RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 NME9Q86XW9 330 aa15.56■□□□□ 0.08
RANBP3-230ENST00000593025 ZNF526Q8TF50 670 aaPredicted RBP15.56■□□□□ 0.08
RANBP3-230ENST00000593025 TAF1LQ8IZX4 1826 aa15.55■□□□□ 0.08
RANBP3-230ENST00000593025 RGPD2P0DJD1 1756 aa15.55■□□□□ 0.08
RANBP3-230ENST00000593025 KIF3CO14782 793 aa15.55■□□□□ 0.08
RANBP3-230ENST00000593025 PRIM1P49642 420 aaKnown RBP15.55■□□□□ 0.08
RANBP3-230ENST00000593025 DDX54Q8TDD1 881 aaKnown RBP15.55■□□□□ 0.08
RANBP3-230ENST00000593025 CICQ96RK0 1608 aaPredicted RBP15.54■□□□□ 0.08
RANBP3-230ENST00000593025 MEGF6O75095 1541 aa15.53■□□□□ 0.08
RANBP3-230ENST00000593025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.53■□□□□ 0.08
RANBP3-230ENST00000593025 CD2APQ9Y5K6 639 aa15.53■□□□□ 0.08
RANBP3-230ENST00000593025 DNAJC5GQ8N7S2 189 aa15.52■□□□□ 0.08
RANBP3-230ENST00000593025 CCNL1Q9UK58 526 aaPredicted RBP15.52■□□□□ 0.08
RANBP3-230ENST00000593025 AMIGO3Q86WK7 504 aa15.51■□□□□ 0.07
RANBP3-230ENST00000593025 SYTL4Q96C24 671 aaPredicted RBP15.51■□□□□ 0.07
RANBP3-230ENST00000593025 KIAA1551Q9HCM1 1747 aa15.5■□□□□ 0.07
RANBP3-230ENST00000593025 UBR3Q6ZT12 1888 aa15.48■□□□□ 0.07
RANBP3-230ENST00000593025 MSH5O43196 834 aa15.48■□□□□ 0.07
RANBP3-230ENST00000593025 WWC3Q9ULE0 1092 aa15.48■□□□□ 0.07
RANBP3-230ENST00000593025 C4BP0C0L5 1744 aa15.48■□□□□ 0.07
RANBP3-230ENST00000593025 PCNTO95613 3336 aa15.47■□□□□ 0.07
RANBP3-230ENST00000593025 IP6K1Q92551 441 aa15.47■□□□□ 0.07
RANBP3-230ENST00000593025 WDR90Q96KV7 1748 aa15.47■□□□□ 0.07
RANBP3-230ENST00000593025 IGSF1Q8N6C5 1336 aa15.46■□□□□ 0.07
RANBP3-230ENST00000593025 EDC4Q6P2E9 1401 aaKnown RBP15.46■□□□□ 0.07
RANBP3-230ENST00000593025 LTV1Q96GA3 475 aaPredicted RBP15.46■□□□□ 0.07
RANBP3-230ENST00000593025 L3MBTL2Q969R5 705 aa15.45■□□□□ 0.06
RANBP3-230ENST00000593025 USP47Q96K76 1375 aa15.45■□□□□ 0.06
RANBP3-230ENST00000593025 APLP1P51693 650 aa15.44■□□□□ 0.06
RANBP3-230ENST00000593025 SMIM5Q71RC9 77 aa15.44■□□□□ 0.06
RANBP3-230ENST00000593025 ZCRB1Q8TBF4 217 aaKnown RBP15.44■□□□□ 0.06
RANBP3-230ENST00000593025 A0A1W2PP64 1363 aa15.44■□□□□ 0.06
RANBP3-230ENST00000593025 MAP2P11137 1827 aaKnown RBP15.43■□□□□ 0.06
RANBP3-230ENST00000593025 KIF13BQ9NQT8 1826 aa15.43■□□□□ 0.06
RANBP3-230ENST00000593025 MAP3K19Q56UN5 1328 aa15.43■□□□□ 0.06
RANBP3-230ENST00000593025 COL13A1Q5TAT6 717 aaPredicted RBP15.42■□□□□ 0.06
RANBP3-230ENST00000593025 SLC12A5Q9H2X9 1139 aa15.42■□□□□ 0.06
RANBP3-230ENST00000593025 ITGB4P16144 1822 aa15.42■□□□□ 0.06
RANBP3-230ENST00000593025 ROCK2O75116 1388 aaKnown RBP15.41■□□□□ 0.06
RANBP3-230ENST00000593025 PALLDQ8WX93 1383 aa15.41■□□□□ 0.06
RANBP3-230ENST00000593025 FBLN1P23142 703 aa15.41■□□□□ 0.06
RANBP3-230ENST00000593025 HOXC9P31274 260 aa15.41■□□□□ 0.06
RANBP3-230ENST00000593025 PXDNLA1KZ92 1463 aa15.4■□□□□ 0.06
RANBP3-230ENST00000593025 N4BP2Q86UW6 1770 aaPredicted RBP15.4■□□□□ 0.06
RANBP3-230ENST00000593025 FLAD1Q8NFF5 587 aa15.39■□□□□ 0.05
RANBP3-230ENST00000593025 BRCA1P38398 1863 aaKnown RBP15.38■□□□□ 0.05
RANBP3-230ENST00000593025 TOMM70O94826 608 aa15.38■□□□□ 0.05
RANBP3-230ENST00000593025 HTRA3P83110 453 aa15.38■□□□□ 0.05
RANBP3-230ENST00000593025 NBPF6Q5VWK0 638 aa15.38■□□□□ 0.05
RANBP3-230ENST00000593025 NBPF4Q96M43 638 aa15.38■□□□□ 0.05
RANBP3-230ENST00000593025 NMRK2Q9NPI5 230 aa15.38■□□□□ 0.05
RANBP3-230ENST00000593025 USHBP1Q8N6Y0 703 aa15.37■□□□□ 0.05
RANBP3-230ENST00000593025 PKD1L3Q7Z443 1732 aa15.37■□□□□ 0.05
RANBP3-230ENST00000593025 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.36■□□□□ 0.05
RANBP3-230ENST00000593025 JMYQ8N9B5 988 aa15.36■□□□□ 0.05
RANBP3-230ENST00000593025 TMC1Q8TDI8 760 aa15.36■□□□□ 0.05
RANBP3-230ENST00000593025 PHF14O94880 888 aa15.35■□□□□ 0.05
RANBP3-230ENST00000593025 HDGFL2Q7Z4V5 671 aaPredicted RBP15.35■□□□□ 0.05
RANBP3-230ENST00000593025 RTL1A6NKG5 1358 aa15.35■□□□□ 0.05
RANBP3-230ENST00000593025 KLRG1Q96E93 195 aa15.34■□□□□ 0.05
RANBP3-230ENST00000593025 CYP27B1O15528 508 aa15.33■□□□□ 0.04
RANBP3-230ENST00000593025 CAPN15O75808 1086 aa15.33■□□□□ 0.04
RANBP3-230ENST00000593025 MPRIPQ6WCQ1 1025 aa15.33■□□□□ 0.04
RANBP3-230ENST00000593025 LINC00116Q8NCU8 138 aa15.33■□□□□ 0.04
RANBP3-230ENST00000593025 AK7Q96M32 723 aa15.33■□□□□ 0.04
RANBP3-230ENST00000593025 CGNL1Q0VF96 1302 aa15.33■□□□□ 0.04
RANBP3-230ENST00000593025 C10orf71Q711Q0 1435 aa15.33■□□□□ 0.04
RANBP3-230ENST00000593025 SIN3AQ96ST3 1273 aa15.32■□□□□ 0.04
RANBP3-230ENST00000593025 SSFA2P28290 1259 aa15.31■□□□□ 0.04
RANBP3-230ENST00000593025 AMPHP49418 695 aa15.31■□□□□ 0.04
RANBP3-230ENST00000593025 RBM46Q8TBY0 533 aaKnown RBP15.31■□□□□ 0.04
RANBP3-230ENST00000593025 TERF2IPQ9NYB0 399 aa15.31■□□□□ 0.04
RANBP3-230ENST00000593025 PCDH11XQ9BZA7 1347 aa15.31■□□□□ 0.04
RANBP3-230ENST00000593025 PCDH11YQ9BZA8 1340 aa15.31■□□□□ 0.04
RANBP3-230ENST00000593025 NSD3Q9BZ95 1437 aa15.31■□□□□ 0.04
RANBP3-230ENST00000593025 ARFGEF1Q9Y6D6 1849 aa15.31■□□□□ 0.04
RANBP3-230ENST00000593025 PRELPP51888 382 aa15.3■□□□□ 0.04
RANBP3-230ENST00000593025 RRS1Q15050 365 aaKnown RBP15.3■□□□□ 0.04
RANBP3-230ENST00000593025 PIGBQ92521 554 aa15.3■□□□□ 0.04
RANBP3-230ENST00000593025 C4AP0C0L4 1744 aa15.29■□□□□ 0.04
RANBP3-230ENST00000593025 NCAPD2Q15021 1401 aa15.29■□□□□ 0.04
RANBP3-230ENST00000593025 MMP10P09238 476 aa15.29■□□□□ 0.04
RANBP3-230ENST00000593025 ITPK1Q13572 414 aa15.29■□□□□ 0.04
RANBP3-230ENST00000593025 COG3Q96JB2 828 aa15.29■□□□□ 0.04
RANBP3-230ENST00000593025 KCPQ6ZWJ8 1503 aa15.28■□□□□ 0.04
RANBP3-230ENST00000593025 A0A0G2JLW4 131 aa15.28■□□□□ 0.04
RANBP3-230ENST00000593025 RAPGEF4Q8WZA2 1011 aa15.28■□□□□ 0.04
RANBP3-230ENST00000593025 LOC102724428A0A0B4J2F2 783 aa15.27■□□□□ 0.04
RANBP3-230ENST00000593025 TATP17735 454 aaPredicted RBP15.27■□□□□ 0.04
RANBP3-230ENST00000593025 SIK1P57059 783 aa15.27■□□□□ 0.04
RANBP3-230ENST00000593025 TNS4Q8IZW8 715 aa15.27■□□□□ 0.04
RANBP3-230ENST00000593025 SMARCC1Q92922 1105 aaPredicted RBP15.27■□□□□ 0.04
RANBP3-230ENST00000593025 BCS1LQ9Y276 419 aa15.27■□□□□ 0.04
RANBP3-230ENST00000593025 TNRC6CQ9HCJ0 1690 aaKnown RBP15.27■□□□□ 0.03
RANBP3-230ENST00000593025 INSRP06213 1382 aa15.26■□□□□ 0.03
RANBP3-230ENST00000593025 HSP90AB2PQ58FF8 381 aa15.26■□□□□ 0.03
RANBP3-230ENST00000593025 PUS7Q96PZ0 661 aaKnown RBP15.26■□□□□ 0.03
RANBP3-230ENST00000593025 COL5A3P25940 1745 aaPredicted RBP15.26■□□□□ 0.03
RANBP3-230ENST00000593025 GNPATO15228 680 aa15.25■□□□□ 0.03
RANBP3-230ENST00000593025 DPEP1P16444 411 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms