RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 PPM1GO15355 546 aaPredicted RBP19.12■□□□□ 0.65
APOC1-208ENST00000592535 PROM2Q8N271 834 aa19.12■□□□□ 0.65
APOC1-208ENST00000592535 ZCRB1Q8TBF4 217 aaKnown RBP19.1■□□□□ 0.65
APOC1-208ENST00000592535 POLKQ9UBT6 870 aa19.1■□□□□ 0.65
APOC1-208ENST00000592535 KIF7Q2M1P5 1343 aa19.09■□□□□ 0.65
APOC1-208ENST00000592535 TNNT2P45379 298 aaPredicted RBP19.09■□□□□ 0.65
APOC1-208ENST00000592535 TXNRD1Q16881 649 aa19.09■□□□□ 0.65
APOC1-208ENST00000592535 RAPGEF4Q8WZA2 1011 aa19.09■□□□□ 0.65
APOC1-208ENST00000592535 ANO8Q9HCE9 1232 aaPredicted RBP19.09■□□□□ 0.65
APOC1-208ENST00000592535 WASHC2AQ641Q2 1341 aa19.08■□□□□ 0.65
APOC1-208ENST00000592535 SRCAPQ6ZRS2 3230 aa19.08■□□□□ 0.64
APOC1-208ENST00000592535 NSD2O96028 1365 aa19.07■□□□□ 0.64
APOC1-208ENST00000592535 TATP17735 454 aaPredicted RBP19.07■□□□□ 0.64
APOC1-208ENST00000592535 NCAPD2Q15021 1401 aa19.07■□□□□ 0.64
APOC1-208ENST00000592535 PKD1L3Q7Z443 1732 aa19.05■□□□□ 0.64
APOC1-208ENST00000592535 CASZ1Q86V15 1759 aa19.05■□□□□ 0.64
APOC1-208ENST00000592535 PAPPAQ13219 1627 aa19.03■□□□□ 0.64
APOC1-208ENST00000592535 PRIM1P49642 420 aaKnown RBP19.03■□□□□ 0.64
APOC1-208ENST00000592535 SYTL4Q96C24 671 aaPredicted RBP19.03■□□□□ 0.64
APOC1-208ENST00000592535 EYA1Q99502 592 aa19.03■□□□□ 0.64
APOC1-208ENST00000592535 KNSTRNQ9Y448 316 aa19.03■□□□□ 0.64
APOC1-208ENST00000592535 MORC1Q86VD1 984 aa19.02■□□□□ 0.64
APOC1-208ENST00000592535 PCDH11XQ9BZA7 1347 aa19.01■□□□□ 0.63
APOC1-208ENST00000592535 PCDH11YQ9BZA8 1340 aa19.01■□□□□ 0.63
APOC1-208ENST00000592535 LY75O60449 1722 aa19.01■□□□□ 0.63
APOC1-208ENST00000592535 EIF4A2Q14240 407 aaKnown RBP19.01■□□□□ 0.63
APOC1-208ENST00000592535 STK32BQ9NY57 414 aa19.01■□□□□ 0.63
APOC1-208ENST00000592535 TOGARAM1Q9Y4F4 1720 aa19■□□□□ 0.63
APOC1-208ENST00000592535 CYP27B1O15528 508 aa18.99■□□□□ 0.63
APOC1-208ENST00000592535 SLC15A2Q16348 729 aa18.99■□□□□ 0.63
APOC1-208ENST00000592535 AMER1Q5JTC6 1135 aaPredicted RBP18.99■□□□□ 0.63
APOC1-208ENST00000592535 PDGFDQ9GZP0 370 aaPredicted RBP18.99■□□□□ 0.63
APOC1-208ENST00000592535 ITGB4P16144 1822 aa18.99■□□□□ 0.63
APOC1-208ENST00000592535 LRRC4BQ9NT99 713 aa18.98■□□□□ 0.63
APOC1-208ENST00000592535 SPON1Q9HCB6 807 aa18.96■□□□□ 0.63
APOC1-208ENST00000592535 PER1O15534 1290 aaPredicted RBP18.95■□□□□ 0.62
APOC1-208ENST00000592535 SPG7Q9UQ90 795 aa18.95■□□□□ 0.62
APOC1-208ENST00000592535 IGSF1Q8N6C5 1336 aa18.95■□□□□ 0.62
APOC1-208ENST00000592535 KCNQ4P56696 695 aa18.94■□□□□ 0.62
APOC1-208ENST00000592535 ZNF827Q17R98 1081 aa18.94■□□□□ 0.62
APOC1-208ENST00000592535 SLC27A3Q5K4L6 730 aa18.94■□□□□ 0.62
APOC1-208ENST00000592535 TUBGCP6Q96RT7 1819 aa18.94■□□□□ 0.62
APOC1-208ENST00000592535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.93■□□□□ 0.62
APOC1-208ENST00000592535 QSER1Q2KHR3 1735 aa18.93■□□□□ 0.62
APOC1-208ENST00000592535 ZBTB7AO95365 584 aa18.92■□□□□ 0.62
APOC1-208ENST00000592535 NKX1-1Q15270 411 aaPredicted RBP18.91■□□□□ 0.62
APOC1-208ENST00000592535 CC2D1BQ5T0F9 858 aaKnown RBP18.91■□□□□ 0.62
APOC1-208ENST00000592535 MPRIPQ6WCQ1 1025 aa18.91■□□□□ 0.62
APOC1-208ENST00000592535 AKT1S1Q96B36 256 aa18.91■□□□□ 0.62
APOC1-208ENST00000592535 PPP1R1BQ9UD71 204 aaPredicted RBP18.9■□□□□ 0.62
APOC1-208ENST00000592535 CCNL1Q9UK58 526 aaPredicted RBP18.9■□□□□ 0.62
APOC1-208ENST00000592535 TAF1LQ8IZX4 1826 aa18.89■□□□□ 0.61
APOC1-208ENST00000592535 PHKG2P15735 406 aa18.89■□□□□ 0.61
APOC1-208ENST00000592535 IFNL2Q8IZJ0 200 aa18.89■□□□□ 0.61
APOC1-208ENST00000592535 ATF5Q9Y2D1 282 aaPredicted RBP18.89■□□□□ 0.61
APOC1-208ENST00000592535 PLEKHG2Q9H7P9 1386 aa18.89■□□□□ 0.61
APOC1-208ENST00000592535 C5P01031 1676 aa18.89■□□□□ 0.61
APOC1-208ENST00000592535 AEBP1Q8IUX7 1158 aa18.88■□□□□ 0.61
APOC1-208ENST00000592535 PALLDQ8WX93 1383 aa18.88■□□□□ 0.61
APOC1-208ENST00000592535 IL13P35225 146 aa18.87■□□□□ 0.61
APOC1-208ENST00000592535 MTHFSP49914 203 aa18.87■□□□□ 0.61
APOC1-208ENST00000592535 NPC1L1Q9UHC9 1359 aa18.86■□□□□ 0.61
APOC1-208ENST00000592535 PTGER2P43116 358 aa18.86■□□□□ 0.61
APOC1-208ENST00000592535 CNGB1Q14028 1251 aaPredicted RBP18.86■□□□□ 0.61
APOC1-208ENST00000592535 PIGBQ92521 554 aa18.86■□□□□ 0.61
APOC1-208ENST00000592535 MTFR1LQ9H019 292 aa18.86■□□□□ 0.61
APOC1-208ENST00000592535 PNPLA7Q6ZV29 1317 aa18.85■□□□□ 0.61
APOC1-208ENST00000592535 SULT6B1Q6IMI4 303 aa18.85■□□□□ 0.61
APOC1-208ENST00000592535 PLEKHO1Q53GL0 409 aaPredicted RBP18.84■□□□□ 0.61
APOC1-208ENST00000592535 TFCP2L1Q9NZI6 479 aa18.84■□□□□ 0.61
APOC1-208ENST00000592535 KDRP35968 1356 aa18.83■□□□□ 0.61
APOC1-208ENST00000592535 SMARCC1Q92922 1105 aaPredicted RBP18.83■□□□□ 0.6
APOC1-208ENST00000592535 TMOD3Q9NYL9 352 aa18.83■□□□□ 0.6
APOC1-208ENST00000592535 AMOTQ4VCS5 1084 aa18.82■□□□□ 0.6
APOC1-208ENST00000592535 ZNF530Q6P9A1 599 aaPredicted RBP18.82■□□□□ 0.6
APOC1-208ENST00000592535 SGIP1Q9BQI5 828 aa18.82■□□□□ 0.6
APOC1-208ENST00000592535 COL24A1Q17RW2 1714 aa18.82■□□□□ 0.6
APOC1-208ENST00000592535 C4BP0C0L5 1744 aa18.81■□□□□ 0.6
APOC1-208ENST00000592535 KDM6AO15550 1401 aaPredicted RBP18.81■□□□□ 0.6
APOC1-208ENST00000592535 ASAP1Q9ULH1 1129 aa18.8■□□□□ 0.6
APOC1-208ENST00000592535 COL3A1P02461 1466 aaPredicted RBP18.79■□□□□ 0.6
APOC1-208ENST00000592535 HSP90AB1P08238 724 aaKnown RBP18.79■□□□□ 0.6
APOC1-208ENST00000592535 SLC16A10Q8TF71 515 aa18.79■□□□□ 0.6
APOC1-208ENST00000592535 DCAF5Q96JK2 942 aa18.79■□□□□ 0.6
APOC1-208ENST00000592535 VIRMAQ69YN4 1812 aaKnown RBP18.79■□□□□ 0.6
APOC1-208ENST00000592535 SCN11AQ9UI33 1791 aa18.78■□□□□ 0.6
APOC1-208ENST00000592535 UBR3Q6ZT12 1888 aa18.78■□□□□ 0.6
APOC1-208ENST00000592535 DIAPH1O60610 1272 aaKnown RBP18.78■□□□□ 0.6
APOC1-208ENST00000592535 HMOX1P09601 288 aa18.78■□□□□ 0.6
APOC1-208ENST00000592535 ATG3Q9NT62 314 aa18.78■□□□□ 0.6
APOC1-208ENST00000592535 LOC102724428A0A0B4J2F2 783 aa18.77■□□□□ 0.6
APOC1-208ENST00000592535 ERVV-2B6SEH9 535 aa18.77■□□□□ 0.6
APOC1-208ENST00000592535 SIK1P57059 783 aa18.77■□□□□ 0.6
APOC1-208ENST00000592535 C1orf141Q5JVX7 400 aa18.77■□□□□ 0.6
APOC1-208ENST00000592535 COL23A1Q86Y22 540 aaPredicted RBP18.77■□□□□ 0.6
APOC1-208ENST00000592535 FHDC1Q9C0D6 1143 aaPredicted RBP18.76■□□□□ 0.59
APOC1-208ENST00000592535 MSH5O43196 834 aa18.75■□□□□ 0.59
APOC1-208ENST00000592535 ARXQ96QS3 562 aa18.75■□□□□ 0.59
APOC1-208ENST00000592535 HMGB2P26583 209 aaKnown RBP18.74■□□□□ 0.59
APOC1-208ENST00000592535 CABP4P57796 275 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 1040.6 ms