RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 ATF5Q9Y2D1 282 aaPredicted RBP25.49■■□□□ 1.67
CIRBP-237ENST00000592234 USHBP1Q8N6Y0 703 aa25.48■■□□□ 1.67
CIRBP-237ENST00000592234 CARD14Q9BXL6 1004 aa25.48■■□□□ 1.67
CIRBP-237ENST00000592234 FLT4P35916 1363 aa25.47■■□□□ 1.67
CIRBP-237ENST00000592234 INSRP06213 1382 aa25.46■■□□□ 1.67
CIRBP-237ENST00000592234 HSP90AB2PQ58FF8 381 aa25.46■■□□□ 1.67
CIRBP-237ENST00000592234 RAPGEF4Q8WZA2 1011 aa25.46■■□□□ 1.67
CIRBP-237ENST00000592234 KIF24Q5T7B8 1368 aa25.45■■□□□ 1.67
CIRBP-237ENST00000592234 CGNL1Q0VF96 1302 aa25.45■■□□□ 1.66
CIRBP-237ENST00000592234 DCAF8L1A6NGE4 600 aa25.45■■□□□ 1.66
CIRBP-237ENST00000592234 PTGER2P43116 358 aa25.45■■□□□ 1.66
CIRBP-237ENST00000592234 PRIM1P49642 420 aaKnown RBP25.45■■□□□ 1.66
CIRBP-237ENST00000592234 MTFR1LQ9H019 292 aa25.45■■□□□ 1.66
CIRBP-237ENST00000592234 LRRC4BQ9NT99 713 aa25.45■■□□□ 1.66
CIRBP-237ENST00000592234 LY75O60449 1722 aa25.43■■□□□ 1.66
CIRBP-237ENST00000592234 MAP2P11137 1827 aaKnown RBP25.43■■□□□ 1.66
CIRBP-237ENST00000592234 TATP17735 454 aaPredicted RBP25.43■■□□□ 1.66
CIRBP-237ENST00000592234 ZNF827Q17R98 1081 aa25.43■■□□□ 1.66
CIRBP-237ENST00000592234 SLC27A3Q5K4L6 730 aa25.43■■□□□ 1.66
CIRBP-237ENST00000592234 QSER1Q2KHR3 1735 aa25.42■■□□□ 1.66
CIRBP-237ENST00000592234 POLR3GLQ9BT43 218 aa25.41■■□□□ 1.66
CIRBP-237ENST00000592234 EMILIN1Q9Y6C2 1016 aa25.41■■□□□ 1.66
CIRBP-237ENST00000592234 NSD2O96028 1365 aa25.4■■□□□ 1.66
CIRBP-237ENST00000592234 ANKRD26Q9UPS8 1709 aa25.39■■□□□ 1.65
CIRBP-237ENST00000592234 TUBGCP6Q96RT7 1819 aa25.38■■□□□ 1.65
CIRBP-237ENST00000592234 AKT1S1Q96B36 256 aa25.38■■□□□ 1.65
CIRBP-237ENST00000592234 PPM1GO15355 546 aaPredicted RBP25.37■■□□□ 1.65
CIRBP-237ENST00000592234 PCDH11XQ9BZA7 1347 aa25.37■■□□□ 1.65
CIRBP-237ENST00000592234 PCDH11YQ9BZA8 1340 aa25.37■■□□□ 1.65
CIRBP-237ENST00000592234 YY1P25490 414 aa25.36■■□□□ 1.65
CIRBP-237ENST00000592234 KCNQ4P56696 695 aa25.36■■□□□ 1.65
CIRBP-237ENST00000592234 SGIP1Q9BQI5 828 aa25.36■■□□□ 1.65
CIRBP-237ENST00000592234 EIF4G2P78344 907 aaKnown RBP eCLIP25.35■■□□□ 1.65
CIRBP-237ENST00000592234 FHDC1Q9C0D6 1143 aaPredicted RBP25.35■■□□□ 1.65
CIRBP-237ENST00000592234 PKD1L3Q7Z443 1732 aa25.33■■□□□ 1.65
CIRBP-237ENST00000592234 SYT17Q9BSW7 474 aa25.33■■□□□ 1.65
CIRBP-237ENST00000592234 TFCP2L1Q9NZI6 479 aa25.33■■□□□ 1.65
CIRBP-237ENST00000592234 CCNL1Q9UK58 526 aaPredicted RBP25.33■■□□□ 1.65
CIRBP-237ENST00000592234 ARXQ96QS3 562 aa25.32■■□□□ 1.64
CIRBP-237ENST00000592234 ITGB4P16144 1822 aa25.32■■□□□ 1.64
CIRBP-237ENST00000592234 HSPA5P11021 654 aaKnown RBP25.31■■□□□ 1.64
CIRBP-237ENST00000592234 SLC16A10Q8TF71 515 aa25.31■■□□□ 1.64
CIRBP-237ENST00000592234 WASHC2AQ641Q2 1341 aa25.31■■□□□ 1.64
CIRBP-237ENST00000592234 PNPLA7Q6ZV29 1317 aa25.31■■□□□ 1.64
CIRBP-237ENST00000592234 CYP27B1O15528 508 aa25.29■■□□□ 1.64
CIRBP-237ENST00000592234 TOGARAM1Q9Y4F4 1720 aa25.29■■□□□ 1.64
CIRBP-237ENST00000592234 NCAPD2Q15021 1401 aa25.29■■□□□ 1.64
CIRBP-237ENST00000592234 POLKQ9UBT6 870 aa25.28■■□□□ 1.64
CIRBP-237ENST00000592234 COL24A1Q17RW2 1714 aa25.28■■□□□ 1.64
CIRBP-237ENST00000592234 C5P01031 1676 aa25.27■■□□□ 1.64
CIRBP-237ENST00000592234 MPRIPQ6WCQ1 1025 aa25.27■■□□□ 1.64
CIRBP-237ENST00000592234 TAF1LQ8IZX4 1826 aa25.26■■□□□ 1.63
CIRBP-237ENST00000592234 POLD1P28340 1107 aa25.26■■□□□ 1.63
CIRBP-237ENST00000592234 TNNT2P45379 298 aaPredicted RBP25.26■■□□□ 1.63
CIRBP-237ENST00000592234 EYA1Q99502 592 aa25.26■■□□□ 1.63
CIRBP-237ENST00000592234 SPG7Q9UQ90 795 aa25.25■■□□□ 1.63
CIRBP-237ENST00000592234 PANK3Q9H999 370 aa25.24■■□□□ 1.63
CIRBP-237ENST00000592234 PALLDQ8WX93 1383 aa25.23■■□□□ 1.63
CIRBP-237ENST00000592234 MAP3K5Q99683 1374 aa25.23■■□□□ 1.63
CIRBP-237ENST00000592234 CHD4Q14839 1912 aa25.22■■□□□ 1.63
CIRBP-237ENST00000592234 MSH5O43196 834 aa25.21■■□□□ 1.63
CIRBP-237ENST00000592234 HMGB2P26583 209 aaKnown RBP25.21■■□□□ 1.63
CIRBP-237ENST00000592234 KLHL34Q8N239 644 aa25.21■■□□□ 1.63
CIRBP-237ENST00000592234 EIF4A2Q14240 407 aaKnown RBP25.2■■□□□ 1.62
CIRBP-237ENST00000592234 NKX1-1Q15270 411 aaPredicted RBP25.2■■□□□ 1.62
CIRBP-237ENST00000592234 SMARCC1Q92922 1105 aaPredicted RBP25.2■■□□□ 1.62
CIRBP-237ENST00000592234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.19■■□□□ 1.624e-13■□□□□ 8.8
CIRBP-237ENST00000592234 COL23A1Q86Y22 540 aaPredicted RBP25.18■■□□□ 1.62
CIRBP-237ENST00000592234 UTRNP46939 3433 aa25.18■■□□□ 1.62
CIRBP-237ENST00000592234 PIGBQ92521 554 aa25.17■■□□□ 1.62
CIRBP-237ENST00000592234 C4BP0C0L5 1744 aa25.16■■□□□ 1.62
CIRBP-237ENST00000592234 IFNL2Q8IZJ0 200 aa25.16■■□□□ 1.62
CIRBP-237ENST00000592234 PHKG2P15735 406 aa25.14■■□□□ 1.62
CIRBP-237ENST00000592234 TMOD3Q9NYL9 352 aa25.14■■□□□ 1.62
CIRBP-237ENST00000592234 MORC1Q86VD1 984 aa25.13■■□□□ 1.61
CIRBP-237ENST00000592234 FLAD1Q8NFF5 587 aa25.13■■□□□ 1.61
CIRBP-237ENST00000592234 IGSF1Q8N6C5 1336 aa25.12■■□□□ 1.61
CIRBP-237ENST00000592234 GPR162Q16538 588 aa25.12■■□□□ 1.61
CIRBP-237ENST00000592234 AK7Q96M32 723 aa25.12■■□□□ 1.61
CIRBP-237ENST00000592234 UBR3Q6ZT12 1888 aa25.12■■□□□ 1.61
CIRBP-237ENST00000592234 PLEKHG2Q9H7P9 1386 aa25.11■■□□□ 1.61
CIRBP-237ENST00000592234 MSL1Q68DK7 614 aa25.11■■□□□ 1.61
CIRBP-237ENST00000592234 KNSTRNQ9Y448 316 aa25.11■■□□□ 1.61
CIRBP-237ENST00000592234 LOC102724428A0A0B4J2F2 783 aa25.09■■□□□ 1.61
CIRBP-237ENST00000592234 SIK1P57059 783 aa25.09■■□□□ 1.61
CIRBP-237ENST00000592234 PELP1Q8IZL8 1130 aaKnown RBP25.08■■□□□ 1.61
CIRBP-237ENST00000592234 NLGN2Q8NFZ4 835 aa25.07■■□□□ 1.6
CIRBP-237ENST00000592234 ASAP1Q9ULH1 1129 aa25.07■■□□□ 1.6
CIRBP-237ENST00000592234 PLEKHO1Q53GL0 409 aaPredicted RBP25.06■■□□□ 1.6
CIRBP-237ENST00000592234 PHF14O94880 888 aa25.05■■□□□ 1.6
CIRBP-237ENST00000592234 HSP90AB1P08238 724 aaKnown RBP25.04■■□□□ 1.6
CIRBP-237ENST00000592234 ATP6V1AP38606 617 aa25.04■■□□□ 1.6
CIRBP-237ENST00000592234 ZNF784Q8NCA9 323 aaPredicted RBP25.04■■□□□ 1.6
CIRBP-237ENST00000592234 LINC00116Q8NCU8 138 aa25.04■■□□□ 1.6
CIRBP-237ENST00000592234 AMIGO3Q86WK7 504 aa25.03■■□□□ 1.6
CIRBP-237ENST00000592234 ATG3Q9NT62 314 aa25.03■■□□□ 1.6
CIRBP-237ENST00000592234 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.02■■□□□ 1.6
CIRBP-237ENST00000592234 ERVV-2B6SEH9 535 aa25.02■■□□□ 1.6
CIRBP-237ENST00000592234 AMOTQ4VCS5 1084 aa25.02■■□□□ 1.6
CIRBP-237ENST00000592234 ZNF530Q6P9A1 599 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms