RNA–Protein interactions for RNA: ENST00000594497.1

CAPN12-203, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-203ENST00000594497 PTGER2P43116 358 aa22.5■■□□□ 1.19
CAPN12-203ENST00000594497 LY75O60449 1722 aa22.5■■□□□ 1.19
CAPN12-203ENST00000594497 INSRP06213 1382 aa22.5■■□□□ 1.19
CAPN12-203ENST00000594497 FLT4P35916 1363 aa22.5■■□□□ 1.19
CAPN12-203ENST00000594497 NSD3Q9BZ95 1437 aa22.49■■□□□ 1.19
CAPN12-203ENST00000594497 DCAF8L1A6NGE4 600 aa22.49■■□□□ 1.19
CAPN12-203ENST00000594497 SYTL4Q96C24 671 aaPredicted RBP22.49■■□□□ 1.19
CAPN12-203ENST00000594497 CARD14Q9BXL6 1004 aa22.49■■□□□ 1.19
CAPN12-203ENST00000594497 MTFR1LQ9H019 292 aa22.49■■□□□ 1.19
CAPN12-203ENST00000594497 CGNL1Q0VF96 1302 aa22.49■■□□□ 1.19
CAPN12-203ENST00000594497 SLC27A3Q5K4L6 730 aa22.48■■□□□ 1.19
CAPN12-203ENST00000594497 LRRC4BQ9NT99 713 aa22.48■■□□□ 1.19
CAPN12-203ENST00000594497 PRIM1P49642 420 aaKnown RBP22.47■■□□□ 1.19
CAPN12-203ENST00000594497 ZNF827Q17R98 1081 aa22.47■■□□□ 1.19
CAPN12-203ENST00000594497 HSP90AB2PQ58FF8 381 aa22.47■■□□□ 1.19
CAPN12-203ENST00000594497 USHBP1Q8N6Y0 703 aa22.47■■□□□ 1.19
CAPN12-203ENST00000594497 RAPGEF4Q8WZA2 1011 aa22.47■■□□□ 1.19
CAPN12-203ENST00000594497 ANKRD26Q9UPS8 1709 aa22.47■■□□□ 1.19
CAPN12-203ENST00000594497 NSD2O96028 1365 aa22.46■■□□□ 1.19
CAPN12-203ENST00000594497 MAP2P11137 1827 aaKnown RBP22.45■■□□□ 1.19
CAPN12-203ENST00000594497 TUBGCP6Q96RT7 1819 aa22.45■■□□□ 1.19
CAPN12-203ENST00000594497 TATP17735 454 aaPredicted RBP22.43■■□□□ 1.18
CAPN12-203ENST00000594497 SGIP1Q9BQI5 828 aa22.43■■□□□ 1.18
CAPN12-203ENST00000594497 YY1P25490 414 aa22.42■■□□□ 1.18
CAPN12-203ENST00000594497 AKT1S1Q96B36 256 aa22.42■■□□□ 1.18
CAPN12-203ENST00000594497 EMILIN1Q9Y6C2 1016 aa22.42■■□□□ 1.18
CAPN12-203ENST00000594497 PCDH11XQ9BZA7 1347 aa22.41■■□□□ 1.18
CAPN12-203ENST00000594497 PCDH11YQ9BZA8 1340 aa22.41■■□□□ 1.18
CAPN12-203ENST00000594497 PKD1L3Q7Z443 1732 aa22.41■■□□□ 1.18
CAPN12-203ENST00000594497 FHDC1Q9C0D6 1143 aaPredicted RBP22.4■■□□□ 1.18
CAPN12-203ENST00000594497 COL24A1Q17RW2 1714 aa22.39■■□□□ 1.17
CAPN12-203ENST00000594497 PPM1GO15355 546 aaPredicted RBP22.38■■□□□ 1.17
CAPN12-203ENST00000594497 KCNQ4P56696 695 aa22.38■■□□□ 1.17
CAPN12-203ENST00000594497 ARXQ96QS3 562 aa22.38■■□□□ 1.17
CAPN12-203ENST00000594497 SYT17Q9BSW7 474 aa22.38■■□□□ 1.17
CAPN12-203ENST00000594497 POLR3GLQ9BT43 218 aa22.38■■□□□ 1.17
CAPN12-203ENST00000594497 ITGB4P16144 1822 aa22.38■■□□□ 1.17
CAPN12-203ENST00000594497 SLC16A10Q8TF71 515 aa22.37■■□□□ 1.17
CAPN12-203ENST00000594497 TFCP2L1Q9NZI6 479 aa22.37■■□□□ 1.17
CAPN12-203ENST00000594497 CCNL1Q9UK58 526 aaPredicted RBP22.37■■□□□ 1.17
CAPN12-203ENST00000594497 NCAPD2Q15021 1401 aa22.37■■□□□ 1.17
CAPN12-203ENST00000594497 TOGARAM1Q9Y4F4 1720 aa22.37■■□□□ 1.17
CAPN12-203ENST00000594497 UTRNP46939 3433 aa22.37■■□□□ 1.17
CAPN12-203ENST00000594497 PNPLA7Q6ZV29 1317 aa22.36■■□□□ 1.17
CAPN12-203ENST00000594497 C5P01031 1676 aa22.36■■□□□ 1.17
CAPN12-203ENST00000594497 EIF4G2P78344 907 aaKnown RBP eCLIP22.35■■□□□ 1.17
CAPN12-203ENST00000594497 WASHC2AQ641Q2 1341 aa22.34■■□□□ 1.17
CAPN12-203ENST00000594497 MAP3K5Q99683 1374 aa22.34■■□□□ 1.17
CAPN12-203ENST00000594497 TAF1LQ8IZX4 1826 aa22.34■■□□□ 1.17
CAPN12-203ENST00000594497 CYP27B1O15528 508 aa22.33■■□□□ 1.17
CAPN12-203ENST00000594497 HSPA5P11021 654 aaKnown RBP22.31■■□□□ 1.16
CAPN12-203ENST00000594497 POLD1P28340 1107 aa22.31■■□□□ 1.16
CAPN12-203ENST00000594497 CCER1Q8TC90 406 aaPredicted RBP22.31■■□□□ 1.16
CAPN12-203ENST00000594497 POLKQ9UBT6 870 aa22.31■■□□□ 1.16
CAPN12-203ENST00000594497 CHD4Q14839 1912 aa22.31■■□□□ 1.16
CAPN12-203ENST00000594497 MPRIPQ6WCQ1 1025 aa22.3■■□□□ 1.16
CAPN12-203ENST00000594497 PALLDQ8WX93 1383 aa22.29■■□□□ 1.16
CAPN12-203ENST00000594497 HMGB2P26583 209 aaKnown RBP22.29■■□□□ 1.16
CAPN12-203ENST00000594497 EYA1Q99502 592 aa22.29■■□□□ 1.16
CAPN12-203ENST00000594497 SPG7Q9UQ90 795 aa22.29■■□□□ 1.16
CAPN12-203ENST00000594497 TNNT2P45379 298 aaPredicted RBP22.27■■□□□ 1.16
CAPN12-203ENST00000594497 GOLGB1Q14789 3259 aaKnown RBP22.26■■□□□ 1.15
CAPN12-203ENST00000594497 NKX1-1Q15270 411 aaPredicted RBP22.26■■□□□ 1.15
CAPN12-203ENST00000594497 PANK3Q9H999 370 aa22.26■■□□□ 1.15
CAPN12-203ENST00000594497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.26■■□□□ 1.15
CAPN12-203ENST00000594497 MSH5O43196 834 aa22.25■■□□□ 1.15
CAPN12-203ENST00000594497 COL23A1Q86Y22 540 aaPredicted RBP22.25■■□□□ 1.15
CAPN12-203ENST00000594497 KLHL34Q8N239 644 aa22.25■■□□□ 1.15
CAPN12-203ENST00000594497 SMARCC1Q92922 1105 aaPredicted RBP22.25■■□□□ 1.15
CAPN12-203ENST00000594497 C4BP0C0L5 1744 aa22.25■■□□□ 1.15
CAPN12-203ENST00000594497 EIF4A2Q14240 407 aaKnown RBP22.24■■□□□ 1.15
CAPN12-203ENST00000594497 PIGBQ92521 554 aa22.22■■□□□ 1.15
CAPN12-203ENST00000594497 PLEKHG2Q9H7P9 1386 aa22.22■■□□□ 1.15
CAPN12-203ENST00000594497 UBR3Q6ZT12 1888 aa22.22■■□□□ 1.15
CAPN12-203ENST00000594497 IFNL2Q8IZJ0 200 aa22.21■■□□□ 1.15
CAPN12-203ENST00000594497 FLAD1Q8NFF5 587 aa22.2■■□□□ 1.14
CAPN12-203ENST00000594497 PHKG2P15735 406 aa22.19■■□□□ 1.14
CAPN12-203ENST00000594497 GPR162Q16538 588 aa22.19■■□□□ 1.14
CAPN12-203ENST00000594497 TMOD3Q9NYL9 352 aa22.19■■□□□ 1.14
CAPN12-203ENST00000594497 IGSF1Q8N6C5 1336 aa22.19■■□□□ 1.14
CAPN12-203ENST00000594497 AK7Q96M32 723 aa22.18■■□□□ 1.14
CAPN12-203ENST00000594497 MSL1Q68DK7 614 aa22.17■■□□□ 1.14
CAPN12-203ENST00000594497 NLGN2Q8NFZ4 835 aa22.16■■□□□ 1.14
CAPN12-203ENST00000594497 LOC102724428A0A0B4J2F2 783 aa22.15■■□□□ 1.14
CAPN12-203ENST00000594497 SIK1P57059 783 aa22.15■■□□□ 1.14
CAPN12-203ENST00000594497 MORC1Q86VD1 984 aa22.15■■□□□ 1.14
CAPN12-203ENST00000594497 PELP1Q8IZL8 1130 aaKnown RBP22.14■■□□□ 1.13
CAPN12-203ENST00000594497 ZNF784Q8NCA9 323 aaPredicted RBP22.14■■□□□ 1.13
CAPN12-203ENST00000594497 ASAP1Q9ULH1 1129 aa22.14■■□□□ 1.13
CAPN12-203ENST00000594497 KNSTRNQ9Y448 316 aa22.14■■□□□ 1.13
CAPN12-203ENST00000594497 ZNF831Q5JPB2 1677 aa22.11■■□□□ 1.13
CAPN12-203ENST00000594497 PHF14O94880 888 aa22.11■■□□□ 1.13
CAPN12-203ENST00000594497 HSP90AB1P08238 724 aaKnown RBP22.11■■□□□ 1.13
CAPN12-203ENST00000594497 PLEKHO1Q53GL0 409 aaPredicted RBP22.11■■□□□ 1.13
CAPN12-203ENST00000594497 AMIGO3Q86WK7 504 aa22.11■■□□□ 1.13
CAPN12-203ENST00000594497 LINC00116Q8NCU8 138 aa22.11■■□□□ 1.13
CAPN12-203ENST00000594497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.1■■□□□ 1.13
CAPN12-203ENST00000594497 SSFA2P28290 1259 aa22.1■■□□□ 1.13
CAPN12-203ENST00000594497 ATG3Q9NT62 314 aa22.1■■□□□ 1.13
CAPN12-203ENST00000594497 ERVV-2B6SEH9 535 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms