RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 DDX54Q8TDD1 881 aaKnown RBP18.42■□□□□ 0.54
APOC1-209ENST00000592885 CARD14Q9BXL6 1004 aa18.42■□□□□ 0.54
APOC1-209ENST00000592885 SLC27A3Q5K4L6 730 aa18.41■□□□□ 0.54
APOC1-209ENST00000592885 NBPF6Q5VWK0 638 aa18.41■□□□□ 0.54
APOC1-209ENST00000592885 NBPF4Q96M43 638 aa18.41■□□□□ 0.54
APOC1-209ENST00000592885 PKD1L3Q7Z443 1732 aa18.4■□□□□ 0.54
APOC1-209ENST00000592885 RAPGEF4Q8WZA2 1011 aa18.4■□□□□ 0.54
APOC1-209ENST00000592885 NCAPD2Q15021 1401 aa18.4■□□□□ 0.54
APOC1-209ENST00000592885 NSD2O96028 1365 aa18.39■□□□□ 0.53
APOC1-209ENST00000592885 TATP17735 454 aaPredicted RBP18.38■□□□□ 0.53
APOC1-209ENST00000592885 HSP90AB2PQ58FF8 381 aa18.38■□□□□ 0.53
APOC1-209ENST00000592885 MTFR1LQ9H019 292 aa18.38■□□□□ 0.53
APOC1-209ENST00000592885 PCDH11XQ9BZA7 1347 aa18.38■□□□□ 0.53
APOC1-209ENST00000592885 PCDH11YQ9BZA8 1340 aa18.38■□□□□ 0.53
APOC1-209ENST00000592885 MAP2P11137 1827 aaKnown RBP18.37■□□□□ 0.53
APOC1-209ENST00000592885 ZBTB7AO95365 584 aa18.37■□□□□ 0.53
APOC1-209ENST00000592885 EIF4G2P78344 907 aaKnown RBP eCLIP18.37■□□□□ 0.53
APOC1-209ENST00000592885 PDGFDQ9GZP0 370 aaPredicted RBP18.37■□□□□ 0.53
APOC1-209ENST00000592885 PTGER2P43116 358 aa18.36■□□□□ 0.53
APOC1-209ENST00000592885 USHBP1Q8N6Y0 703 aa18.36■□□□□ 0.53
APOC1-209ENST00000592885 TUBGCP6Q96RT7 1819 aa18.35■□□□□ 0.53
APOC1-209ENST00000592885 COL24A1Q17RW2 1714 aa18.35■□□□□ 0.53
APOC1-209ENST00000592885 PRIM1P49642 420 aaKnown RBP18.35■□□□□ 0.53
APOC1-209ENST00000592885 SYTL4Q96C24 671 aaPredicted RBP18.35■□□□□ 0.53
APOC1-209ENST00000592885 LRRC4BQ9NT99 713 aa18.35■□□□□ 0.53
APOC1-209ENST00000592885 EMILIN1Q9Y6C2 1016 aa18.35■□□□□ 0.53
APOC1-209ENST00000592885 PLEKHG2Q9H7P9 1386 aa18.34■□□□□ 0.53
APOC1-209ENST00000592885 WASHC2AQ641Q2 1341 aa18.34■□□□□ 0.53
APOC1-209ENST00000592885 DCAF8L1A6NGE4 600 aa18.34■□□□□ 0.53
APOC1-209ENST00000592885 ZNF827Q17R98 1081 aa18.34■□□□□ 0.53
APOC1-209ENST00000592885 CCER1Q8TC90 406 aaPredicted RBP18.34■□□□□ 0.53
APOC1-209ENST00000592885 AKT1S1Q96B36 256 aa18.34■□□□□ 0.53
APOC1-209ENST00000592885 HMGB2P26583 209 aaKnown RBP18.33■□□□□ 0.52
APOC1-209ENST00000592885 TOGARAM1Q9Y4F4 1720 aa18.32■□□□□ 0.52
APOC1-209ENST00000592885 SGIP1Q9BQI5 828 aa18.32■□□□□ 0.52
APOC1-209ENST00000592885 C5P01031 1676 aa18.31■□□□□ 0.52
APOC1-209ENST00000592885 HSPA5P11021 654 aaKnown RBP18.31■□□□□ 0.52
APOC1-209ENST00000592885 SLC16A10Q8TF71 515 aa18.31■□□□□ 0.52
APOC1-209ENST00000592885 ATF5Q9Y2D1 282 aaPredicted RBP18.31■□□□□ 0.52
APOC1-209ENST00000592885 MAP3K5Q99683 1374 aa18.3■□□□□ 0.52
APOC1-209ENST00000592885 ITGB4P16144 1822 aa18.3■□□□□ 0.52
APOC1-209ENST00000592885 POLR3GLQ9BT43 218 aa18.29■□□□□ 0.52
APOC1-209ENST00000592885 POLKQ9UBT6 870 aa18.29■□□□□ 0.52
APOC1-209ENST00000592885 PNPLA7Q6ZV29 1317 aa18.28■□□□□ 0.52
APOC1-209ENST00000592885 PPM1GO15355 546 aaPredicted RBP18.28■□□□□ 0.52
APOC1-209ENST00000592885 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.28■□□□□ 0.52
APOC1-209ENST00000592885 CCNL1Q9UK58 526 aaPredicted RBP18.28■□□□□ 0.52
APOC1-209ENST00000592885 TAF1LQ8IZX4 1826 aa18.28■□□□□ 0.52
APOC1-209ENST00000592885 CYP27B1O15528 508 aa18.27■□□□□ 0.52
APOC1-209ENST00000592885 SPG7Q9UQ90 795 aa18.27■□□□□ 0.52
APOC1-209ENST00000592885 ARXQ96QS3 562 aa18.26■□□□□ 0.51
APOC1-209ENST00000592885 TFCP2L1Q9NZI6 479 aa18.26■□□□□ 0.51
APOC1-209ENST00000592885 NKX1-1Q15270 411 aaPredicted RBP18.25■□□□□ 0.51
APOC1-209ENST00000592885 EYA1Q99502 592 aa18.25■□□□□ 0.51
APOC1-209ENST00000592885 SYT17Q9BSW7 474 aa18.25■□□□□ 0.51
APOC1-209ENST00000592885 FHDC1Q9C0D6 1143 aaPredicted RBP18.25■□□□□ 0.51
APOC1-209ENST00000592885 PALLDQ8WX93 1383 aa18.25■□□□□ 0.51
APOC1-209ENST00000592885 SMARCC1Q92922 1105 aaPredicted RBP18.24■□□□□ 0.51
APOC1-209ENST00000592885 PANK3Q9H999 370 aa18.24■□□□□ 0.51
APOC1-209ENST00000592885 YY1P25490 414 aa18.23■□□□□ 0.51
APOC1-209ENST00000592885 POLD1P28340 1107 aa18.23■□□□□ 0.51
APOC1-209ENST00000592885 EIF4A2Q14240 407 aaKnown RBP18.22■□□□□ 0.51
APOC1-209ENST00000592885 C4BP0C0L5 1744 aa18.22■□□□□ 0.51
APOC1-209ENST00000592885 IGSF1Q8N6C5 1336 aa18.22■□□□□ 0.51
APOC1-209ENST00000592885 KCNQ4P56696 695 aa18.21■□□□□ 0.51
APOC1-209ENST00000592885 MPRIPQ6WCQ1 1025 aa18.21■□□□□ 0.51
APOC1-209ENST00000592885 TNNT2P45379 298 aaPredicted RBP18.2■□□□□ 0.5
APOC1-209ENST00000592885 IFNL2Q8IZJ0 200 aa18.2■□□□□ 0.5
APOC1-209ENST00000592885 FLAD1Q8NFF5 587 aa18.19■□□□□ 0.5
APOC1-209ENST00000592885 PHKG2P15735 406 aa18.18■□□□□ 0.5
APOC1-209ENST00000592885 ZNF831Q5JPB2 1677 aa18.18■□□□□ 0.5
APOC1-209ENST00000592885 UBR3Q6ZT12 1888 aa18.18■□□□□ 0.5
APOC1-209ENST00000592885 CHD4Q14839 1912 aa18.17■□□□□ 0.5
APOC1-209ENST00000592885 MORC1Q86VD1 984 aa18.17■□□□□ 0.5
APOC1-209ENST00000592885 PIGBQ92521 554 aa18.17■□□□□ 0.5
APOC1-209ENST00000592885 TMOD3Q9NYL9 352 aa18.17■□□□□ 0.5
APOC1-209ENST00000592885 KNSTRNQ9Y448 316 aa18.17■□□□□ 0.5
APOC1-209ENST00000592885 COL23A1Q86Y22 540 aaPredicted RBP18.15■□□□□ 0.5
APOC1-209ENST00000592885 HSP90AB1P08238 724 aaKnown RBP18.14■□□□□ 0.49
APOC1-209ENST00000592885 KIF7Q2M1P5 1343 aa18.14■□□□□ 0.49
APOC1-209ENST00000592885 MSH5O43196 834 aa18.13■□□□□ 0.49
APOC1-209ENST00000592885 AMOTQ4VCS5 1084 aa18.13■□□□□ 0.49
APOC1-209ENST00000592885 AK7Q96M32 723 aa18.13■□□□□ 0.49
APOC1-209ENST00000592885 LOC102724428A0A0B4J2F2 783 aa18.12■□□□□ 0.49
APOC1-209ENST00000592885 SIK1P57059 783 aa18.12■□□□□ 0.49
APOC1-209ENST00000592885 PLEKHO1Q53GL0 409 aaPredicted RBP18.12■□□□□ 0.49
APOC1-209ENST00000592885 DCAF5Q96JK2 942 aa18.12■□□□□ 0.49
APOC1-209ENST00000592885 KDRP35968 1356 aa18.12■□□□□ 0.49
APOC1-209ENST00000592885 ERVV-2B6SEH9 535 aa18.11■□□□□ 0.49
APOC1-209ENST00000592885 AMER1Q5JTC6 1135 aaPredicted RBP18.11■□□□□ 0.49
APOC1-209ENST00000592885 SSFA2P28290 1259 aa18.1■□□□□ 0.49
APOC1-209ENST00000592885 COL5A3P25940 1745 aaPredicted RBP18.09■□□□□ 0.49
APOC1-209ENST00000592885 KDM6AO15550 1401 aaPredicted RBP18.09■□□□□ 0.49
APOC1-209ENST00000592885 KLHL34Q8N239 644 aa18.09■□□□□ 0.49
APOC1-209ENST00000592885 CICQ96RK0 1608 aaPredicted RBP18.09■□□□□ 0.49
APOC1-209ENST00000592885 ZNF530Q6P9A1 599 aaPredicted RBP18.08■□□□□ 0.48
APOC1-209ENST00000592885 ASAP1Q9ULH1 1129 aa18.08■□□□□ 0.48
APOC1-209ENST00000592885 IL13P35225 146 aa18.07■□□□□ 0.48
APOC1-209ENST00000592885 ATP6V1AP38606 617 aa18.07■□□□□ 0.48
APOC1-209ENST00000592885 GPR162Q16538 588 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms