RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 ANKLE1Q8NAG6 615 aa10.81□□□□□ -0.68
VMP1-215ENST00000592619 C1orf216Q8TAB5 229 aa10.81□□□□□ -0.68
VMP1-215ENST00000592619 MAP4K5Q9Y4K4 846 aa10.81□□□□□ -0.68
VMP1-215ENST00000592619 RNF223E7ERA6 249 aa10.8□□□□□ -0.68
VMP1-215ENST00000592619 PPEF1O14829 653 aaPredicted RBP10.8□□□□□ -0.68
VMP1-215ENST00000592619 VARSP26640 1264 aaKnown RBP10.8□□□□□ -0.68
VMP1-215ENST00000592619 TRIM32Q13049 653 aa10.8□□□□□ -0.68
VMP1-215ENST00000592619 CCDC102BQ68D86 513 aa10.8□□□□□ -0.68
VMP1-215ENST00000592619 Q6ZNB5 142 aa10.8□□□□□ -0.68
VMP1-215ENST00000592619 GGCXP38435 758 aa10.79□□□□□ -0.68
VMP1-215ENST00000592619 KCTD15Q96SI1 283 aaPredicted RBP10.79□□□□□ -0.68
VMP1-215ENST00000592619 RBM19Q9Y4C8 960 aaKnown RBP10.79□□□□□ -0.68
VMP1-215ENST00000592619 PCDHB11Q9Y5F2 797 aa10.79□□□□□ -0.68
VMP1-215ENST00000592619 RPIAP49247 311 aa10.77□□□□□ -0.69
VMP1-215ENST00000592619 TPCN2Q8NHX9 752 aa10.77□□□□□ -0.69
VMP1-215ENST00000592619 SKOR1P84550 965 aa10.76□□□□□ -0.69
VMP1-215ENST00000592619 PLA2G2CQ5R387 149 aa10.76□□□□□ -0.69
VMP1-215ENST00000592619 M0R2N6 131 aa10.75□□□□□ -0.69
VMP1-215ENST00000592619 OCLNQ16625 522 aa10.75□□□□□ -0.69
VMP1-215ENST00000592619 MYCP01106 439 aaPredicted RBP10.74□□□□□ -0.69
VMP1-215ENST00000592619 PSME1Q06323 249 aa10.74□□□□□ -0.69
VMP1-215ENST00000592619 INTS6LQ5JSJ4 861 aaKnown RBP10.74□□□□□ -0.69
VMP1-215ENST00000592619 FOXD4L5Q5VV16 416 aaPredicted RBP10.74□□□□□ -0.69
VMP1-215ENST00000592619 TAS1R3Q7RTX0 852 aa10.74□□□□□ -0.69
VMP1-215ENST00000592619 FOXD4L4Q8WXT5 416 aaPredicted RBP10.74□□□□□ -0.69
VMP1-215ENST00000592619 CDK15Q96Q40 435 aa10.74□□□□□ -0.69
VMP1-215ENST00000592619 CXXC1Q9P0U4 656 aaPredicted RBP10.74□□□□□ -0.69
VMP1-215ENST00000592619 AMOTL2Q9Y2J4 779 aa10.74□□□□□ -0.69
VMP1-215ENST00000592619 SFI1A8K8P3 1242 aa10.73□□□□□ -0.69
VMP1-215ENST00000592619 VASH1Q7L8A9 365 aaPredicted RBP10.73□□□□□ -0.69
VMP1-215ENST00000592619 MPNDQ8N594 471 aa10.73□□□□□ -0.69
VMP1-215ENST00000592619 TRIM52Q96A61 297 aa10.73□□□□□ -0.69
VMP1-215ENST00000592619 SOWAHDA6NJG2 315 aa10.71□□□□□ -0.69
VMP1-215ENST00000592619 ERVH48-1M5A8F1 160 aa10.71□□□□□ -0.69
VMP1-215ENST00000592619 PRMT3O60678 531 aa10.71□□□□□ -0.69
VMP1-215ENST00000592619 ERVK-9P63128 1117 aa10.71□□□□□ -0.69
VMP1-215ENST00000592619 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.71□□□□□ -0.69
VMP1-215ENST00000592619 CD2BP2O95400 341 aaKnown RBP10.7□□□□□ -0.7
VMP1-215ENST00000592619 PPP1R18Q6NYC8 613 aa10.7□□□□□ -0.7
VMP1-215ENST00000592619 SCTRP47872 440 aa10.69□□□□□ -0.7
VMP1-215ENST00000592619 SERPINB4P48594 390 aa10.69□□□□□ -0.7
VMP1-215ENST00000592619 RAB15P59190 212 aa10.69□□□□□ -0.7
VMP1-215ENST00000592619 EHBP1Q8NDI1 1231 aa10.69□□□□□ -0.7
VMP1-215ENST00000592619 PRIMPOLQ96LW4 560 aa10.69□□□□□ -0.7
VMP1-215ENST00000592619 WEE1P30291 646 aa10.68□□□□□ -0.7
VMP1-215ENST00000592619 DHX9Q08211 1270 aaKnown RBP10.68□□□□□ -0.7
VMP1-215ENST00000592619 RC3H1Q5TC82 1133 aaKnown RBP10.68□□□□□ -0.7
VMP1-215ENST00000592619 CC2D2BQ6DHV5 1058 aa10.68□□□□□ -0.7
VMP1-215ENST00000592619 HINFPQ9BQA5 517 aa10.68□□□□□ -0.7
VMP1-215ENST00000592619 EGFL7Q9UHF1 273 aa10.68□□□□□ -0.7
VMP1-215ENST00000592619 GRM5P41594 1212 aa10.67□□□□□ -0.7
VMP1-215ENST00000592619 ESF1Q9H501 851 aaKnown RBP10.67□□□□□ -0.7
VMP1-215ENST00000592619 WASLO00401 505 aaPredicted RBP10.66□□□□□ -0.7
VMP1-215ENST00000592619 ERCC3P19447 782 aa10.66□□□□□ -0.7
VMP1-215ENST00000592619 TSEN2Q8NCE0 465 aaKnown RBP10.66□□□□□ -0.7
VMP1-215ENST00000592619 TMEM229AB2RXF0 380 aa10.65□□□□□ -0.7
VMP1-215ENST00000592619 LCE2BO14633 110 aa10.65□□□□□ -0.7
VMP1-215ENST00000592619 SIAH2O43255 324 aa10.65□□□□□ -0.7
VMP1-215ENST00000592619 SCNN1AP37088 669 aa10.65□□□□□ -0.7
VMP1-215ENST00000592619 ARID5BQ14865 1188 aa10.65□□□□□ -0.7
VMP1-215ENST00000592619 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
VMP1-215ENST00000592619 OSBPL3Q9H4L5 887 aa10.65□□□□□ -0.7
VMP1-215ENST00000592619 ZNF358Q9NW07 568 aa10.65□□□□□ -0.7
VMP1-215ENST00000592619 BACH1O14867 736 aa10.63□□□□□ -0.71
VMP1-215ENST00000592619 FSHRP23945 695 aa10.63□□□□□ -0.71
VMP1-215ENST00000592619 SCNN1DP51172 638 aa10.63□□□□□ -0.71
VMP1-215ENST00000592619 NR5A1Q13285 461 aa10.63□□□□□ -0.71
VMP1-215ENST00000592619 LIAT1Q6ZQX7 453 aa10.63□□□□□ -0.71
VMP1-215ENST00000592619 COL26A1Q96A83 441 aa10.63□□□□□ -0.71
VMP1-215ENST00000592619 PTCD1O75127 700 aaKnown RBP10.62□□□□□ -0.71
VMP1-215ENST00000592619 RBM25P49756 843 aaKnown RBP10.62□□□□□ -0.71
VMP1-215ENST00000592619 DNAJC14Q6Y2X3 702 aaPredicted RBP10.62□□□□□ -0.71
VMP1-215ENST00000592619 TMPRSS4Q9NRS4 437 aa10.62□□□□□ -0.71
VMP1-215ENST00000592619 ADH1CP00326 375 aa10.61□□□□□ -0.71
VMP1-215ENST00000592619 IGFBP4P22692 258 aa10.61□□□□□ -0.71
VMP1-215ENST00000592619 ZNF428Q96B54 188 aa10.61□□□□□ -0.71
VMP1-215ENST00000592619 WNT7AO00755 349 aa10.6□□□□□ -0.71
VMP1-215ENST00000592619 ICMTO60725 284 aa10.6□□□□□ -0.71
VMP1-215ENST00000592619 LILRA1O75019 489 aa10.6□□□□□ -0.71
VMP1-215ENST00000592619 INHAP05111 366 aa10.6□□□□□ -0.71
VMP1-215ENST00000592619 GDF10P55107 478 aa10.6□□□□□ -0.71
VMP1-215ENST00000592619 MYT1Q01538 1121 aa10.6□□□□□ -0.71
VMP1-215ENST00000592619 FKBP5Q13451 457 aaPredicted RBP10.6□□□□□ -0.71
VMP1-215ENST00000592619 CCDC116Q8IYX3 515 aa10.6□□□□□ -0.71
VMP1-215ENST00000592619 ZNF784Q8NCA9 323 aaPredicted RBP10.6□□□□□ -0.71
VMP1-215ENST00000592619 GAS2L2Q8NHY3 880 aa10.6□□□□□ -0.71
VMP1-215ENST00000592619 EMID1Q96A84 441 aaPredicted RBP10.6□□□□□ -0.71
VMP1-215ENST00000592619 CYLDQ9NQC7 956 aa10.6□□□□□ -0.71
VMP1-215ENST00000592619 TLL2Q9Y6L7 1015 aa10.6□□□□□ -0.71
VMP1-215ENST00000592619 FOXO3O43524 673 aa10.59□□□□□ -0.71
VMP1-215ENST00000592619 LGR5O75473 907 aa10.59□□□□□ -0.71
VMP1-215ENST00000592619 SLC4A9Q96Q91 983 aa10.59□□□□□ -0.71
VMP1-215ENST00000592619 BIN2Q9UBW5 565 aaPredicted RBP10.59□□□□□ -0.71
VMP1-215ENST00000592619 ABL1P00519 1130 aa10.58□□□□□ -0.72
VMP1-215ENST00000592619 GNRH1P01148 92 aa10.58□□□□□ -0.72
VMP1-215ENST00000592619 EPHA4P54764 986 aa10.58□□□□□ -0.72
VMP1-215ENST00000592619 MARSP56192 900 aaKnown RBP10.58□□□□□ -0.72
VMP1-215ENST00000592619 LAPTM4AQ15012 233 aa10.58□□□□□ -0.72
VMP1-215ENST00000592619 PPP1R26Q5T8A7 1209 aaPredicted RBP10.58□□□□□ -0.72
VMP1-215ENST00000592619 CYP2U1Q7Z449 544 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms