RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 PARP4Q9UKK3 1724 aaKnown RBP15.14■□□□□ 0.01
CACNA1A-213ENST00000593267 LRRC37A3O60309 1634 aa15.14■□□□□ 0.01
CACNA1A-213ENST00000593267 FAM83GA6ND36 823 aa15.14■□□□□ 0.01
CACNA1A-213ENST00000593267 RIPK4P57078 832 aa15.14■□□□□ 0.01
CACNA1A-213ENST00000593267 GOLGA2Q08379 1002 aa15.14■□□□□ 0.01
CACNA1A-213ENST00000593267 WDR17Q8IZU2 1322 aa15.14■□□□□ 0.01
CACNA1A-213ENST00000593267 WDR63Q8IWG1 891 aa15.13■□□□□ 0.01
CACNA1A-213ENST00000593267 CDCA7LQ96GN5 454 aa15.13■□□□□ 0.01
CACNA1A-213ENST00000593267 WNK3Q9BYP7 1800 aa15.13■□□□□ 0.01
CACNA1A-213ENST00000593267 TRMT2AQ8IZ69 625 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-213ENST00000593267 CSB-PGBD3P0DP91 1061 aa15.11■□□□□ 0.01
CACNA1A-213ENST00000593267 SLFN5Q08AF3 891 aa15.11■□□□□ 0.01
CACNA1A-213ENST00000593267 LMOD3Q0VAK6 560 aa15.11■□□□□ 0.01
CACNA1A-213ENST00000593267 GAS2L2Q8NHY3 880 aa15.11■□□□□ 0.01
CACNA1A-213ENST00000593267 MEGF6O75095 1541 aa15.11■□□□□ 0.01
CACNA1A-213ENST00000593267 VIRMAQ69YN4 1812 aaKnown RBP15.1■□□□□ 0.01
CACNA1A-213ENST00000593267 CRB1P82279 1406 aa15.1■□□□□ 0.01
CACNA1A-213ENST00000593267 BCL9LQ86UU0 1499 aa15.1■□□□□ 0.01
CACNA1A-213ENST00000593267 E9PSI1 815 aa15.1■□□□□ 0.01
CACNA1A-213ENST00000593267 MTHFSDQ2M296 383 aaKnown RBP15.1■□□□□ 0.01
CACNA1A-213ENST00000593267 NLRP2Q9NX02 1062 aa15.1■□□□□ 0.01
CACNA1A-213ENST00000593267 SLIT2O94813 1529 aa15.1■□□□□ 0.01
CACNA1A-213ENST00000593267 IL16Q14005 1332 aa15.1■□□□□ 0.01
CACNA1A-213ENST00000593267 ADAMTS7Q9UKP4 1686 aa15.09■□□□□ 0.01
CACNA1A-213ENST00000593267 DUSP27Q5VZP5 1158 aa15.09■□□□□ 0.01
CACNA1A-213ENST00000593267 CCDC125Q86Z20 511 aa15.09■□□□□ 0.01
CACNA1A-213ENST00000593267 GJD4Q96KN9 370 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-213ENST00000593267 SPINK5Q9NQ38 1064 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-213ENST00000593267 BTG4Q9NY30 223 aa15.08■□□□□ 0
CACNA1A-213ENST00000593267 SHANK3Q9BYB0 1731 aa15.08■□□□□ 0
CACNA1A-213ENST00000593267 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.08■□□□□ 0
CACNA1A-213ENST00000593267 MAP3K5Q99683 1374 aa15.08■□□□□ 0
CACNA1A-213ENST00000593267 OVOS2A0A0G2JMS6 1433 aa15.08■□□□□ 0
CACNA1A-213ENST00000593267 AMOTQ4VCS5 1084 aa15.07■□□□□ 0
CACNA1A-213ENST00000593267 CARD10Q9BWT7 1032 aa15.07■□□□□ 0
CACNA1A-213ENST00000593267 HTATSF1O43719 755 aaKnown RBP15.06■□□□□ 0
CACNA1A-213ENST00000593267 CALD1Q05682 793 aaKnown RBP15.06■□□□□ 0
CACNA1A-213ENST00000593267 PLEKHO1Q53GL0 409 aaPredicted RBP15.06■□□□□ 0
CACNA1A-213ENST00000593267 LARP1Q6PKG0 1096 aaKnown RBP15.06■□□□□ 0
CACNA1A-213ENST00000593267 TOM1L2Q6ZVM7 507 aa15.06■□□□□ 0
CACNA1A-213ENST00000593267 RAPGEF4Q8WZA2 1011 aa15.06■□□□□ 0
CACNA1A-213ENST00000593267 EVA1CP58658 441 aa15.05■□□□□ -0
CACNA1A-213ENST00000593267 UNC5CLQ8IV45 518 aa15.05■□□□□ -0
CACNA1A-213ENST00000593267 STRN4Q9NRL3 753 aa15.05■□□□□ -0
CACNA1A-213ENST00000593267 SCN11AQ9UI33 1791 aa15.04■□□□□ -0
CACNA1A-213ENST00000593267 DISP2A7MBM2 1401 aa15.04■□□□□ -0
CACNA1A-213ENST00000593267 GNAT3A8MTJ3 354 aa15.04■□□□□ -0
CACNA1A-213ENST00000593267 TATP17735 454 aaPredicted RBP15.04■□□□□ -0
CACNA1A-213ENST00000593267 MYH16Q9H6N6 1097 aa15.04■□□□□ -0
CACNA1A-213ENST00000593267 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.04■□□□□ -0
CACNA1A-213ENST00000593267 SIPA1L3O60292 1781 aaPredicted RBP15.03■□□□□ -0
CACNA1A-213ENST00000593267 THUMPD2Q9BTF0 503 aaKnown RBP15.03■□□□□ -0
CACNA1A-213ENST00000593267 CEMIPQ8WUJ3 1361 aa15.02■□□□□ -0
CACNA1A-213ENST00000593267 FANCIQ9NVI1 1328 aa15.02■□□□□ -0
CACNA1A-213ENST00000593267 ZNF853P0CG23 659 aa15.02■□□□□ -0
CACNA1A-213ENST00000593267 DCTN1Q14203 1278 aa15.02■□□□□ -0
CACNA1A-213ENST00000593267 AKAP4Q5JQC9 854 aa15.02■□□□□ -0
CACNA1A-213ENST00000593267 ZNF530Q6P9A1 599 aaPredicted RBP15.02■□□□□ -0
CACNA1A-213ENST00000593267 MCM10Q7L590 875 aa15.02■□□□□ -0
CACNA1A-213ENST00000593267 IFT57Q9NWB7 429 aa15.02■□□□□ -0
CACNA1A-213ENST00000593267 GLI3P10071 1580 aa15.02□□□□□ -0.01
CACNA1A-213ENST00000593267 BRWD3Q6RI45 1802 aa15.01□□□□□ -0.01
CACNA1A-213ENST00000593267 IL2RBP14784 551 aa15.01□□□□□ -0.01
CACNA1A-213ENST00000593267 GNAI1P63096 354 aa15.01□□□□□ -0.01
CACNA1A-213ENST00000593267 RTF1Q92541 710 aaKnown RBP15.01□□□□□ -0.01
CACNA1A-213ENST00000593267 SPG7Q9UQ90 795 aa15.01□□□□□ -0.01
CACNA1A-213ENST00000593267 KDM3BQ7LBC6 1761 aa15.01□□□□□ -0.01
CACNA1A-213ENST00000593267 SF3B2Q13435 895 aaKnown RBP15□□□□□ -0.01
CACNA1A-213ENST00000593267 CFAP44Q96MT7 982 aa15□□□□□ -0.01
CACNA1A-213ENST00000593267 CCDC9Q9Y3X0 531 aaKnown RBP15□□□□□ -0.01
CACNA1A-213ENST00000593267 C1orf141Q5JVX7 400 aa14.99□□□□□ -0.01
CACNA1A-213ENST00000593267 TSR2Q969E8 191 aaKnown RBP14.99□□□□□ -0.01
CACNA1A-213ENST00000593267 RCAN3Q9UKA8 241 aa14.99□□□□□ -0.01
CACNA1A-213ENST00000593267 MRC1P22897 1456 aa14.99□□□□□ -0.01
CACNA1A-213ENST00000593267 SPATA31A1Q5TZJ5 1347 aa14.98□□□□□ -0.01
CACNA1A-213ENST00000593267 RNF123Q5XPI4 1314 aa14.98□□□□□ -0.01
CACNA1A-213ENST00000593267 IL17REQ8NFR9 667 aa14.98□□□□□ -0.01
CACNA1A-213ENST00000593267 KDM6AO15550 1401 aaPredicted RBP14.98□□□□□ -0.01
CACNA1A-213ENST00000593267 SPATA31A5Q5VU36 1347 aa14.97□□□□□ -0.01
CACNA1A-213ENST00000593267 SPATA31A7Q8IWB4 1347 aa14.97□□□□□ -0.01
CACNA1A-213ENST00000593267 PCDH11XQ9BZA7 1347 aa14.97□□□□□ -0.01
CACNA1A-213ENST00000593267 PCDH11YQ9BZA8 1340 aa14.97□□□□□ -0.01
CACNA1A-213ENST00000593267 CHL1O00533 1208 aa14.97□□□□□ -0.01
CACNA1A-213ENST00000593267 PHKG2P15735 406 aa14.97□□□□□ -0.01
CACNA1A-213ENST00000593267 SEPT12Q8IYM1 358 aa14.97□□□□□ -0.01
CACNA1A-213ENST00000593267 MBIPQ9NS73 344 aa14.97□□□□□ -0.01
CACNA1A-213ENST00000593267 THRAP3Q9Y2W1 955 aaKnown RBP14.97□□□□□ -0.01
CACNA1A-213ENST00000593267 SUPT16HQ9Y5B9 1047 aaKnown RBP14.97□□□□□ -0.01
CACNA1A-213ENST00000593267 A0A0G2JS52 829 aa14.96□□□□□ -0.01
CACNA1A-213ENST00000593267 CYP27B1O15528 508 aa14.96□□□□□ -0.01
CACNA1A-213ENST00000593267 RNMTO43148 476 aaKnown RBP14.96□□□□□ -0.01
CACNA1A-213ENST00000593267 CT47B1P0C2W7 299 aaPredicted RBP14.96□□□□□ -0.01
CACNA1A-213ENST00000593267 MYT1Q01538 1121 aa14.96□□□□□ -0.01
CACNA1A-213ENST00000593267 VPS72Q15906 364 aa14.96□□□□□ -0.01
CACNA1A-213ENST00000593267 TNS2Q63HR2 1409 aa14.96□□□□□ -0.01
CACNA1A-213ENST00000593267 IFNL2Q8IZJ0 200 aa14.96□□□□□ -0.01
CACNA1A-213ENST00000593267 ZCRB1Q8TBF4 217 aaKnown RBP14.96□□□□□ -0.01
CACNA1A-213ENST00000593267 TOGARAM1Q9Y4F4 1720 aa14.95□□□□□ -0.02
CACNA1A-213ENST00000593267 EXOSC9Q06265 439 aaKnown RBP14.95□□□□□ -0.02
CACNA1A-213ENST00000593267 DEFB132Q7Z7B7 95 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms