RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-215ENST00000592960 COL24A1Q17RW2 1714 aa20.89■□□□□ 0.93
PKN1-215ENST00000592960 ANKRD36BQ8N2N9 1353 aa20.88■□□□□ 0.93
PKN1-215ENST00000592960 QSER1Q2KHR3 1735 aa20.88■□□□□ 0.93
PKN1-215ENST00000592960 SENP3-EIF4A1A0A087X0R7 540 aa20.87■□□□□ 0.93
PKN1-215ENST00000592960 LTV1Q96GA3 475 aaPredicted RBP20.87■□□□□ 0.93
PKN1-215ENST00000592960 TESK2Q96S53 571 aa20.87■□□□□ 0.93
PKN1-215ENST00000592960 HOXC9P31274 260 aa20.86■□□□□ 0.93
PKN1-215ENST00000592960 ZCRB1Q8TBF4 217 aaKnown RBP20.86■□□□□ 0.93
PKN1-215ENST00000592960 NSD2O96028 1365 aa20.85■□□□□ 0.93
PKN1-215ENST00000592960 MAP3K19Q56UN5 1328 aa20.85■□□□□ 0.93
PKN1-215ENST00000592960 KCNQ4P56696 695 aa20.85■□□□□ 0.93
PKN1-215ENST00000592960 USP47Q96K76 1375 aa20.85■□□□□ 0.93
PKN1-215ENST00000592960 HSPA5P11021 654 aaKnown RBP20.84■□□□□ 0.93
PKN1-215ENST00000592960 SYTL4Q96C24 671 aaPredicted RBP20.84■□□□□ 0.93
PKN1-215ENST00000592960 COG3Q96JB2 828 aa20.84■□□□□ 0.93
PKN1-215ENST00000592960 FAM208AQ9UK61 1670 aaKnown RBP20.83■□□□□ 0.93
PKN1-215ENST00000592960 SLC24A1O60721 1099 aa20.82■□□□□ 0.92
PKN1-215ENST00000592960 AMPHP49418 695 aa20.82■□□□□ 0.92
PKN1-215ENST00000592960 NLGN2Q8NFZ4 835 aa20.82■□□□□ 0.92
PKN1-215ENST00000592960 CGNL1Q0VF96 1302 aa20.81■□□□□ 0.92
PKN1-215ENST00000592960 ST20-MTHFSA0A0A6YYL1 179 aa20.81■□□□□ 0.92
PKN1-215ENST00000592960 GRIN3BO60391 1043 aa20.81■□□□□ 0.92
PKN1-215ENST00000592960 FBLN1P23142 703 aa20.81■□□□□ 0.92
PKN1-215ENST00000592960 KLHL34Q8N239 644 aa20.81■□□□□ 0.92
PKN1-215ENST00000592960 CCNL1Q9UK58 526 aaPredicted RBP20.81■□□□□ 0.92
PKN1-215ENST00000592960 GIGYF1O75420 1035 aaPredicted RBP20.8■□□□□ 0.92
PKN1-215ENST00000592960 COL23A1Q86Y22 540 aaPredicted RBP20.8■□□□□ 0.92
PKN1-215ENST00000592960 LY75O60449 1722 aa20.79■□□□□ 0.92
PKN1-215ENST00000592960 HMGB2P26583 209 aaKnown RBP20.78■□□□□ 0.92
PKN1-215ENST00000592960 NBPF6Q5VWK0 638 aa20.78■□□□□ 0.92
PKN1-215ENST00000592960 PELP1Q8IZL8 1130 aaKnown RBP20.78■□□□□ 0.92
PKN1-215ENST00000592960 NBPF4Q96M43 638 aa20.78■□□□□ 0.92
PKN1-215ENST00000592960 TUBGCP6Q96RT7 1819 aa20.78■□□□□ 0.92
PKN1-215ENST00000592960 MEGF6O75095 1541 aa20.78■□□□□ 0.92
PKN1-215ENST00000592960 YBX3P16989 372 aaKnown RBP eCLIP20.77■□□□□ 0.927e-8■■■□□ 17.6
PKN1-215ENST00000592960 RTL1A6NKG5 1358 aa20.76■□□□□ 0.91
PKN1-215ENST00000592960 FYB1O15117 783 aa20.74■□□□□ 0.91
PKN1-215ENST00000592960 FLAD1Q8NFF5 587 aa20.74■□□□□ 0.91
PKN1-215ENST00000592960 DOT1LQ8TEK3 1739 aa20.74■□□□□ 0.91
PKN1-215ENST00000592960 SHANK3Q9BYB0 1731 aa20.74■□□□□ 0.91
PKN1-215ENST00000592960 CD2APQ9Y5K6 639 aa20.74■□□□□ 0.91
PKN1-215ENST00000592960 MSH5O43196 834 aa20.73■□□□□ 0.91
PKN1-215ENST00000592960 RAPGEF4Q8WZA2 1011 aa20.73■□□□□ 0.91
PKN1-215ENST00000592960 RRS1Q15050 365 aaKnown RBP20.72■□□□□ 0.91
PKN1-215ENST00000592960 RGPD2P0DJD1 1756 aa20.72■□□□□ 0.91
PKN1-215ENST00000592960 KIF20BQ96Q89 1820 aa20.7■□□□□ 0.9
PKN1-215ENST00000592960 TATP17735 454 aaPredicted RBP20.7■□□□□ 0.9
PKN1-215ENST00000592960 USHBP1Q8N6Y0 703 aa20.7■□□□□ 0.9
PKN1-215ENST00000592960 INSRP06213 1382 aa20.69■□□□□ 0.9
PKN1-215ENST00000592960 HSP90AB2PQ58FF8 381 aa20.68■□□□□ 0.9
PKN1-215ENST00000592960 MSL1Q68DK7 614 aa20.68■□□□□ 0.9
PKN1-215ENST00000592960 GGNBP2Q9H3C7 697 aa20.68■□□□□ 0.9
PKN1-215ENST00000592960 PCDH11XQ9BZA7 1347 aa20.68■□□□□ 0.9
PKN1-215ENST00000592960 PCDH11YQ9BZA8 1340 aa20.68■□□□□ 0.9
PKN1-215ENST00000592960 KIF24Q5T7B8 1368 aa20.68■□□□□ 0.9
PKN1-215ENST00000592960 CYP27B1O15528 508 aa20.67■□□□□ 0.9
PKN1-215ENST00000592960 SMG6Q86US8 1419 aaKnown RBP20.67■□□□□ 0.9
PKN1-215ENST00000592960 MPRIPQ6WCQ1 1025 aa20.66■□□□□ 0.9
PKN1-215ENST00000592960 SMARCC1Q92922 1105 aaPredicted RBP20.66■□□□□ 0.9
PKN1-215ENST00000592960 PALLDQ8WX93 1383 aa20.66■□□□□ 0.9
PKN1-215ENST00000592960 TMF1P82094 1093 aa20.65■□□□□ 0.9
PKN1-215ENST00000592960 IFFO2Q5TF58 517 aa20.65■□□□□ 0.9
PKN1-215ENST00000592960 ATP10DQ9P241 1426 aa20.63■□□□□ 0.89
PKN1-215ENST00000592960 FLT4P35916 1363 aa20.63■□□□□ 0.89
PKN1-215ENST00000592960 NKX1-1Q15270 411 aaPredicted RBP20.63■□□□□ 0.89
PKN1-215ENST00000592960 C5P01031 1676 aa20.62■□□□□ 0.89
PKN1-215ENST00000592960 ADCY9O60503 1353 aa20.61■□□□□ 0.89
PKN1-215ENST00000592960 WASHC2AQ641Q2 1341 aa20.61■□□□□ 0.89
PKN1-215ENST00000592960 AMIGO3Q86WK7 504 aa20.61■□□□□ 0.89
PKN1-215ENST00000592960 PIGBQ92521 554 aa20.61■□□□□ 0.89
PKN1-215ENST00000592960 TAF1LQ8IZX4 1826 aa20.6■□□□□ 0.89
PKN1-215ENST00000592960 DIEXFQ68CQ4 756 aaKnown RBP20.6■□□□□ 0.89
PKN1-215ENST00000592960 AK7Q96M32 723 aa20.6■□□□□ 0.89
PKN1-215ENST00000592960 GPBP1L1Q9HC44 474 aaPredicted RBP20.6■□□□□ 0.89
PKN1-215ENST00000592960 KIF7Q2M1P5 1343 aa20.58■□□□□ 0.89
PKN1-215ENST00000592960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.58■□□□□ 0.89
PKN1-215ENST00000592960 SSFA2P28290 1259 aa20.58■□□□□ 0.89
PKN1-215ENST00000592960 CDCA8Q53HL2 280 aa20.58■□□□□ 0.89
PKN1-215ENST00000592960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.58■□□□□ 0.89
PKN1-215ENST00000592960 NCAPD2Q15021 1401 aa20.58■□□□□ 0.88
PKN1-215ENST00000592960 CARD14Q9BXL6 1004 aa20.57■□□□□ 0.88
PKN1-215ENST00000592960 ANKRD26Q9UPS8 1709 aa20.57■□□□□ 0.88
PKN1-215ENST00000592960 C4BP0C0L5 1744 aa20.56■□□□□ 0.88
PKN1-215ENST00000592960 NSD3Q9BZ95 1437 aa20.56■□□□□ 0.88
PKN1-215ENST00000592960 LOC102724428A0A0B4J2F2 783 aa20.56■□□□□ 0.88
PKN1-215ENST00000592960 SIK1P57059 783 aa20.56■□□□□ 0.88
PKN1-215ENST00000592960 POLR3GLQ9BT43 218 aa20.56■□□□□ 0.88
PKN1-215ENST00000592960 SPG7Q9UQ90 795 aa20.56■□□□□ 0.88
PKN1-215ENST00000592960 IGSF1Q8N6C5 1336 aa20.55■□□□□ 0.88
PKN1-215ENST00000592960 HSPA6P17066 643 aa20.55■□□□□ 0.88
PKN1-215ENST00000592960 DDX10Q13206 875 aaKnown RBP20.55■□□□□ 0.88
PKN1-215ENST00000592960 EMILIN1Q9Y6C2 1016 aa20.55■□□□□ 0.88
PKN1-215ENST00000592960 ITGB4P16144 1822 aa20.55■□□□□ 0.88
PKN1-215ENST00000592960 SMIM5Q71RC9 77 aa20.54■□□□□ 0.88
PKN1-215ENST00000592960 UBR3Q6ZT12 1888 aa20.54■□□□□ 0.88
PKN1-215ENST00000592960 PHF14O94880 888 aa20.53■□□□□ 0.88
PKN1-215ENST00000592960 LINC00116Q8NCU8 138 aa20.53■□□□□ 0.88
PKN1-215ENST00000592960 TOGARAM1Q9Y4F4 1720 aa20.53■□□□□ 0.88
PKN1-215ENST00000592960 MAP2P11137 1827 aaKnown RBP20.52■□□□□ 0.88
PKN1-215ENST00000592960 PKD1L3Q7Z443 1732 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms