RNA–Protein interactions for RNA: ENST00000593687.5

ZNF546-202, Transcript of zinc finger protein 546, humanhuman

TSL 4

Gene ZNF546, Length 490 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-202ENST00000593687 MSH5O43196 834 aa11.2□□□□□ -0.62
ZNF546-202ENST00000593687 PCNTO95613 3336 aa11.19□□□□□ -0.62
ZNF546-202ENST00000593687 NSD2O96028 1365 aa11.19□□□□□ -0.62
ZNF546-202ENST00000593687 PRIM1P49642 420 aaKnown RBP11.19□□□□□ -0.62
ZNF546-202ENST00000593687 DDX54Q8TDD1 881 aaKnown RBP11.19□□□□□ -0.62
ZNF546-202ENST00000593687 ZNF526Q8TF50 670 aaPredicted RBP11.19□□□□□ -0.62
ZNF546-202ENST00000593687 CICQ96RK0 1608 aaPredicted RBP11.19□□□□□ -0.62
ZNF546-202ENST00000593687 NSD3Q9BZ95 1437 aa11.18□□□□□ -0.62
ZNF546-202ENST00000593687 COL23A1Q86Y22 540 aaPredicted RBP11.18□□□□□ -0.62
ZNF546-202ENST00000593687 POTEDQ86YR6 584 aa11.18□□□□□ -0.62
ZNF546-202ENST00000593687 TAF1LQ8IZX4 1826 aa11.18□□□□□ -0.62
ZNF546-202ENST00000593687 EDC4Q6P2E9 1401 aaKnown RBP11.18□□□□□ -0.62
ZNF546-202ENST00000593687 SBNO2Q9Y2G9 1366 aa11.17□□□□□ -0.62
ZNF546-202ENST00000593687 KCNQ4P56696 695 aa11.17□□□□□ -0.62
ZNF546-202ENST00000593687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.17□□□□□ -0.62
ZNF546-202ENST00000593687 WDR90Q96KV7 1748 aa11.16□□□□□ -0.62
ZNF546-202ENST00000593687 KIF3CO14782 793 aa11.16□□□□□ -0.62
ZNF546-202ENST00000593687 MSL1Q68DK7 614 aa11.16□□□□□ -0.62
ZNF546-202ENST00000593687 CGNL1Q0VF96 1302 aa11.15□□□□□ -0.62
ZNF546-202ENST00000593687 IGSF1Q8N6C5 1336 aa11.15□□□□□ -0.62
ZNF546-202ENST00000593687 TOMM70O94826 608 aa11.15□□□□□ -0.62
ZNF546-202ENST00000593687 HDGFL2Q7Z4V5 671 aaPredicted RBP11.15□□□□□ -0.62
ZNF546-202ENST00000593687 NME9Q86XW9 330 aa11.15□□□□□ -0.62
ZNF546-202ENST00000593687 ZCRB1Q8TBF4 217 aaKnown RBP11.15□□□□□ -0.62
ZNF546-202ENST00000593687 IP6K1Q92551 441 aa11.15□□□□□ -0.62
ZNF546-202ENST00000593687 C4BP0C0L5 1744 aa11.15□□□□□ -0.63
ZNF546-202ENST00000593687 ROCK2O75116 1388 aaKnown RBP11.15□□□□□ -0.63
ZNF546-202ENST00000593687 CD163L1Q9NR16 1453 aa11.14□□□□□ -0.63
ZNF546-202ENST00000593687 UBR3Q6ZT12 1888 aa11.13□□□□□ -0.63
ZNF546-202ENST00000593687 MEGF6O75095 1541 aa11.13□□□□□ -0.63
ZNF546-202ENST00000593687 TOGARAM1Q9Y4F4 1720 aa11.12□□□□□ -0.63
ZNF546-202ENST00000593687 DNAJC5GQ8N7S2 189 aa11.12□□□□□ -0.63
ZNF546-202ENST00000593687 TERF2IPQ9NYB0 399 aa11.12□□□□□ -0.63
ZNF546-202ENST00000593687 RGPD2P0DJD1 1756 aa11.12□□□□□ -0.63
ZNF546-202ENST00000593687 RTL1A6NKG5 1358 aa11.12□□□□□ -0.63
ZNF546-202ENST00000593687 PALLDQ8WX93 1383 aa11.12□□□□□ -0.63
ZNF546-202ENST00000593687 SMG6Q86US8 1419 aaKnown RBP11.11□□□□□ -0.63
ZNF546-202ENST00000593687 AK7Q96M32 723 aa11.11□□□□□ -0.63
ZNF546-202ENST00000593687 KIF13BQ9NQT8 1826 aa11.11□□□□□ -0.63
ZNF546-202ENST00000593687 LTV1Q96GA3 475 aaPredicted RBP11.1□□□□□ -0.63
ZNF546-202ENST00000593687 A0A1W2PP64 1363 aa11.1□□□□□ -0.63
ZNF546-202ENST00000593687 PCDH11XQ9BZA7 1347 aa11.09□□□□□ -0.63
ZNF546-202ENST00000593687 PCDH11YQ9BZA8 1340 aa11.09□□□□□ -0.63
ZNF546-202ENST00000593687 PLEKHG2Q9H7P9 1386 aa11.09□□□□□ -0.63
ZNF546-202ENST00000593687 SSFA2P28290 1259 aa11.09□□□□□ -0.63
ZNF546-202ENST00000593687 HOXC9P31274 260 aa11.09□□□□□ -0.63
ZNF546-202ENST00000593687 JMYQ8N9B5 988 aa11.09□□□□□ -0.63
ZNF546-202ENST00000593687 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
ZNF546-202ENST00000593687 RAPGEF4Q8WZA2 1011 aa11.09□□□□□ -0.63
ZNF546-202ENST00000593687 SMARCC1Q92922 1105 aaPredicted RBP11.09□□□□□ -0.63
ZNF546-202ENST00000593687 KLRG1Q96E93 195 aa11.09□□□□□ -0.63
ZNF546-202ENST00000593687 ITGB4P16144 1822 aa11.08□□□□□ -0.64
ZNF546-202ENST00000593687 AMPHP49418 695 aa11.08□□□□□ -0.64
ZNF546-202ENST00000593687 TMC1Q8TDI8 760 aa11.08□□□□□ -0.64
ZNF546-202ENST00000593687 L3MBTL2Q969R5 705 aa11.08□□□□□ -0.64
ZNF546-202ENST00000593687 MAP3K19Q56UN5 1328 aa11.08□□□□□ -0.64
ZNF546-202ENST00000593687 PXDNLA1KZ92 1463 aa11.07□□□□□ -0.64
ZNF546-202ENST00000593687 KIAA1551Q9HCM1 1747 aa11.07□□□□□ -0.64
ZNF546-202ENST00000593687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.07□□□□□ -0.64
ZNF546-202ENST00000593687 PRELPP51888 382 aa11.07□□□□□ -0.64
ZNF546-202ENST00000593687 FSTL1Q12841 308 aa11.07□□□□□ -0.64
ZNF546-202ENST00000593687 C16orf71Q8IYS4 520 aaPredicted RBP11.07□□□□□ -0.64
ZNF546-202ENST00000593687 TNS4Q8IZW8 715 aa11.07□□□□□ -0.64
ZNF546-202ENST00000593687 COG3Q96JB2 828 aa11.07□□□□□ -0.64
ZNF546-202ENST00000593687 PUS7Q96PZ0 661 aaKnown RBP11.07□□□□□ -0.64
ZNF546-202ENST00000593687 TNRC6CQ9HCJ0 1690 aaKnown RBP11.06□□□□□ -0.64
ZNF546-202ENST00000593687 TGFB2P61812 414 aa11.06□□□□□ -0.64
ZNF546-202ENST00000593687 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
ZNF546-202ENST00000593687 C10orf71Q711Q0 1435 aa11.06□□□□□ -0.64
ZNF546-202ENST00000593687 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
ZNF546-202ENST00000593687 BRCA1P38398 1863 aaKnown RBP11.06□□□□□ -0.64
ZNF546-202ENST00000593687 N4BP2Q86UW6 1770 aaPredicted RBP11.05□□□□□ -0.64
ZNF546-202ENST00000593687 MAP2P11137 1827 aaKnown RBP11.05□□□□□ -0.64
ZNF546-202ENST00000593687 ARFGEF1Q9Y6D6 1849 aa11.05□□□□□ -0.64
ZNF546-202ENST00000593687 PHF14O94880 888 aa11.05□□□□□ -0.64
ZNF546-202ENST00000593687 TATP17735 454 aaPredicted RBP11.05□□□□□ -0.64
ZNF546-202ENST00000593687 MPRIPQ6WCQ1 1025 aa11.05□□□□□ -0.64
ZNF546-202ENST00000593687 WWC3Q9ULE0 1092 aa11.05□□□□□ -0.64
ZNF546-202ENST00000593687 CAPN15O75808 1086 aa11.04□□□□□ -0.64
ZNF546-202ENST00000593687 SLC12A5Q9H2X9 1139 aa11.04□□□□□ -0.64
ZNF546-202ENST00000593687 NMRK2Q9NPI5 230 aa11.04□□□□□ -0.64
ZNF546-202ENST00000593687 KDM2BQ8NHM5 1336 aa11.04□□□□□ -0.64
ZNF546-202ENST00000593687 KIF24Q5T7B8 1368 aa11.03□□□□□ -0.64
ZNF546-202ENST00000593687 NBPF6Q5VWK0 638 aa11.03□□□□□ -0.64
ZNF546-202ENST00000593687 NBPF4Q96M43 638 aa11.03□□□□□ -0.64
ZNF546-202ENST00000593687 BCS1LQ9Y276 419 aa11.03□□□□□ -0.64
ZNF546-202ENST00000593687 MMP10P09238 476 aa11.02□□□□□ -0.65
ZNF546-202ENST00000593687 AMIGO3Q86WK7 504 aa11.02□□□□□ -0.65
ZNF546-202ENST00000593687 C4AP0C0L4 1744 aa11.01□□□□□ -0.65
ZNF546-202ENST00000593687 LOC102724428A0A0B4J2F2 783 aa11.01□□□□□ -0.65
ZNF546-202ENST00000593687 GNPATO15228 680 aa11.01□□□□□ -0.65
ZNF546-202ENST00000593687 SIK1P57059 783 aa11.01□□□□□ -0.65
ZNF546-202ENST00000593687 ARHGAP27Q6ZUM4 889 aa11.01□□□□□ -0.65
ZNF546-202ENST00000593687 CCDC87Q9NVE4 849 aa11.01□□□□□ -0.65
ZNF546-202ENST00000593687 ZNF831Q5JPB2 1677 aa11.01□□□□□ -0.65
ZNF546-202ENST00000593687 INSRP06213 1382 aa11.01□□□□□ -0.65
ZNF546-202ENST00000593687 FLT4P35916 1363 aa11.01□□□□□ -0.65
ZNF546-202ENST00000593687 SLC24A1O60721 1099 aa11□□□□□ -0.65
ZNF546-202ENST00000593687 NLGN1Q8N2Q7 840 aa11□□□□□ -0.65
ZNF546-202ENST00000593687 USHBP1Q8N6Y0 703 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms