RNA–Protein interactions for RNA: ENST00000592812.1

LDLRAD4-217, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-217ENST00000592812 NCAPD2Q15021 1401 aa16.53■□□□□ 0.24
LDLRAD4-217ENST00000592812 TMPOP42166 694 aaKnown RBP16.53■□□□□ 0.24
LDLRAD4-217ENST00000592812 RIPK4P57078 832 aa16.53■□□□□ 0.24
LDLRAD4-217ENST00000592812 NFE2L2Q16236 605 aa16.53■□□□□ 0.24
LDLRAD4-217ENST00000592812 MTHFSDQ2M296 383 aaKnown RBP16.53■□□□□ 0.24
LDLRAD4-217ENST00000592812 AMOTQ4VCS5 1084 aa16.53■□□□□ 0.24
LDLRAD4-217ENST00000592812 SPG7Q9UQ90 795 aa16.53■□□□□ 0.24
LDLRAD4-217ENST00000592812 GAS2L2Q8NHY3 880 aa16.52■□□□□ 0.24
LDLRAD4-217ENST00000592812 ZCRB1Q8TBF4 217 aaKnown RBP16.52■□□□□ 0.24
LDLRAD4-217ENST00000592812 CDCA7Q9BWT1 371 aaPredicted RBP16.52■□□□□ 0.24
LDLRAD4-217ENST00000592812 FAM98CQ17RN3 349 aaKnown RBP16.51■□□□□ 0.23
LDLRAD4-217ENST00000592812 ZNF530Q6P9A1 599 aaPredicted RBP16.51■□□□□ 0.23
LDLRAD4-217ENST00000592812 BARGINQ6ZT62 677 aa16.51■□□□□ 0.23
LDLRAD4-217ENST00000592812 A0A0G2JS52 829 aa16.5■□□□□ 0.23
LDLRAD4-217ENST00000592812 EXOC5O00471 708 aa16.5■□□□□ 0.23
LDLRAD4-217ENST00000592812 MYT1Q01538 1121 aa16.5■□□□□ 0.23
LDLRAD4-217ENST00000592812 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.5■□□□□ 0.23
LDLRAD4-217ENST00000592812 ATRNO75882 1429 aa16.5■□□□□ 0.23
LDLRAD4-217ENST00000592812 C1orf141Q5JVX7 400 aa16.49■□□□□ 0.23
LDLRAD4-217ENST00000592812 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.49■□□□□ 0.23
LDLRAD4-217ENST00000592812 MEGF6O75095 1541 aa16.49■□□□□ 0.23
LDLRAD4-217ENST00000592812 DDX54Q8TDD1 881 aaKnown RBP16.48■□□□□ 0.23
LDLRAD4-217ENST00000592812 DDB1Q16531 1140 aa16.47■□□□□ 0.23
LDLRAD4-217ENST00000592812 NGEFQ8N5V2 710 aa16.47■□□□□ 0.23
LDLRAD4-217ENST00000592812 RTF1Q92541 710 aaKnown RBP16.47■□□□□ 0.23
LDLRAD4-217ENST00000592812 RGS17Q9UGC6 210 aaPredicted RBP16.47■□□□□ 0.23
LDLRAD4-217ENST00000592812 OVOS2A0A0G2JMS6 1433 aa16.46■□□□□ 0.23
LDLRAD4-217ENST00000592812 GNAT3A8MTJ3 354 aa16.46■□□□□ 0.23
LDLRAD4-217ENST00000592812 RBM6P78332 1123 aaKnown RBP16.46■□□□□ 0.23
LDLRAD4-217ENST00000592812 AKAP4Q5JQC9 854 aa16.46■□□□□ 0.23
LDLRAD4-217ENST00000592812 IFNL2Q8IZJ0 200 aa16.46■□□□□ 0.23
LDLRAD4-217ENST00000592812 RXRBP28702 533 aa16.45■□□□□ 0.22
LDLRAD4-217ENST00000592812 LMOD3Q0VAK6 560 aa16.45■□□□□ 0.22
LDLRAD4-217ENST00000592812 TRIM35Q9UPQ4 493 aa16.45■□□□□ 0.22
LDLRAD4-217ENST00000592812 DISP2A7MBM2 1401 aa16.45■□□□□ 0.22
LDLRAD4-217ENST00000592812 CYP27B1O15528 508 aa16.44■□□□□ 0.22
LDLRAD4-217ENST00000592812 HTATSF1O43719 755 aaKnown RBP16.44■□□□□ 0.22
LDLRAD4-217ENST00000592812 ONECUT3O60422 494 aaPredicted RBP16.44■□□□□ 0.22
LDLRAD4-217ENST00000592812 PHKG2P15735 406 aa16.44■□□□□ 0.22
LDLRAD4-217ENST00000592812 DCTN1Q14203 1278 aa16.44■□□□□ 0.22
LDLRAD4-217ENST00000592812 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
LDLRAD4-217ENST00000592812 POTEAQ6S8J7 498 aa16.44■□□□□ 0.22
LDLRAD4-217ENST00000592812 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
LDLRAD4-217ENST00000592812 PCDH11XQ9BZA7 1347 aa16.44■□□□□ 0.22
LDLRAD4-217ENST00000592812 PCDH11YQ9BZA8 1340 aa16.44■□□□□ 0.22
LDLRAD4-217ENST00000592812 PARP4Q9UKK3 1724 aaKnown RBP16.43■□□□□ 0.22
LDLRAD4-217ENST00000592812 KAT6BQ8WYB5 2073 aa16.43■□□□□ 0.22
LDLRAD4-217ENST00000592812 PDE3BQ13370 1112 aa16.43■□□□□ 0.22
LDLRAD4-217ENST00000592812 CCDC27Q2M243 656 aa16.43■□□□□ 0.22
LDLRAD4-217ENST00000592812 MPRIPQ6WCQ1 1025 aa16.43■□□□□ 0.22
LDLRAD4-217ENST00000592812 MCM10Q7L590 875 aa16.43■□□□□ 0.22
LDLRAD4-217ENST00000592812 SEPT12Q8IYM1 358 aa16.43■□□□□ 0.22
LDLRAD4-217ENST00000592812 MAP3K5Q99683 1374 aa16.42■□□□□ 0.22
LDLRAD4-217ENST00000592812 PLEKHG2Q9H7P9 1386 aa16.42■□□□□ 0.22
LDLRAD4-217ENST00000592812 IL17REQ8NFR9 667 aa16.42■□□□□ 0.22
LDLRAD4-217ENST00000592812 THUMPD2Q9BTF0 503 aaKnown RBP16.42■□□□□ 0.22
LDLRAD4-217ENST00000592812 LGR6Q9HBX8 967 aa16.42■□□□□ 0.22
LDLRAD4-217ENST00000592812 DLG5Q8TDM6 1919 aa16.42■□□□□ 0.22
LDLRAD4-217ENST00000592812 GLI3P10071 1580 aa16.42■□□□□ 0.22
LDLRAD4-217ENST00000592812 RNMTO43148 476 aaKnown RBP16.41■□□□□ 0.22
LDLRAD4-217ENST00000592812 HSP90AB1P08238 724 aaKnown RBP16.41■□□□□ 0.22
LDLRAD4-217ENST00000592812 ZBED9Q6R2W3 1325 aa16.41■□□□□ 0.22
LDLRAD4-217ENST00000592812 WDR63Q8IWG1 891 aa16.4■□□□□ 0.22
LDLRAD4-217ENST00000592812 MARCH10Q8NA82 808 aaPredicted RBP16.4■□□□□ 0.22
LDLRAD4-217ENST00000592812 DCAF5Q96JK2 942 aa16.39■□□□□ 0.21
LDLRAD4-217ENST00000592812 LAS1LQ9Y4W2 734 aaKnown RBP16.39■□□□□ 0.21
LDLRAD4-217ENST00000592812 WNK3Q9BYP7 1800 aa16.38■□□□□ 0.21
LDLRAD4-217ENST00000592812 CALD1Q05682 793 aaKnown RBP16.38■□□□□ 0.21
LDLRAD4-217ENST00000592812 GOLGA2Q08379 1002 aa16.38■□□□□ 0.21
LDLRAD4-217ENST00000592812 NKX1-1Q15270 411 aaPredicted RBP16.38■□□□□ 0.21
LDLRAD4-217ENST00000592812 PKD1L3Q7Z443 1732 aa16.38■□□□□ 0.21
LDLRAD4-217ENST00000592812 TEFQ10587 303 aa16.37■□□□□ 0.21
LDLRAD4-217ENST00000592812 ZNF521Q96K83 1311 aa16.37■□□□□ 0.21
LDLRAD4-217ENST00000592812 TNS2Q63HR2 1409 aa16.36■□□□□ 0.21
LDLRAD4-217ENST00000592812 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
LDLRAD4-217ENST00000592812 CABP4P57796 275 aa16.35■□□□□ 0.21
LDLRAD4-217ENST00000592812 TAF7Q15545 349 aaPredicted RBP16.35■□□□□ 0.21
LDLRAD4-217ENST00000592812 FAM182BQ5T319 152 aa16.35■□□□□ 0.21
LDLRAD4-217ENST00000592812 KRT27Q7Z3Y8 459 aa16.35■□□□□ 0.21
LDLRAD4-217ENST00000592812 ERVV-2B6SEH9 535 aa16.34■□□□□ 0.21
LDLRAD4-217ENST00000592812 GNAI1P63096 354 aa16.34■□□□□ 0.21
LDLRAD4-217ENST00000592812 NFATC2IPQ8NCF5 419 aa16.34■□□□□ 0.21
LDLRAD4-217ENST00000592812 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
LDLRAD4-217ENST00000592812 MIS18AQ9NYP9 233 aa16.34■□□□□ 0.21
LDLRAD4-217ENST00000592812 IL16Q14005 1332 aa16.34■□□□□ 0.21
LDLRAD4-217ENST00000592812 THSD7AQ9UPZ6 1657 aa16.34■□□□□ 0.21
LDLRAD4-217ENST00000592812 SHANK3Q9BYB0 1731 aa16.33■□□□□ 0.21
LDLRAD4-217ENST00000592812 SLFN5Q08AF3 891 aa16.33■□□□□ 0.2
LDLRAD4-217ENST00000592812 ACSBG1Q96GR2 724 aa16.33■□□□□ 0.2
LDLRAD4-217ENST00000592812 SLC52A2Q9HAB3 445 aa16.33■□□□□ 0.2
LDLRAD4-217ENST00000592812 LRRC37A3O60309 1634 aa16.33■□□□□ 0.2
LDLRAD4-217ENST00000592812 E9PSI1 815 aa16.32■□□□□ 0.2
LDLRAD4-217ENST00000592812 KDM6AO15550 1401 aaPredicted RBP16.32■□□□□ 0.2
LDLRAD4-217ENST00000592812 PRIM1P49642 420 aaKnown RBP16.32■□□□□ 0.2
LDLRAD4-217ENST00000592812 CEMIPQ8WUJ3 1361 aa16.32■□□□□ 0.2
LDLRAD4-217ENST00000592812 SYTL4Q96C24 671 aaPredicted RBP16.32■□□□□ 0.2
LDLRAD4-217ENST00000592812 CFAP44Q96MT7 982 aa16.32■□□□□ 0.2
LDLRAD4-217ENST00000592812 MYH16Q9H6N6 1097 aa16.32■□□□□ 0.2
LDLRAD4-217ENST00000592812 IFT57Q9NWB7 429 aa16.32■□□□□ 0.2
LDLRAD4-217ENST00000592812 BTBD11A6QL63 1104 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms