHC1 1453 aa18.22■□□□□ 0.51
FARP1-214ENST00000595437 ANKRD1Q15327 319 aa18.22■□□□□ 0.51
FARP1-214ENST00000595437 RALYLQ86SE5 291 aaKnown RBP18.22■□□□□ 0.51
FARP1-214ENST00000595437 BECN2A8MW95 431 aa18.22■□□□□ 0.51
FARP1-214ENST00000595437 APPP05067 770 aa18.22■□□□□ 0.51
FARP1-214ENST00000595437 CYP46A1Q9Y6A2 500 aa18.22■□□□□ 0.51
FARP1-214ENST00000595437 IQGAP3Q86VI3 1631 aa18.21■□□□□ 0.51
FARP1-214ENST00000595437 NASPP49321 788 aaPredicted RBP18.21■□□□□ 0.51
FARP1-214ENST00000595437 MRPL50Q8N5N7 158 aaKnown RBP18.21■□□□□ 0.51
FARP1-214ENST00000595437 BICD2Q8TD16 824 aa18.21■□□□□ 0.51
FARP1-214ENST00000595437 EDC4Q6P2E9 1401 aaKnown RBP18.21■□□□□ 0.51
FARP1-214ENST00000595437 WDR33Q9C0J8 1336 aaKnown RBP18.21■□□□□ 0.51
FARP1-214ENST00000595437 FAM83GA6ND36 823 aa18.21■□□□□ 0.51
FARP1-214ENST00000595437 TOM1L2Q6ZVM7 507 aa18.21■□□□□ 0.51
FARP1-214ENST00000595437 SHROOM2Q13796 1616 aa18.21■□□□□ 0.51
FARP1-214ENST00000595437 PDIA4P13667 645 aaKnown RBP18.2■□□□□ 0.5
FARP1-214ENST00000595437 PRDM11Q9NQV5 511 aa18.2■□□□□ 0.5
FARP1-214ENST00000595437 GLRX3O76003 335 aaKnown RBP18.2■□□□□ 0.5
FARP1-214ENST00000595437 EIF4A2Q14240 407 aaKnown RBP18.2■□□□□ 0.5
FARP1-214ENST00000595437 HSP90AB2PQ58FF8 381 aa18.2■□□□□ 0.5
FARP1-214ENST00000595437 TBC1D2Q9BYX2 928 aa18.2■□□□□ 0.5
FARP1-214ENST00000595437 DBF4Q9UBU7 674 aaPredicted RBP18.2■□□□□ 0.5
FARP1-214ENST00000595437 PLA2R1Q13018 1463 aa18.2■□□□□ 0.5
FARP1-214ENST00000595437 AEBP1Q8IUX7 1158 aa18.19■□□□□ 0.5
FARP1-214ENST00000595437 IL1RAPL2Q9NP60 686 aa18.19■□□□□ 0.5
FARP1-214ENST00000595437 WASHC4Q2M389 1173 aa18.19■□□□□ 0.5
FARP1-214ENST00000595437 LARP1Q6PKG0 1096 aaKnown RBP18.19■□□□□ 0.5
FARP1-214ENST00000595437 FLT4P35916 1363 aa18.19■□□□□ 0.5
FARP1-214ENST00000595437 PIK3R4Q99570 1358 aa18.19■□□□□ 0.5
FARP1-214ENST00000595437 MAGI2Q86UL8 1455 aa18.19■□□□□ 0.5
FARP1-214ENST00000595437 DNAAF4Q8WXU2 420 aa18.19■□□□□ 0.5
FARP1-214ENST00000595437 AACSQ86V21 672 aa18.19■□□□□ 0.5
FARP1-214ENST00000595437 IL27Q8NEV9 243 aa18.19■□□□□ 0.5
FARP1-214ENST00000595437 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
FARP1-214ENST00000595437 FBLN1P23142 703 aa18.18■□□□□ 0.5
FARP1-214ENST00000595437 CROCC2H7BZ55 1655 aa18.18■□□□□ 0.5
FARP1-214ENST00000595437 ZC3H6P61129 1189 aaKnown RBP18.18■□□□□ 0.5
FARP1-214ENST00000595437 C8orf34Q49A92 452 aa18.18■□□□□ 0.5
FARP1-214ENST00000595437 XPCQ01831 940 aaPredicted RBP18.18■□□□□ 0.5
FARP1-214ENST00000595437 CAVIN1Q6NZI2 390 aaKnown RBP18.18■□□□□ 0.5
FARP1-214ENST00000595437 F6X3S4 739 aa18.18■□□□□ 0.5
FARP1-214ENST00000595437 PRPF40AO75400 957 aaKnown RBP18.18■□□□□ 0.5
FARP1-214ENST00000595437 ZSCAN31Q96LW9 406 aaPredicted RBP18.17■□□□□ 0.5
FARP1-214ENST00000595437 DNAJC2Q99543 621 aaKnown RBP18.17■□□□□ 0.5
FARP1-214ENST00000595437 ZFYVE16Q7Z3T8 1539 aa18.17■□□□□ 0.5
FARP1-214ENST00000595437 VAMP4O75379 141 aa18.17■□□□□ 0.5
FARP1-214ENST00000595437 MYL6BP14649 208 aa18.17■□□□□ 0.5
FARP1-214ENST00000595437 HYPKQ9NX55 129 aa18.17■□□□□ 0.5
FARP1-214ENST00000595437 TBX22Q9Y458 520 aa18.17■□□□□ 0.5
FARP1-214ENST00000595437 UNC13BO14795 1591 aa18.17■□□□□ 0.5
FARP1-214ENST00000595437 CCDC73Q6ZRK6 1079 aa18.16■□□□□ 0.5
FARP1-214ENST00000595437 FOXO3O43524 673 aa18.16■□□□□ 0.5
FARP1-214ENST00000595437 RLBP1P12271 317 aa18.16■□□□□ 0.5
FARP1-214ENST00000595437 CCDC158Q5M9N0 1113 aa18.16■□□□□ 0.5
FARP1-214ENST00000595437 USHBP1Q8N6Y0 703 aa18.16■□□□□ 0.5
FARP1-214ENST00000595437 ERVK-7P63135 1459 aa18.16■□□□□ 0.5
FARP1-214ENST00000595437 TET3O43151 1660 aa18.16■□□□□ 0.5
FARP1-214ENST00000595437 TBC1D2BQ9UPU7 963 aa18.16■□□□□ 0.5
FARP1-214ENST00000595437 SMARCA5O60264 1052 aaPredicted RBP18.15■□□□□ 0.5
FARP1-214ENST00000595437 SASS6Q6UVJ0 657 aa18.15■□□□□ 0.5
FARP1-214ENST00000595437 TBC1D9Q6ZT07 1266 aa18.15■□□□□ 0.5
FARP1-214ENST00000595437 ANKRD44Q8N8A2 993 aa18.15■□□□□ 0.5
FARP1-214ENST00000595437 ERICH2A1L162 156 aa18.15■□□□□ 0.5
FARP1-214ENST00000595437 SMC5Q8IY18 1101 aa18.15■□□□□ 0.5
FARP1-214ENST00000595437 LRRFIP2Q9Y608 721 aaKnown RBP18.15■□□□□ 0.5
FARP1-214ENST00000595437 VPS37DQ86XT2 251 aa18.15■□□□□ 0.5
FARP1-214ENST00000595437 AMOTL1Q8IY63 956 aa18.15■□□□□ 0.5
FARP1-214ENST00000595437 C8orf58Q8NAV2 365 aa18.15■□□□□ 0.5
FARP1-214ENST00000595437 SIRT1Q96EB6 747 aa18.15■□□□□ 0.5
FARP1-214ENST00000595437 STRN4Q9NRL3 753 aa18.15■□□□□ 0.5
FARP1-214ENST00000595437 SOS1Q07889 1333 aaPredicted RBP18.14■□□□□ 0.49
FARP1-214ENST00000595437 KRT32Q14532 448 aa18.14■□□□□ 0.49
FARP1-214ENST00000595437 SIL1Q9H173 461 aa18.14■□□□□ 0.49
FARP1-214ENST00000595437 ZBTB40Q9NUA8 1239 aa18.14■□□□□ 0.49
FARP1-214ENST00000595437 KDM2BQ8NHM5 1336 aa18.14■□□□□ 0.49
FARP1-214ENST00000595437 TTC22Q5TAA0 569 aa18.14■□□□□ 0.49
FARP1-214ENST00000595437 NFXL1Q6ZNB6 911 aa18.13■□□□□ 0.49
FARP1-214ENST00000595437 RASSF8Q8NHQ8 419 aa18.13■□□□□ 0.49
FARP1-214ENST00000595437 NOL10Q9BSC4 688 aaKnown RBP18.13■□□□□ 0.49
FARP1-214ENST00000595437 DHX16O60231 1041 aaKnown RBP18.13■□□□□ 0.49
FARP1-214ENST00000595437 CCDC173Q0VFZ6 552 aa18.13■□□□□ 0.49
FARP1-214ENST00000595437 HOOK1Q9UJC3 728 aaKnown RBP18.13■□□□□ 0.49
FARP1-214ENST00000595437 NUTM1Q86Y26 1132 aa18.12■□□□□ 0.49
FARP1-214ENST00000595437 ZRANB1Q9UGI0 708 aa18.12■□□□□ 0.49
FARP1-214ENST00000595437 RBM42Q9BTD8 480 aaKnown RBP18.12■□□□□ 0.49
FARP1-214ENST00000595437 BLOC1S2Q6QNY1 142 aa18.12■□□□□ 0.49
FARP1-214ENST00000595437 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.12■□□□□ 0.49
FARP1-214ENST00000595437 PHACTR3Q96KR7 559 aa18.12■□□□□ 0.49
FARP1-214ENST00000595437 CWC27Q6UX04 472 aaKnown RBP18.12■□□□□ 0.49
FARP1-214ENST00000595437 MPRIPQ6WCQ1 1025 aa18.12■□□□□ 0.49
FARP1-214ENST00000595437 SAFBQ15424 915 aaKnown RBP eCLIP18.11■□□□□ 0.495e-8■■■□□ 16.1
FARP1-214ENST00000595437 CCDC39Q9UFE4 941 aa18.11■□□□□ 0.49
FARP1-214ENST00000595437 KIF1BO60333 1816 aa18.11■□□□□ 0.49
FARP1-214ENST00000595437 KRT28Q7Z3Y7 464 aa18.11■□□□□ 0.49
FARP1-214ENST00000595437 FAM43AQ8N2R8 423 aa18.11■□□□□ 0.49
FARP1-214ENST00000595437 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.11■□□□□ 0.49
FARP1-214ENST00000595437 MAP4K4O95819 1239 aaPredicted RBP18.11■□□□□ 0.49
FARP1-214ENST00000595437 DDX54Q8TDD1 881 aaKnown RBP18.11■□□□□ 0.49
FARP1-214ENST00000595437 G3V3G9 751 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms