RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 FKBP8Q14318 412 aa27.03■■□□□ 1.92
PNKP-203ENST00000593946 GNAT3A8MTJ3 354 aa27.02■■□□□ 1.92
PNKP-203ENST00000593946 GNAI1P63096 354 aa27.02■■□□□ 1.92
PNKP-203ENST00000593946 MCM10Q7L590 875 aa27.02■■□□□ 1.92
PNKP-203ENST00000593946 AMOTQ4VCS5 1084 aa27.01■■□□□ 1.91
PNKP-203ENST00000593946 CFAP44Q96MT7 982 aa27.01■■□□□ 1.91
PNKP-203ENST00000593946 PKD1L3Q7Z443 1732 aa27■■□□□ 1.91
PNKP-203ENST00000593946 CRB1P82279 1406 aa27■■□□□ 1.91
PNKP-203ENST00000593946 RRP1P56182 461 aaKnown RBP27■■□□□ 1.91
PNKP-203ENST00000593946 PLEKHO1Q53GL0 409 aaPredicted RBP27■■□□□ 1.91
PNKP-203ENST00000593946 RTF1Q92541 710 aaKnown RBP27■■□□□ 1.91
PNKP-203ENST00000593946 PLCH1Q4KWH8 1693 aa27■■□□□ 1.91
PNKP-203ENST00000593946 MEGF6O75095 1541 aa27■■□□□ 1.91
PNKP-203ENST00000593946 PARP4Q9UKK3 1724 aaKnown RBP26.99■■□□□ 1.91
PNKP-203ENST00000593946 RAPGEF4Q8WZA2 1011 aa26.98■■□□□ 1.91
PNKP-203ENST00000593946 CT47B1P0C2W7 299 aaPredicted RBP26.97■■□□□ 1.91
PNKP-203ENST00000593946 LAS1LQ9Y4W2 734 aaKnown RBP26.97■■□□□ 1.91
PNKP-203ENST00000593946 IRX6P78412 446 aaPredicted RBP26.96■■□□□ 1.91
PNKP-203ENST00000593946 EXOSC9Q06265 439 aaKnown RBP26.96■■□□□ 1.91
PNKP-203ENST00000593946 ZNF530Q6P9A1 599 aaPredicted RBP26.96■■□□□ 1.91
PNKP-203ENST00000593946 TOM1L2Q6ZVM7 507 aa26.96■■□□□ 1.91
PNKP-203ENST00000593946 MBIPQ9NS73 344 aa26.96■■□□□ 1.91
PNKP-203ENST00000593946 BTG4Q9NY30 223 aa26.95■■□□□ 1.9
PNKP-203ENST00000593946 ADAMTS7Q9UKP4 1686 aa26.94■■□□□ 1.9
PNKP-203ENST00000593946 TATP17735 454 aaPredicted RBP26.94■■□□□ 1.9
PNKP-203ENST00000593946 AKAP4Q5JQC9 854 aa26.94■■□□□ 1.9
PNKP-203ENST00000593946 CARD10Q9BWT7 1032 aa26.94■■□□□ 1.9
PNKP-203ENST00000593946 NRAPQ86VF7 1730 aa26.94■■□□□ 1.9
PNKP-203ENST00000593946 JCADQ9P266 1359 aa26.94■■□□□ 1.9
PNKP-203ENST00000593946 LARP1Q6PKG0 1096 aaKnown RBP26.93■■□□□ 1.9
PNKP-203ENST00000593946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.93■■□□□ 1.9
PNKP-203ENST00000593946 CEMIPQ8WUJ3 1361 aa26.93■■□□□ 1.9
PNKP-203ENST00000593946 CHL1O00533 1208 aa26.93■■□□□ 1.9
PNKP-203ENST00000593946 EVA1CP58658 441 aa26.93■■□□□ 1.9
PNKP-203ENST00000593946 IL17REQ8NFR9 667 aa26.93■■□□□ 1.9
PNKP-203ENST00000593946 STRN4Q9NRL3 753 aa26.93■■□□□ 1.9
PNKP-203ENST00000593946 NWD2Q9ULI1 1742 aa26.92■■□□□ 1.9
PNKP-203ENST00000593946 OVOS2A0A0G2JMS6 1433 aa26.92■■□□□ 1.9
PNKP-203ENST00000593946 RARSP54136 660 aaKnown RBP26.9■■□□□ 1.9
PNKP-203ENST00000593946 SCN11AQ9UI33 1791 aa26.9■■□□□ 1.9
PNKP-203ENST00000593946 C1orf141Q5JVX7 400 aa26.9■■□□□ 1.9
PNKP-203ENST00000593946 ERICH6BQ5W0A0 696 aa26.89■■□□□ 1.9
PNKP-203ENST00000593946 BCAR3O75815 825 aa26.88■■□□□ 1.89
PNKP-203ENST00000593946 ADAMTS2O95450 1211 aa26.88■■□□□ 1.89
PNKP-203ENST00000593946 SPG7Q9UQ90 795 aa26.88■■□□□ 1.89
PNKP-203ENST00000593946 SIPA1L3O60292 1781 aaPredicted RBP26.88■■□□□ 1.89
PNKP-203ENST00000593946 SHANK3Q9BYB0 1731 aa26.87■■□□□ 1.89
PNKP-203ENST00000593946 NUTM2BA6NNL0 878 aaPredicted RBP26.87■■□□□ 1.89
PNKP-203ENST00000593946 NUTM2EB1AL46 878 aaPredicted RBP26.87■■□□□ 1.89
PNKP-203ENST00000593946 NUTM2AQ8IVF1 878 aaPredicted RBP26.87■■□□□ 1.89
PNKP-203ENST00000593946 WNK3Q9BYP7 1800 aa26.86■■□□□ 1.89
PNKP-203ENST00000593946 PLIN1O60240 522 aa26.86■■□□□ 1.89
PNKP-203ENST00000593946 LGR6Q9HBX8 967 aa26.85■■□□□ 1.89
PNKP-203ENST00000593946 KDM3BQ7LBC6 1761 aa26.85■■□□□ 1.89
PNKP-203ENST00000593946 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.85■■□□□ 1.89
PNKP-203ENST00000593946 ZNF428Q96B54 188 aa26.84■■□□□ 1.89
PNKP-203ENST00000593946 BABAM1Q9NWV8 329 aa26.84■■□□□ 1.89
PNKP-203ENST00000593946 SLIT2O94813 1529 aa26.83■■□□□ 1.89
PNKP-203ENST00000593946 RNMTO43148 476 aaKnown RBP26.83■■□□□ 1.89
PNKP-203ENST00000593946 IL2RBP14784 551 aa26.83■■□□□ 1.89
PNKP-203ENST00000593946 MPRIPQ6WCQ1 1025 aa26.83■■□□□ 1.89
PNKP-203ENST00000593946 PHKG2P15735 406 aa26.82■■□□□ 1.88
PNKP-203ENST00000593946 TAF7Q15545 349 aaPredicted RBP26.82■■□□□ 1.88
PNKP-203ENST00000593946 TSPYL6Q8N831 410 aa26.82■■□□□ 1.88
PNKP-203ENST00000593946 TSPYL4Q9UJ04 414 aa26.82■■□□□ 1.88
PNKP-203ENST00000593946 C8orf58Q8NAV2 365 aa26.82■■□□□ 1.88
PNKP-203ENST00000593946 SPATA31A6Q5VVP1 1343 aa26.81■■□□□ 1.88
PNKP-203ENST00000593946 VAMP4O75379 141 aa26.81■■□□□ 1.88
PNKP-203ENST00000593946 IFNL2Q8IZJ0 200 aa26.81■■□□□ 1.88
PNKP-203ENST00000593946 MIS18AQ9NYP9 233 aa26.81■■□□□ 1.88
PNKP-203ENST00000593946 KDM6AO15550 1401 aaPredicted RBP26.8■■□□□ 1.88
PNKP-203ENST00000593946 CYP27B1O15528 508 aa26.8■■□□□ 1.88
PNKP-203ENST00000593946 HSPA1LP34931 641 aa26.79■■□□□ 1.88
PNKP-203ENST00000593946 TWISTNBQ3B726 338 aaPredicted RBP26.79■■□□□ 1.88
PNKP-203ENST00000593946 DISP2A7MBM2 1401 aa26.79■■□□□ 1.88
PNKP-203ENST00000593946 ALDH1L2Q3SY69 923 aa26.79■■□□□ 1.88
PNKP-203ENST00000593946 SSH1Q8WYL5 1049 aa26.79■■□□□ 1.88
PNKP-203ENST00000593946 BCL2L13Q9BXK5 485 aa26.79■■□□□ 1.88
PNKP-203ENST00000593946 ZCRB1Q8TBF4 217 aaKnown RBP26.78■■□□□ 1.88
PNKP-203ENST00000593946 LRP6O75581 1613 aa26.78■■□□□ 1.88
PNKP-203ENST00000593946 TEFQ10587 303 aa26.77■■□□□ 1.88
PNKP-203ENST00000593946 USP35Q9P2H5 1018 aa26.77■■□□□ 1.88
PNKP-203ENST00000593946 PCDH11XQ9BZA7 1347 aa26.77■■□□□ 1.88
PNKP-203ENST00000593946 PCDH11YQ9BZA8 1340 aa26.77■■□□□ 1.88
PNKP-203ENST00000593946 MRC1P22897 1456 aa26.76■■□□□ 1.88
PNKP-203ENST00000593946 SMC4Q9NTJ3 1288 aa26.76■■□□□ 1.88
PNKP-203ENST00000593946 C20orf194Q5TEA3 1177 aa26.76■■□□□ 1.87
PNKP-203ENST00000593946 ELL2O00472 640 aaPredicted RBP26.75■■□□□ 1.87
PNKP-203ENST00000593946 KRT24Q2M2I5 525 aa26.75■■□□□ 1.87
PNKP-203ENST00000593946 HSP90AB1P08238 724 aaKnown RBP26.74■■□□□ 1.87
PNKP-203ENST00000593946 DCAF5Q96JK2 942 aa26.74■■□□□ 1.87
PNKP-203ENST00000593946 BRPF1P55201 1214 aaPredicted RBP26.73■■□□□ 1.87
PNKP-203ENST00000593946 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.73■■□□□ 1.87
PNKP-203ENST00000593946 SPATA31A1Q5TZJ5 1347 aa26.72■■□□□ 1.87
PNKP-203ENST00000593946 FRAT1Q92837 279 aaPredicted RBP26.72■■□□□ 1.87
PNKP-203ENST00000593946 CANXP27824 592 aaKnown RBP26.71■■□□□ 1.87
PNKP-203ENST00000593946 PDE3AQ14432 1141 aa26.71■■□□□ 1.87
PNKP-203ENST00000593946 CACNA1FO60840 1977 aa26.71■■□□□ 1.87
PNKP-203ENST00000593946 EXOC6Q8TAG9 804 aa26.7■■□□□ 1.87
PNKP-203ENST00000593946 PPP4R2Q9NY27 417 aa26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms