RNA–Protein interactions for RNA: ENST00000594417.1

ARHGEF1-208, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-208ENST00000594417 NUP188Q5SRE5 1749 aa19.13■□□□□ 0.65
ARHGEF1-208ENST00000594417 WNK3Q9BYP7 1800 aa19.13■□□□□ 0.65
ARHGEF1-208ENST00000594417 DCAF8L1A6NGE4 600 aa19.12■□□□□ 0.65
ARHGEF1-208ENST00000594417 PANK3Q9H999 370 aa19.12■□□□□ 0.65
ARHGEF1-208ENST00000594417 SLC27A3Q5K4L6 730 aa19.11■□□□□ 0.65
ARHGEF1-208ENST00000594417 WASHC2AQ641Q2 1341 aa19.09■□□□□ 0.65
ARHGEF1-208ENST00000594417 LRRC4BQ9NT99 713 aa19.09■□□□□ 0.65
ARHGEF1-208ENST00000594417 MEGF6O75095 1541 aa19.09■□□□□ 0.65
ARHGEF1-208ENST00000594417 SBF2Q86WG5 1849 aa19.09■□□□□ 0.65
ARHGEF1-208ENST00000594417 POLKQ9UBT6 870 aa19.08■□□□□ 0.64
ARHGEF1-208ENST00000594417 PCDH11XQ9BZA7 1347 aa19.07■□□□□ 0.64
ARHGEF1-208ENST00000594417 PCDH11YQ9BZA8 1340 aa19.07■□□□□ 0.64
ARHGEF1-208ENST00000594417 MTFR1LQ9H019 292 aa19.07■□□□□ 0.64
ARHGEF1-208ENST00000594417 RGPD3A6NKT7 1758 aaPredicted RBP19.06■□□□□ 0.64
ARHGEF1-208ENST00000594417 RGPD4Q7Z3J3 1758 aa19.06■□□□□ 0.64
ARHGEF1-208ENST00000594417 KCNQ4P56696 695 aa19.06■□□□□ 0.64
ARHGEF1-208ENST00000594417 SPG7Q9UQ90 795 aa19.06■□□□□ 0.64
ARHGEF1-208ENST00000594417 NHSQ6T4R5 1651 aa19.05■□□□□ 0.64
ARHGEF1-208ENST00000594417 FAM208AQ9UK61 1670 aaKnown RBP19.05■□□□□ 0.64
ARHGEF1-208ENST00000594417 ZNF827Q17R98 1081 aa19.05■□□□□ 0.64
ARHGEF1-208ENST00000594417 EYA1Q99502 592 aa19.05■□□□□ 0.64
ARHGEF1-208ENST00000594417 TFCP2L1Q9NZI6 479 aa19.05■□□□□ 0.64
ARHGEF1-208ENST00000594417 CCNL1Q9UK58 526 aaPredicted RBP19.05■□□□□ 0.64
ARHGEF1-208ENST00000594417 PTGER2P43116 358 aa19.04■□□□□ 0.64
ARHGEF1-208ENST00000594417 MORC1Q86VD1 984 aa19.04■□□□□ 0.64
ARHGEF1-208ENST00000594417 KNSTRNQ9Y448 316 aa19.04■□□□□ 0.64
ARHGEF1-208ENST00000594417 CYP27B1O15528 508 aa19.03■□□□□ 0.64
ARHGEF1-208ENST00000594417 MPRIPQ6WCQ1 1025 aa19.03■□□□□ 0.64
ARHGEF1-208ENST00000594417 AKT1S1Q96B36 256 aa19.03■□□□□ 0.64
ARHGEF1-208ENST00000594417 HMGB2P26583 209 aaKnown RBP19.02■□□□□ 0.64
ARHGEF1-208ENST00000594417 EIF4A2Q14240 407 aaKnown RBP19.01■□□□□ 0.63
ARHGEF1-208ENST00000594417 MSH5O43196 834 aa19■□□□□ 0.63
ARHGEF1-208ENST00000594417 NSD2O96028 1365 aa19■□□□□ 0.63
ARHGEF1-208ENST00000594417 MYOM1P52179 1685 aa18.99■□□□□ 0.63
ARHGEF1-208ENST00000594417 SLC16A10Q8TF71 515 aa18.99■□□□□ 0.63
ARHGEF1-208ENST00000594417 ARXQ96QS3 562 aa18.99■□□□□ 0.63
ARHGEF1-208ENST00000594417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.99■□□□□ 0.63
ARHGEF1-208ENST00000594417 KIF20BQ96Q89 1820 aa18.99■□□□□ 0.63
ARHGEF1-208ENST00000594417 POLD1P28340 1107 aa18.98■□□□□ 0.63
ARHGEF1-208ENST00000594417 SMARCC1Q92922 1105 aaPredicted RBP18.98■□□□□ 0.63
ARHGEF1-208ENST00000594417 FHDC1Q9C0D6 1143 aaPredicted RBP18.98■□□□□ 0.63
ARHGEF1-208ENST00000594417 NKX1-1Q15270 411 aaPredicted RBP18.97■□□□□ 0.63
ARHGEF1-208ENST00000594417 IFNL2Q8IZJ0 200 aa18.97■□□□□ 0.63
ARHGEF1-208ENST00000594417 BTAF1O14981 1849 aa18.96■□□□□ 0.63
ARHGEF1-208ENST00000594417 SYT17Q9BSW7 474 aa18.96■□□□□ 0.63
ARHGEF1-208ENST00000594417 PNPLA7Q6ZV29 1317 aa18.96■□□□□ 0.63
ARHGEF1-208ENST00000594417 PIGBQ92521 554 aa18.95■□□□□ 0.62
ARHGEF1-208ENST00000594417 SGIP1Q9BQI5 828 aa18.95■□□□□ 0.62
ARHGEF1-208ENST00000594417 TMOD3Q9NYL9 352 aa18.95■□□□□ 0.62
ARHGEF1-208ENST00000594417 PALLDQ8WX93 1383 aa18.94■□□□□ 0.62
ARHGEF1-208ENST00000594417 YY1P25490 414 aa18.94■□□□□ 0.62
ARHGEF1-208ENST00000594417 KIF7Q2M1P5 1343 aa18.94■□□□□ 0.62
ARHGEF1-208ENST00000594417 RGPD2P0DJD1 1756 aa18.93■□□□□ 0.62
ARHGEF1-208ENST00000594417 KAT6BQ8WYB5 2073 aa18.93■□□□□ 0.62
ARHGEF1-208ENST00000594417 PHKG2P15735 406 aa18.93■□□□□ 0.62
ARHGEF1-208ENST00000594417 PLEKHO1Q53GL0 409 aaPredicted RBP18.93■□□□□ 0.62
ARHGEF1-208ENST00000594417 KLHL34Q8N239 644 aa18.93■□□□□ 0.62
ARHGEF1-208ENST00000594417 CASZ1Q86V15 1759 aa18.93■□□□□ 0.62
ARHGEF1-208ENST00000594417 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
ARHGEF1-208ENST00000594417 FLAD1Q8NFF5 587 aa18.91■□□□□ 0.62
ARHGEF1-208ENST00000594417 IGSF1Q8N6C5 1336 aa18.91■□□□□ 0.62
ARHGEF1-208ENST00000594417 HSP90AB1P08238 724 aaKnown RBP18.9■□□□□ 0.62
ARHGEF1-208ENST00000594417 AMOTQ4VCS5 1084 aa18.9■□□□□ 0.62
ARHGEF1-208ENST00000594417 COL23A1Q86Y22 540 aaPredicted RBP18.9■□□□□ 0.62
ARHGEF1-208ENST00000594417 AK7Q96M32 723 aa18.9■□□□□ 0.62
ARHGEF1-208ENST00000594417 PAPPAQ13219 1627 aa18.89■□□□□ 0.62
ARHGEF1-208ENST00000594417 AMER1Q5JTC6 1135 aaPredicted RBP18.89■□□□□ 0.61
ARHGEF1-208ENST00000594417 DOT1LQ8TEK3 1739 aa18.88■□□□□ 0.61
ARHGEF1-208ENST00000594417 ZNF530Q6P9A1 599 aaPredicted RBP18.88■□□□□ 0.61
ARHGEF1-208ENST00000594417 ASAP1Q9ULH1 1129 aa18.88■□□□□ 0.61
ARHGEF1-208ENST00000594417 LOC102724428A0A0B4J2F2 783 aa18.87■□□□□ 0.61
ARHGEF1-208ENST00000594417 SIK1P57059 783 aa18.87■□□□□ 0.61
ARHGEF1-208ENST00000594417 C1orf141Q5JVX7 400 aa18.87■□□□□ 0.61
ARHGEF1-208ENST00000594417 CC2D1BQ5T0F9 858 aaKnown RBP18.87■□□□□ 0.61
ARHGEF1-208ENST00000594417 SULT6B1Q6IMI4 303 aa18.87■□□□□ 0.61
ARHGEF1-208ENST00000594417 DCAF5Q96JK2 942 aa18.87■□□□□ 0.61
ARHGEF1-208ENST00000594417 ERVV-2B6SEH9 535 aa18.86■□□□□ 0.61
ARHGEF1-208ENST00000594417 CNGB1Q14028 1251 aaPredicted RBP18.86■□□□□ 0.61
ARHGEF1-208ENST00000594417 AEBP1Q8IUX7 1158 aa18.86■□□□□ 0.61
ARHGEF1-208ENST00000594417 SHANK3Q9BYB0 1731 aa18.86■□□□□ 0.61
ARHGEF1-208ENST00000594417 IL13P35225 146 aa18.85■□□□□ 0.61
ARHGEF1-208ENST00000594417 ATP6V1AP38606 617 aa18.85■□□□□ 0.61
ARHGEF1-208ENST00000594417 MTHFSP49914 203 aa18.85■□□□□ 0.61
ARHGEF1-208ENST00000594417 CABP4P57796 275 aa18.85■□□□□ 0.61
ARHGEF1-208ENST00000594417 GPR162Q16538 588 aa18.85■□□□□ 0.61
ARHGEF1-208ENST00000594417 MSL1Q68DK7 614 aa18.85■□□□□ 0.61
ARHGEF1-208ENST00000594417 PLEKHG2Q9H7P9 1386 aa18.84■□□□□ 0.61
ARHGEF1-208ENST00000594417 PHF14O94880 888 aa18.84■□□□□ 0.61
ARHGEF1-208ENST00000594417 ATG3Q9NT62 314 aa18.84■□□□□ 0.61
ARHGEF1-208ENST00000594417 PER1O15534 1290 aaPredicted RBP18.83■□□□□ 0.6
ARHGEF1-208ENST00000594417 PELP1Q8IZL8 1130 aaKnown RBP18.83■□□□□ 0.6
ARHGEF1-208ENST00000594417 RBM42Q9BTD8 480 aaKnown RBP18.83■□□□□ 0.6
ARHGEF1-208ENST00000594417 MAP3K5Q99683 1374 aa18.82■□□□□ 0.6
ARHGEF1-208ENST00000594417 MAP2P11137 1827 aaKnown RBP18.82■□□□□ 0.6
ARHGEF1-208ENST00000594417 LINC00116Q8NCU8 138 aa18.82■□□□□ 0.6
ARHGEF1-208ENST00000594417 ANKRD26Q9UPS8 1709 aa18.81■□□□□ 0.6
ARHGEF1-208ENST00000594417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.81■□□□□ 0.6
ARHGEF1-208ENST00000594417 GNPATO15228 680 aa18.8■□□□□ 0.6
ARHGEF1-208ENST00000594417 ITPK1Q13572 414 aa18.8■□□□□ 0.6
ARHGEF1-208ENST00000594417 SMIM5Q71RC9 77 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms