RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 MEGF6O75095 1541 aa13.09□□□□□ -0.31
TPM4-215ENST00000592138 EXOC5O00471 708 aa13.09□□□□□ -0.31
TPM4-215ENST00000592138 PDE3BQ13370 1112 aa13.09□□□□□ -0.31
TPM4-215ENST00000592138 RAPGEF4Q8WZA2 1011 aa13.09□□□□□ -0.31
TPM4-215ENST00000592138 CCDC125Q86Z20 511 aa13.08□□□□□ -0.32
TPM4-215ENST00000592138 TATP17735 454 aaPredicted RBP13.07□□□□□ -0.32
TPM4-215ENST00000592138 USHBP1Q8N6Y0 703 aa13.07□□□□□ -0.32
TPM4-215ENST00000592138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.07□□□□□ -0.323e-8■■□□□ 13.7
TPM4-215ENST00000592138 RGPD2P0DJD1 1756 aa13.07□□□□□ -0.32
TPM4-215ENST00000592138 FAM196AQ6ZSG2 479 aa13.06□□□□□ -0.32
TPM4-215ENST00000592138 ZCRB1Q8TBF4 217 aaKnown RBP13.05□□□□□ -0.32
TPM4-215ENST00000592138 NUDCQ9Y266 331 aa13.05□□□□□ -0.32
TPM4-215ENST00000592138 SULT6B1Q6IMI4 303 aa13.04□□□□□ -0.32
TPM4-215ENST00000592138 MARCH10Q8NA82 808 aaPredicted RBP13.04□□□□□ -0.32
TPM4-215ENST00000592138 PCDH11XQ9BZA7 1347 aa13.04□□□□□ -0.32
TPM4-215ENST00000592138 PCDH11YQ9BZA8 1340 aa13.04□□□□□ -0.32
TPM4-215ENST00000592138 PKD1L3Q7Z443 1732 aa13.04□□□□□ -0.32
TPM4-215ENST00000592138 ANP32CO43423 234 aa13.03□□□□□ -0.32
TPM4-215ENST00000592138 AMOTQ4VCS5 1084 aa13.03□□□□□ -0.32
TPM4-215ENST00000592138 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
TPM4-215ENST00000592138 AEBP1Q8IUX7 1158 aa13.02□□□□□ -0.33
TPM4-215ENST00000592138 SHANK3Q9BYB0 1731 aa13.02□□□□□ -0.33
TPM4-215ENST00000592138 U2SURPO15042 1029 aaKnown RBP13.01□□□□□ -0.33
TPM4-215ENST00000592138 FCHSD2O94868 740 aa13□□□□□ -0.33
TPM4-215ENST00000592138 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
TPM4-215ENST00000592138 PLEKHO1Q53GL0 409 aaPredicted RBP13□□□□□ -0.33
TPM4-215ENST00000592138 FAM182BQ5T319 152 aa13□□□□□ -0.33
TPM4-215ENST00000592138 UTRNP46939 3433 aa12.99□□□□□ -0.33
TPM4-215ENST00000592138 CYP27B1O15528 508 aa12.99□□□□□ -0.33
TPM4-215ENST00000592138 HMOX1P09601 288 aa12.99□□□□□ -0.33
TPM4-215ENST00000592138 IFNL2Q8IZJ0 200 aa12.99□□□□□ -0.33
TPM4-215ENST00000592138 DDX54Q8TDD1 881 aaKnown RBP12.99□□□□□ -0.33
TPM4-215ENST00000592138 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
TPM4-215ENST00000592138 U2AF1L5P0DN76 240 aaPredicted RBP12.98□□□□□ -0.33
TPM4-215ENST00000592138 PHKG2P15735 406 aa12.98□□□□□ -0.33
TPM4-215ENST00000592138 U2AF1Q01081 240 aaKnown RBP eCLIP12.98□□□□□ -0.33
TPM4-215ENST00000592138 DEFB132Q7Z7B7 95 aa12.98□□□□□ -0.33
TPM4-215ENST00000592138 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
TPM4-215ENST00000592138 BCL11BQ9C0K0 894 aaPredicted RBP12.97□□□□□ -0.33
TPM4-215ENST00000592138 PNNQ9H307 717 aaKnown RBP12.97□□□□□ -0.33
TPM4-215ENST00000592138 NHSQ6T4R5 1651 aa12.96□□□□□ -0.33
TPM4-215ENST00000592138 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.33
TPM4-215ENST00000592138 TRIM37O94972 964 aa12.95□□□□□ -0.34
TPM4-215ENST00000592138 PRKAR2BP31323 418 aa12.95□□□□□ -0.34
TPM4-215ENST00000592138 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
TPM4-215ENST00000592138 C1orf141Q5JVX7 400 aa12.95□□□□□ -0.34
TPM4-215ENST00000592138 ZNF530Q6P9A1 599 aaPredicted RBP12.95□□□□□ -0.34
TPM4-215ENST00000592138 GAS2L2Q8NHY3 880 aa12.95□□□□□ -0.34
TPM4-215ENST00000592138 DCAF5Q96JK2 942 aa12.95□□□□□ -0.34
TPM4-215ENST00000592138 TNS1Q9HBL0 1735 aaKnown RBP12.95□□□□□ -0.34
TPM4-215ENST00000592138 SBF2Q86WG5 1849 aa12.93□□□□□ -0.34
TPM4-215ENST00000592138 PLSCR1O15162 318 aa12.93□□□□□ -0.34
TPM4-215ENST00000592138 BAG6P46379 1132 aa12.93□□□□□ -0.34
TPM4-215ENST00000592138 WDR43Q15061 677 aaKnown RBP eCLIP12.93□□□□□ -0.341e-6■□□□□ 11.1
TPM4-215ENST00000592138 MTHFSDQ2M296 383 aaKnown RBP12.93□□□□□ -0.34
TPM4-215ENST00000592138 PLEKHF1Q96S99 279 aa12.93□□□□□ -0.34
TPM4-215ENST00000592138 RGPD3A6NKT7 1758 aaPredicted RBP12.92□□□□□ -0.34
TPM4-215ENST00000592138 RGPD4Q7Z3J3 1758 aa12.92□□□□□ -0.34
TPM4-215ENST00000592138 ERVV-2B6SEH9 535 aa12.92□□□□□ -0.34
TPM4-215ENST00000592138 KDM6AO15550 1401 aaPredicted RBP12.92□□□□□ -0.34
TPM4-215ENST00000592138 NEFMP07197 916 aa12.92□□□□□ -0.34
TPM4-215ENST00000592138 DOT1LQ8TEK3 1739 aa12.92□□□□□ -0.34
TPM4-215ENST00000592138 KCNQ2O43526 872 aa12.91□□□□□ -0.34
TPM4-215ENST00000592138 APBA3O96018 575 aa12.91□□□□□ -0.34
TPM4-215ENST00000592138 PRIM1P49642 420 aaKnown RBP12.91□□□□□ -0.34
TPM4-215ENST00000592138 ACSBG1Q96GR2 724 aa12.91□□□□□ -0.34
TPM4-215ENST00000592138 PHACTR3Q96KR7 559 aa12.91□□□□□ -0.34
TPM4-215ENST00000592138 ADAMTS7Q9UKP4 1686 aa12.91□□□□□ -0.34
TPM4-215ENST00000592138 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
TPM4-215ENST00000592138 MRC1P22897 1456 aa12.91□□□□□ -0.34
TPM4-215ENST00000592138 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
TPM4-215ENST00000592138 CACNB1Q02641 598 aaPredicted RBP12.9□□□□□ -0.34
TPM4-215ENST00000592138 MAPK8IP3Q9UPT6 1336 aa12.89□□□□□ -0.35
TPM4-215ENST00000592138 PSDA5PKW4 1024 aaPredicted RBP12.89□□□□□ -0.35
TPM4-215ENST00000592138 GNAT3A8MTJ3 354 aa12.89□□□□□ -0.35
TPM4-215ENST00000592138 HTATSF1O43719 755 aaKnown RBP12.89□□□□□ -0.35
TPM4-215ENST00000592138 DIEXFQ68CQ4 756 aaKnown RBP12.89□□□□□ -0.35
TPM4-215ENST00000592138 PTF1AQ7RTS3 328 aa12.89□□□□□ -0.35
TPM4-215ENST00000592138 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
TPM4-215ENST00000592138 CAMKK2Q96RR4 588 aa12.89□□□□□ -0.35
TPM4-215ENST00000592138 MRS2Q9HD23 443 aa12.89□□□□□ -0.35
TPM4-215ENST00000592138 ADAMTS8Q9UP79 889 aa12.89□□□□□ -0.35
TPM4-215ENST00000592138 CCDC184Q52MB2 194 aa12.88□□□□□ -0.35
TPM4-215ENST00000592138 SYTL4Q96C24 671 aaPredicted RBP12.88□□□□□ -0.35
TPM4-215ENST00000592138 RUNDC1Q96C34 613 aa12.88□□□□□ -0.35
TPM4-215ENST00000592138 TMOD3Q9NYL9 352 aa12.88□□□□□ -0.35
TPM4-215ENST00000592138 CEMIPQ8WUJ3 1361 aa12.88□□□□□ -0.35
TPM4-215ENST00000592138 CCER2I3L3R5 266 aa12.87□□□□□ -0.35
TPM4-215ENST00000592138 RNMTO43148 476 aaKnown RBP12.87□□□□□ -0.35
TPM4-215ENST00000592138 EN1Q05925 392 aaPredicted RBP12.87□□□□□ -0.35
TPM4-215ENST00000592138 NFE2L2Q16236 605 aa12.87□□□□□ -0.35
TPM4-215ENST00000592138 MPRIPQ6WCQ1 1025 aa12.87□□□□□ -0.35
TPM4-215ENST00000592138 BTAF1O14981 1849 aa12.86□□□□□ -0.35
TPM4-215ENST00000592138 HMGB2P26583 209 aaKnown RBP12.86□□□□□ -0.35
TPM4-215ENST00000592138 PIGBQ92521 554 aa12.86□□□□□ -0.35
TPM4-215ENST00000592138 SMARCC1Q92922 1105 aaPredicted RBP12.86□□□□□ -0.35
TPM4-215ENST00000592138 SLC52A2Q9HAB3 445 aa12.86□□□□□ -0.35
TPM4-215ENST00000592138 RREB1Q92766 1687 aa12.86□□□□□ -0.35
TPM4-215ENST00000592138 SCN11AQ9UI33 1791 aa12.85□□□□□ -0.35
TPM4-215ENST00000592138 CABP4P57796 275 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms