RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 SHANK3Q9BYB0 1731 aa24.89■■□□□ 1.58
CIRBP-243ENST00000593128 PPM1GO15355 546 aaPredicted RBP24.89■■□□□ 1.58
CIRBP-243ENST00000593128 HSP90AB2PQ58FF8 381 aa24.89■■□□□ 1.58
CIRBP-243ENST00000593128 DCAF8L1A6NGE4 600 aa24.88■■□□□ 1.57
CIRBP-243ENST00000593128 PRIM1P49642 420 aaKnown RBP24.88■■□□□ 1.57
CIRBP-243ENST00000593128 RAPGEF4Q8WZA2 1011 aa24.88■■□□□ 1.57
CIRBP-243ENST00000593128 CLSPNQ9HAW4 1339 aa24.87■■□□□ 1.57
CIRBP-243ENST00000593128 CCER1Q8TC90 406 aaPredicted RBP24.86■■□□□ 1.57
CIRBP-243ENST00000593128 LRRC4BQ9NT99 713 aa24.86■■□□□ 1.57
CIRBP-243ENST00000593128 PAPPAQ13219 1627 aa24.86■■□□□ 1.57
CIRBP-243ENST00000593128 FLT4P35916 1363 aa24.85■■□□□ 1.57
CIRBP-243ENST00000593128 TATP17735 454 aaPredicted RBP24.85■■□□□ 1.57
CIRBP-243ENST00000593128 KCNQ4P56696 695 aa24.85■■□□□ 1.57
CIRBP-243ENST00000593128 INSRP06213 1382 aa24.84■■□□□ 1.57
CIRBP-243ENST00000593128 ZNF827Q17R98 1081 aa24.84■■□□□ 1.57
CIRBP-243ENST00000593128 EMILIN1Q9Y6C2 1016 aa24.84■■□□□ 1.57
CIRBP-243ENST00000593128 MTFR1LQ9H019 292 aa24.83■■□□□ 1.57
CIRBP-243ENST00000593128 PTGER2P43116 358 aa24.82■■□□□ 1.56
CIRBP-243ENST00000593128 SLC27A3Q5K4L6 730 aa24.8■■□□□ 1.56
CIRBP-243ENST00000593128 CGNL1Q0VF96 1302 aa24.8■■□□□ 1.56
CIRBP-243ENST00000593128 MAP2P11137 1827 aaKnown RBP24.78■■□□□ 1.56
CIRBP-243ENST00000593128 YY1P25490 414 aa24.78■■□□□ 1.56
CIRBP-243ENST00000593128 TNNT2P45379 298 aaPredicted RBP24.78■■□□□ 1.56
CIRBP-243ENST00000593128 NSD2O96028 1365 aa24.78■■□□□ 1.56
CIRBP-243ENST00000593128 KIF24Q5T7B8 1368 aa24.78■■□□□ 1.56
CIRBP-243ENST00000593128 EIF4G2P78344 907 aaKnown RBP eCLIP24.77■■□□□ 1.56
CIRBP-243ENST00000593128 FHDC1Q9C0D6 1143 aaPredicted RBP24.77■■□□□ 1.56
CIRBP-243ENST00000593128 TFCP2L1Q9NZI6 479 aa24.77■■□□□ 1.56
CIRBP-243ENST00000593128 PCDH11XQ9BZA7 1347 aa24.77■■□□□ 1.56
CIRBP-243ENST00000593128 PCDH11YQ9BZA8 1340 aa24.77■■□□□ 1.56
CIRBP-243ENST00000593128 LY75O60449 1722 aa24.77■■□□□ 1.56
CIRBP-243ENST00000593128 HSPA5P11021 654 aaKnown RBP24.76■■□□□ 1.55
CIRBP-243ENST00000593128 AKT1S1Q96B36 256 aa24.76■■□□□ 1.55
CIRBP-243ENST00000593128 CCNL1Q9UK58 526 aaPredicted RBP24.76■■□□□ 1.55
CIRBP-243ENST00000593128 TUBGCP6Q96RT7 1819 aa24.75■■□□□ 1.55
CIRBP-243ENST00000593128 KLHL34Q8N239 644 aa24.74■■□□□ 1.55
CIRBP-243ENST00000593128 MSH5O43196 834 aa24.73■■□□□ 1.55
CIRBP-243ENST00000593128 ARXQ96QS3 562 aa24.73■■□□□ 1.55
CIRBP-243ENST00000593128 ANKRD26Q9UPS8 1709 aa24.72■■□□□ 1.55
CIRBP-243ENST00000593128 MPRIPQ6WCQ1 1025 aa24.72■■□□□ 1.55
CIRBP-243ENST00000593128 QSER1Q2KHR3 1735 aa24.72■■□□□ 1.55
CIRBP-243ENST00000593128 PNPLA7Q6ZV29 1317 aa24.71■■□□□ 1.55
CIRBP-243ENST00000593128 SGIP1Q9BQI5 828 aa24.71■■□□□ 1.55
CIRBP-243ENST00000593128 SYT17Q9BSW7 474 aa24.71■■□□□ 1.55
CIRBP-243ENST00000593128 CYP27B1O15528 508 aa24.69■■□□□ 1.54
CIRBP-243ENST00000593128 POLKQ9UBT6 870 aa24.69■■□□□ 1.54
CIRBP-243ENST00000593128 PKD1L3Q7Z443 1732 aa24.69■■□□□ 1.54
CIRBP-243ENST00000593128 WASHC2AQ641Q2 1341 aa24.68■■□□□ 1.54
CIRBP-243ENST00000593128 PANK3Q9H999 370 aa24.68■■□□□ 1.54
CIRBP-243ENST00000593128 ITGB4P16144 1822 aa24.68■■□□□ 1.54
CIRBP-243ENST00000593128 TOGARAM1Q9Y4F4 1720 aa24.67■■□□□ 1.54
CIRBP-243ENST00000593128 POLD1P28340 1107 aa24.67■■□□□ 1.54
CIRBP-243ENST00000593128 EYA1Q99502 592 aa24.67■■□□□ 1.54
CIRBP-243ENST00000593128 SPG7Q9UQ90 795 aa24.67■■□□□ 1.54
CIRBP-243ENST00000593128 C5P01031 1676 aa24.66■■□□□ 1.54
CIRBP-243ENST00000593128 SLC16A10Q8TF71 515 aa24.65■■□□□ 1.54
CIRBP-243ENST00000593128 PALLDQ8WX93 1383 aa24.65■■□□□ 1.54
CIRBP-243ENST00000593128 EIF4A2Q14240 407 aaKnown RBP24.62■■□□□ 1.53
CIRBP-243ENST00000593128 NCAPD2Q15021 1401 aa24.61■■□□□ 1.53
CIRBP-243ENST00000593128 MSL1Q68DK7 614 aa24.6■■□□□ 1.53
CIRBP-243ENST00000593128 COL23A1Q86Y22 540 aaPredicted RBP24.6■■□□□ 1.53
CIRBP-243ENST00000593128 PELP1Q8IZL8 1130 aaKnown RBP24.6■■□□□ 1.53
CIRBP-243ENST00000593128 TAF1LQ8IZX4 1826 aa24.59■■□□□ 1.53
CIRBP-243ENST00000593128 PIGBQ92521 554 aa24.59■■□□□ 1.53
CIRBP-243ENST00000593128 SMARCC1Q92922 1105 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-243ENST00000593128 MORC1Q86VD1 984 aa24.58■■□□□ 1.53
CIRBP-243ENST00000593128 GPR162Q16538 588 aa24.57■■□□□ 1.52
CIRBP-243ENST00000593128 TMOD3Q9NYL9 352 aa24.57■■□□□ 1.52
CIRBP-243ENST00000593128 IFNL2Q8IZJ0 200 aa24.56■■□□□ 1.52
CIRBP-243ENST00000593128 AK7Q96M32 723 aa24.56■■□□□ 1.52
CIRBP-243ENST00000593128 COL24A1Q17RW2 1714 aa24.55■■□□□ 1.52
CIRBP-243ENST00000593128 PHKG2P15735 406 aa24.55■■□□□ 1.52
CIRBP-243ENST00000593128 NKX1-1Q15270 411 aaPredicted RBP24.55■■□□□ 1.52
CIRBP-243ENST00000593128 KNSTRNQ9Y448 316 aa24.55■■□□□ 1.52
CIRBP-243ENST00000593128 C4BP0C0L5 1744 aa24.55■■□□□ 1.52
CIRBP-243ENST00000593128 MAP3K5Q99683 1374 aa24.54■■□□□ 1.52
CIRBP-243ENST00000593128 PHF14O94880 888 aa24.54■■□□□ 1.52
CIRBP-243ENST00000593128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.54■■□□□ 1.524e-13■□□□□ 8.8
CIRBP-243ENST00000593128 HMGB2P26583 209 aaKnown RBP24.52■■□□□ 1.52
CIRBP-243ENST00000593128 NLGN2Q8NFZ4 835 aa24.52■■□□□ 1.52
CIRBP-243ENST00000593128 SMIM5Q71RC9 77 aa24.51■■□□□ 1.51
CIRBP-243ENST00000593128 ASAP1Q9ULH1 1129 aa24.51■■□□□ 1.51
CIRBP-243ENST00000593128 IGSF1Q8N6C5 1336 aa24.51■■□□□ 1.51
CIRBP-243ENST00000593128 CHD4Q14839 1912 aa24.51■■□□□ 1.51
CIRBP-243ENST00000593128 UTRNP46939 3433 aa24.51■■□□□ 1.51
CIRBP-243ENST00000593128 LOC102724428A0A0B4J2F2 783 aa24.5■■□□□ 1.51
CIRBP-243ENST00000593128 SIK1P57059 783 aa24.5■■□□□ 1.51
CIRBP-243ENST00000593128 FLAD1Q8NFF5 587 aa24.5■■□□□ 1.51
CIRBP-243ENST00000593128 PLEKHO1Q53GL0 409 aaPredicted RBP24.48■■□□□ 1.51
CIRBP-243ENST00000593128 ATP6V1AP38606 617 aa24.47■■□□□ 1.51
CIRBP-243ENST00000593128 ZNF530Q6P9A1 599 aaPredicted RBP24.47■■□□□ 1.51
CIRBP-243ENST00000593128 AEBP1Q8IUX7 1158 aa24.47■■□□□ 1.51
CIRBP-243ENST00000593128 LINC00116Q8NCU8 138 aa24.47■■□□□ 1.51
CIRBP-243ENST00000593128 UBR3Q6ZT12 1888 aa24.47■■□□□ 1.51
CIRBP-243ENST00000593128 KIF7Q2M1P5 1343 aa24.46■■□□□ 1.51
CIRBP-243ENST00000593128 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.46■■□□□ 1.51
CIRBP-243ENST00000593128 AMIGO3Q86WK7 504 aa24.46■■□□□ 1.51
CIRBP-243ENST00000593128 CNGB1Q14028 1251 aaPredicted RBP24.45■■□□□ 1.5
CIRBP-243ENST00000593128 ATG3Q9NT62 314 aa24.45■■□□□ 1.5
CIRBP-243ENST00000593128 GNPATO15228 680 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms