RNA–Protein interactions for RNA: ENST00000593176.1

NLE1-207, Transcript of notchless homolog 1, humanhuman

TSL 3

Gene NLE1, Length 800 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-207ENST00000593176 YY1P25490 414 aa21.8■■□□□ 1.08
NLE1-207ENST00000593176 PRIM1P49642 420 aaKnown RBP21.8■■□□□ 1.08
NLE1-207ENST00000593176 DCAF8L1A6NGE4 600 aa21.78■■□□□ 1.08
NLE1-207ENST00000593176 SYT17Q9BSW7 474 aa21.78■■□□□ 1.08
NLE1-207ENST00000593176 FHDC1Q9C0D6 1143 aaPredicted RBP21.78■■□□□ 1.08
NLE1-207ENST00000593176 CLSPNQ9HAW4 1339 aa21.78■■□□□ 1.08
NLE1-207ENST00000593176 MAP3K5Q99683 1374 aa21.77■■□□□ 1.08
NLE1-207ENST00000593176 HSP90AB2PQ58FF8 381 aa21.77■■□□□ 1.08
NLE1-207ENST00000593176 UTRNP46939 3433 aa21.76■■□□□ 1.07
NLE1-207ENST00000593176 BTAF1O14981 1849 aa21.76■■□□□ 1.07
NLE1-207ENST00000593176 SLC16A10Q8TF71 515 aa21.76■■□□□ 1.07
NLE1-207ENST00000593176 FLT4P35916 1363 aa21.75■■□□□ 1.07
NLE1-207ENST00000593176 SMG6Q86US8 1419 aaKnown RBP21.75■■□□□ 1.07
NLE1-207ENST00000593176 ARXQ96QS3 562 aa21.75■■□□□ 1.07
NLE1-207ENST00000593176 MYOM1P52179 1685 aa21.75■■□□□ 1.07
NLE1-207ENST00000593176 RAPGEF4Q8WZA2 1011 aa21.74■■□□□ 1.07
NLE1-207ENST00000593176 USHBP1Q8N6Y0 703 aa21.73■■□□□ 1.07
NLE1-207ENST00000593176 SYTL4Q96C24 671 aaPredicted RBP21.73■■□□□ 1.07
NLE1-207ENST00000593176 PNPLA7Q6ZV29 1317 aa21.73■■□□□ 1.07
NLE1-207ENST00000593176 TATP17735 454 aaPredicted RBP21.71■■□□□ 1.07
NLE1-207ENST00000593176 NCAPD2Q15021 1401 aa21.71■■□□□ 1.07
NLE1-207ENST00000593176 NSD3Q9BZ95 1437 aa21.71■■□□□ 1.07
NLE1-207ENST00000593176 KCNQ4P56696 695 aa21.7■■□□□ 1.06
NLE1-207ENST00000593176 TFCP2L1Q9NZI6 479 aa21.69■■□□□ 1.06
NLE1-207ENST00000593176 EMILIN1Q9Y6C2 1016 aa21.69■■□□□ 1.06
NLE1-207ENST00000593176 PCDH11XQ9BZA7 1347 aa21.69■■□□□ 1.06
NLE1-207ENST00000593176 PCDH11YQ9BZA8 1340 aa21.69■■□□□ 1.06
NLE1-207ENST00000593176 SHANK3Q9BYB0 1731 aa21.69■■□□□ 1.06
NLE1-207ENST00000593176 WASHC2AQ641Q2 1341 aa21.67■■□□□ 1.06
NLE1-207ENST00000593176 CYP27B1O15528 508 aa21.67■■□□□ 1.06
NLE1-207ENST00000593176 CCNL1Q9UK58 526 aaPredicted RBP21.67■■□□□ 1.06
NLE1-207ENST00000593176 NKX1-1Q15270 411 aaPredicted RBP21.65■■□□□ 1.06
NLE1-207ENST00000593176 DOT1LQ8TEK3 1739 aa21.64■■□□□ 1.06
NLE1-207ENST00000593176 HMGB2P26583 209 aaKnown RBP21.63■■□□□ 1.05
NLE1-207ENST00000593176 POLKQ9UBT6 870 aa21.63■■□□□ 1.05
NLE1-207ENST00000593176 RGPD2P0DJD1 1756 aa21.63■■□□□ 1.05
NLE1-207ENST00000593176 LY75O60449 1722 aa21.63■■□□□ 1.05
NLE1-207ENST00000593176 QSER1Q2KHR3 1735 aa21.63■■□□□ 1.05
NLE1-207ENST00000593176 POLD1P28340 1107 aa21.62■■□□□ 1.05
NLE1-207ENST00000593176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.62■■□□□ 1.05
NLE1-207ENST00000593176 COL24A1Q17RW2 1714 aa21.61■■□□□ 1.05
NLE1-207ENST00000593176 COL23A1Q86Y22 540 aaPredicted RBP21.61■■□□□ 1.05
NLE1-207ENST00000593176 EYA1Q99502 592 aa21.6■■□□□ 1.05
NLE1-207ENST00000593176 KIF20BQ96Q89 1820 aa21.59■■□□□ 1.05
NLE1-207ENST00000593176 PALLDQ8WX93 1383 aa21.59■■□□□ 1.05
NLE1-207ENST00000593176 PPM1GO15355 546 aaPredicted RBP21.58■■□□□ 1.05
NLE1-207ENST00000593176 MPRIPQ6WCQ1 1025 aa21.58■■□□□ 1.05
NLE1-207ENST00000593176 ZNF784Q8NCA9 323 aaPredicted RBP21.58■■□□□ 1.05
NLE1-207ENST00000593176 PCGF6Q9BYE7 350 aa21.58■■□□□ 1.05
NLE1-207ENST00000593176 SPG7Q9UQ90 795 aa21.58■■□□□ 1.05
NLE1-207ENST00000593176 PLEKHG2Q9H7P9 1386 aa21.58■■□□□ 1.04
NLE1-207ENST00000593176 PIGBQ92521 554 aa21.57■■□□□ 1.04
NLE1-207ENST00000593176 SMARCC1Q92922 1105 aaPredicted RBP21.57■■□□□ 1.04
NLE1-207ENST00000593176 GOLGB1Q14789 3259 aaKnown RBP21.57■■□□□ 1.04
NLE1-207ENST00000593176 ANKRD26Q9UPS8 1709 aa21.57■■□□□ 1.04
NLE1-207ENST00000593176 EIF4G2P78344 907 aaKnown RBP eCLIP21.55■■□□□ 1.04
NLE1-207ENST00000593176 FLAD1Q8NFF5 587 aa21.55■■□□□ 1.04
NLE1-207ENST00000593176 PKD1L3Q7Z443 1732 aa21.54■■□□□ 1.04
NLE1-207ENST00000593176 HSPA5P11021 654 aaKnown RBP21.53■■□□□ 1.04
NLE1-207ENST00000593176 EIF4A2Q14240 407 aaKnown RBP21.53■■□□□ 1.04
NLE1-207ENST00000593176 NLGN2Q8NFZ4 835 aa21.53■■□□□ 1.04
NLE1-207ENST00000593176 PHKG2P15735 406 aa21.52■■□□□ 1.04
NLE1-207ENST00000593176 GPR162Q16538 588 aa21.52■■□□□ 1.04
NLE1-207ENST00000593176 AMIGO3Q86WK7 504 aa21.51■■□□□ 1.03
NLE1-207ENST00000593176 TOGARAM1Q9Y4F4 1720 aa21.5■■□□□ 1.03
NLE1-207ENST00000593176 MSH5O43196 834 aa21.5■■□□□ 1.03
NLE1-207ENST00000593176 IFNL2Q8IZJ0 200 aa21.5■■□□□ 1.03
NLE1-207ENST00000593176 PANK3Q9H999 370 aa21.5■■□□□ 1.03
NLE1-207ENST00000593176 IGSF1Q8N6C5 1336 aa21.5■■□□□ 1.03
NLE1-207ENST00000593176 TUBGCP6Q96RT7 1819 aa21.5■■□□□ 1.03
NLE1-207ENST00000593176 LOC102724428A0A0B4J2F2 783 aa21.48■■□□□ 1.03
NLE1-207ENST00000593176 SIK1P57059 783 aa21.48■■□□□ 1.03
NLE1-207ENST00000593176 CD2APQ9Y5K6 639 aa21.48■■□□□ 1.03
NLE1-207ENST00000593176 TNNT2P45379 298 aaPredicted RBP21.47■■□□□ 1.03
NLE1-207ENST00000593176 MSL1Q68DK7 614 aa21.47■■□□□ 1.03
NLE1-207ENST00000593176 KLHL34Q8N239 644 aa21.47■■□□□ 1.03
NLE1-207ENST00000593176 TMOD3Q9NYL9 352 aa21.47■■□□□ 1.03
NLE1-207ENST00000593176 ASAP1Q9ULH1 1129 aa21.47■■□□□ 1.03
NLE1-207ENST00000593176 C5P01031 1676 aa21.47■■□□□ 1.03
NLE1-207ENST00000593176 LINC00116Q8NCU8 138 aa21.46■■□□□ 1.03
NLE1-207ENST00000593176 AK7Q96M32 723 aa21.46■■□□□ 1.03
NLE1-207ENST00000593176 POLR3GLQ9BT43 218 aa21.46■■□□□ 1.03
NLE1-207ENST00000593176 YBX3P16989 372 aaKnown RBP eCLIP21.45■■□□□ 1.021e-8■■■□□ 18.9
NLE1-207ENST00000593176 SSFA2P28290 1259 aa21.45■■□□□ 1.02
NLE1-207ENST00000593176 ATG3Q9NT62 314 aa21.45■■□□□ 1.02
NLE1-207ENST00000593176 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.44■■□□□ 1.02
NLE1-207ENST00000593176 ITPK1Q13572 414 aa21.44■■□□□ 1.02
NLE1-207ENST00000593176 C4BP0C0L5 1744 aa21.43■■□□□ 1.02
NLE1-207ENST00000593176 KAT6BQ8WYB5 2073 aa21.43■■□□□ 1.02
NLE1-207ENST00000593176 ERVV-2B6SEH9 535 aa21.43■■□□□ 1.02
NLE1-207ENST00000593176 GRIN3BO60391 1043 aa21.43■■□□□ 1.02
NLE1-207ENST00000593176 DCAF5Q96JK2 942 aa21.42■■□□□ 1.02
NLE1-207ENST00000593176 KDRP35968 1356 aa21.4■■□□□ 1.02
NLE1-207ENST00000593176 HSP90AB1P08238 724 aaKnown RBP21.4■■□□□ 1.02
NLE1-207ENST00000593176 AMOTQ4VCS5 1084 aa21.4■■□□□ 1.02
NLE1-207ENST00000593176 SMIM5Q71RC9 77 aa21.4■■□□□ 1.02
NLE1-207ENST00000593176 MAP2P11137 1827 aaKnown RBP21.4■■□□□ 1.02
NLE1-207ENST00000593176 ATP6V1AP38606 617 aa21.39■■□□□ 1.01
NLE1-207ENST00000593176 PLEKHO1Q53GL0 409 aaPredicted RBP21.39■■□□□ 1.01
NLE1-207ENST00000593176 PELP1Q8IZL8 1130 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms