RNA–Protein interactions for RNA: ENST00000592488.2

AP3D1-212, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-212ENST00000592488 ZCRB1Q8TBF4 217 aaKnown RBP23.16■■□□□ 1.3
AP3D1-212ENST00000592488 RAPGEF4Q8WZA2 1011 aa23.16■■□□□ 1.3
AP3D1-212ENST00000592488 WASHC2AQ641Q2 1341 aa23.15■■□□□ 1.3
AP3D1-212ENST00000592488 POLKQ9UBT6 870 aa23.15■■□□□ 1.3
AP3D1-212ENST00000592488 SHANK3Q9BYB0 1731 aa23.15■■□□□ 1.3
AP3D1-212ENST00000592488 TNNT2P45379 298 aaPredicted RBP23.14■■□□□ 1.29
AP3D1-212ENST00000592488 KAT6BQ8WYB5 2073 aa23.13■■□□□ 1.29
AP3D1-212ENST00000592488 BTAF1O14981 1849 aa23.12■■□□□ 1.29
AP3D1-212ENST00000592488 TATP17735 454 aaPredicted RBP23.12■■□□□ 1.29
AP3D1-212ENST00000592488 PROM2Q8N271 834 aa23.12■■□□□ 1.29
AP3D1-212ENST00000592488 KNSTRNQ9Y448 316 aa23.12■■□□□ 1.29
AP3D1-212ENST00000592488 NCAPD2Q15021 1401 aa23.11■■□□□ 1.29
AP3D1-212ENST00000592488 TXNRD1Q16881 649 aa23.11■■□□□ 1.29
AP3D1-212ENST00000592488 DOT1LQ8TEK3 1739 aa23.09■■□□□ 1.29
AP3D1-212ENST00000592488 MORC1Q86VD1 984 aa23.08■■□□□ 1.29
AP3D1-212ENST00000592488 ANO8Q9HCE9 1232 aaPredicted RBP23.08■■□□□ 1.29
AP3D1-212ENST00000592488 PCDH11XQ9BZA7 1347 aa23.08■■□□□ 1.28
AP3D1-212ENST00000592488 PCDH11YQ9BZA8 1340 aa23.08■■□□□ 1.28
AP3D1-212ENST00000592488 SYTL4Q96C24 671 aaPredicted RBP23.06■■□□□ 1.28
AP3D1-212ENST00000592488 EYA1Q99502 592 aa23.05■■□□□ 1.28
AP3D1-212ENST00000592488 PKD1L3Q7Z443 1732 aa23.05■■□□□ 1.28
AP3D1-212ENST00000592488 PRIM1P49642 420 aaKnown RBP23.04■■□□□ 1.28
AP3D1-212ENST00000592488 EIF4A2Q14240 407 aaKnown RBP23.04■■□□□ 1.28
AP3D1-212ENST00000592488 AMER1Q5JTC6 1135 aaPredicted RBP23.03■■□□□ 1.28
AP3D1-212ENST00000592488 STK32BQ9NY57 414 aa23.03■■□□□ 1.28
AP3D1-212ENST00000592488 PAPPAQ13219 1627 aa23■■□□□ 1.27
AP3D1-212ENST00000592488 CYP27B1O15528 508 aa23■■□□□ 1.27
AP3D1-212ENST00000592488 SLC15A2Q16348 729 aa23■■□□□ 1.27
AP3D1-212ENST00000592488 SPG7Q9UQ90 795 aa23■■□□□ 1.27
AP3D1-212ENST00000592488 CASZ1Q86V15 1759 aa22.99■■□□□ 1.27
AP3D1-212ENST00000592488 PER1O15534 1290 aaPredicted RBP22.98■■□□□ 1.27
AP3D1-212ENST00000592488 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.98■■□□□ 1.272e-6■■■□□ 16.4
AP3D1-212ENST00000592488 IGSF1Q8N6C5 1336 aa22.98■■□□□ 1.27
AP3D1-212ENST00000592488 PLEKHG2Q9H7P9 1386 aa22.98■■□□□ 1.27
AP3D1-212ENST00000592488 SLC27A3Q5K4L6 730 aa22.97■■□□□ 1.27
AP3D1-212ENST00000592488 SPON1Q9HCB6 807 aa22.97■■□□□ 1.27
AP3D1-212ENST00000592488 LRRC4BQ9NT99 713 aa22.97■■□□□ 1.27
AP3D1-212ENST00000592488 LY75O60449 1722 aa22.96■■□□□ 1.27
AP3D1-212ENST00000592488 TOGARAM1Q9Y4F4 1720 aa22.95■■□□□ 1.26
AP3D1-212ENST00000592488 NKX1-1Q15270 411 aaPredicted RBP22.93■■□□□ 1.26
AP3D1-212ENST00000592488 CC2D1BQ5T0F9 858 aaKnown RBP22.93■■□□□ 1.26
AP3D1-212ENST00000592488 PDGFDQ9GZP0 370 aaPredicted RBP22.93■■□□□ 1.26
AP3D1-212ENST00000592488 NPC1L1Q9UHC9 1359 aa22.92■■□□□ 1.26
AP3D1-212ENST00000592488 ZNF827Q17R98 1081 aa22.92■■□□□ 1.26
AP3D1-212ENST00000592488 MPRIPQ6WCQ1 1025 aa22.91■■□□□ 1.26
AP3D1-212ENST00000592488 ITGB4P16144 1822 aa22.9■■□□□ 1.26
AP3D1-212ENST00000592488 PHKG2P15735 406 aa22.9■■□□□ 1.26
AP3D1-212ENST00000592488 IFNL2Q8IZJ0 200 aa22.9■■□□□ 1.26
AP3D1-212ENST00000592488 CCNL1Q9UK58 526 aaPredicted RBP22.9■■□□□ 1.26
AP3D1-212ENST00000592488 ZBTB7AO95365 584 aa22.89■■□□□ 1.25
AP3D1-212ENST00000592488 AKT1S1Q96B36 256 aa22.89■■□□□ 1.25
AP3D1-212ENST00000592488 PPP1R1BQ9UD71 204 aaPredicted RBP22.89■■□□□ 1.25
AP3D1-212ENST00000592488 IL13P35225 146 aa22.88■■□□□ 1.25
AP3D1-212ENST00000592488 MTHFSP49914 203 aa22.88■■□□□ 1.25
AP3D1-212ENST00000592488 KCNQ4P56696 695 aa22.88■■□□□ 1.25
AP3D1-212ENST00000592488 PALLDQ8WX93 1383 aa22.88■■□□□ 1.25
AP3D1-212ENST00000592488 AEBP1Q8IUX7 1158 aa22.87■■□□□ 1.25
AP3D1-212ENST00000592488 QSER1Q2KHR3 1735 aa22.86■■□□□ 1.25
AP3D1-212ENST00000592488 PLEKHO1Q53GL0 409 aaPredicted RBP22.86■■□□□ 1.25
AP3D1-212ENST00000592488 KDRP35968 1356 aa22.86■■□□□ 1.25
AP3D1-212ENST00000592488 AMOTQ4VCS5 1084 aa22.85■■□□□ 1.25
AP3D1-212ENST00000592488 SULT6B1Q6IMI4 303 aa22.85■■□□□ 1.25
AP3D1-212ENST00000592488 PIGBQ92521 554 aa22.85■■□□□ 1.25
AP3D1-212ENST00000592488 SMARCC1Q92922 1105 aaPredicted RBP22.85■■□□□ 1.25
AP3D1-212ENST00000592488 MTFR1LQ9H019 292 aa22.85■■□□□ 1.25
AP3D1-212ENST00000592488 TMOD3Q9NYL9 352 aa22.84■■□□□ 1.25
AP3D1-212ENST00000592488 TFCP2L1Q9NZI6 479 aa22.84■■□□□ 1.25
AP3D1-212ENST00000592488 ATF5Q9Y2D1 282 aaPredicted RBP22.84■■□□□ 1.25
AP3D1-212ENST00000592488 CNGB1Q14028 1251 aaPredicted RBP22.83■■□□□ 1.25
AP3D1-212ENST00000592488 ZNF530Q6P9A1 599 aaPredicted RBP22.83■■□□□ 1.25
AP3D1-212ENST00000592488 C5P01031 1676 aa22.83■■□□□ 1.24
AP3D1-212ENST00000592488 TUBGCP6Q96RT7 1819 aa22.82■■□□□ 1.24
AP3D1-212ENST00000592488 HSP90AB1P08238 724 aaKnown RBP22.82■■□□□ 1.24
AP3D1-212ENST00000592488 HMGB2P26583 209 aaKnown RBP22.82■■□□□ 1.24
AP3D1-212ENST00000592488 PTGER2P43116 358 aa22.82■■□□□ 1.24
AP3D1-212ENST00000592488 PNPLA7Q6ZV29 1317 aa22.82■■□□□ 1.24
AP3D1-212ENST00000592488 DIAPH1O60610 1272 aaKnown RBP22.8■■□□□ 1.24
AP3D1-212ENST00000592488 DCAF5Q96JK2 942 aa22.8■■□□□ 1.24
AP3D1-212ENST00000592488 TAF1LQ8IZX4 1826 aa22.79■■□□□ 1.24
AP3D1-212ENST00000592488 ERVV-2B6SEH9 535 aa22.78■■□□□ 1.24
AP3D1-212ENST00000592488 C1orf141Q5JVX7 400 aa22.78■■□□□ 1.24
AP3D1-212ENST00000592488 SLC16A10Q8TF71 515 aa22.78■■□□□ 1.24
AP3D1-212ENST00000592488 COL3A1P02461 1466 aaPredicted RBP22.78■■□□□ 1.24
AP3D1-212ENST00000592488 KDM6AO15550 1401 aaPredicted RBP22.77■■□□□ 1.24
AP3D1-212ENST00000592488 SGIP1Q9BQI5 828 aa22.77■■□□□ 1.24
AP3D1-212ENST00000592488 ASAP1Q9ULH1 1129 aa22.76■■□□□ 1.23
AP3D1-212ENST00000592488 LOC102724428A0A0B4J2F2 783 aa22.75■■□□□ 1.23
AP3D1-212ENST00000592488 HMOX1P09601 288 aa22.75■■□□□ 1.23
AP3D1-212ENST00000592488 SIK1P57059 783 aa22.75■■□□□ 1.23
AP3D1-212ENST00000592488 C4BP0C0L5 1744 aa22.74■■□□□ 1.23
AP3D1-212ENST00000592488 ATG3Q9NT62 314 aa22.73■■□□□ 1.23
AP3D1-212ENST00000592488 CABP4P57796 275 aa22.72■■□□□ 1.23
AP3D1-212ENST00000592488 COL24A1Q17RW2 1714 aa22.71■■□□□ 1.23
AP3D1-212ENST00000592488 MSH5O43196 834 aa22.71■■□□□ 1.23
AP3D1-212ENST00000592488 AK7Q96M32 723 aa22.71■■□□□ 1.23
AP3D1-212ENST00000592488 ARXQ96QS3 562 aa22.71■■□□□ 1.23
AP3D1-212ENST00000592488 POLD1P28340 1107 aa22.7■■□□□ 1.22
AP3D1-212ENST00000592488 AKAP4Q5JQC9 854 aa22.7■■□□□ 1.22
AP3D1-212ENST00000592488 COL23A1Q86Y22 540 aaPredicted RBP22.7■■□□□ 1.22
AP3D1-212ENST00000592488 FLAD1Q8NFF5 587 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms