RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 ANKRD36BQ8N2N9 1353 aa21.37■■□□□ 1.01
CXXC1-217ENST00000592078 CGNL1Q0VF96 1302 aa21.37■■□□□ 1.01
CXXC1-217ENST00000592078 ZNF827Q17R98 1081 aa21.37■■□□□ 1.01
CXXC1-217ENST00000592078 DDX54Q8TDD1 881 aaKnown RBP21.37■■□□□ 1.01
CXXC1-217ENST00000592078 GRIN3BO60391 1043 aa21.36■■□□□ 1.01
CXXC1-217ENST00000592078 COG3Q96JB2 828 aa21.36■■□□□ 1.01
CXXC1-217ENST00000592078 CDCA8Q53HL2 280 aa21.35■■□□□ 1.01
CXXC1-217ENST00000592078 SENP3-EIF4A1A0A087X0R7 540 aa21.34■■□□□ 1.01
CXXC1-217ENST00000592078 A0A1W2PP64 1363 aa21.34■■□□□ 1.01
CXXC1-217ENST00000592078 KAT6BQ8WYB5 2073 aa21.33■■□□□ 1.01
CXXC1-217ENST00000592078 WASHC2AQ641Q2 1341 aa21.33■■□□□ 1.01
CXXC1-217ENST00000592078 ZCRB1Q8TBF4 217 aaKnown RBP21.33■■□□□ 1.01
CXXC1-217ENST00000592078 COL24A1Q17RW2 1714 aa21.32■■□□□ 1
CXXC1-217ENST00000592078 KIF7Q2M1P5 1343 aa21.32■■□□□ 1
CXXC1-217ENST00000592078 PNPLA7Q6ZV29 1317 aa21.32■■□□□ 1
CXXC1-217ENST00000592078 AMPHP49418 695 aa21.32■■□□□ 1
CXXC1-217ENST00000592078 FLAD1Q8NFF5 587 aa21.32■■□□□ 1
CXXC1-217ENST00000592078 SYTL4Q96C24 671 aaPredicted RBP21.32■■□□□ 1
CXXC1-217ENST00000592078 GIGYF1O75420 1035 aaPredicted RBP21.31■■□□□ 1
CXXC1-217ENST00000592078 PRIM1P49642 420 aaKnown RBP21.31■■□□□ 1
CXXC1-217ENST00000592078 HOXC9P31274 260 aa21.3■■□□□ 1
CXXC1-217ENST00000592078 RTL1A6NKG5 1358 aa21.3■■□□□ 1
CXXC1-217ENST00000592078 CCNL1Q9UK58 526 aaPredicted RBP21.29■■□□□ 1
CXXC1-217ENST00000592078 KLHL34Q8N239 644 aa21.28■■□□□ 1
CXXC1-217ENST00000592078 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
CXXC1-217ENST00000592078 MAP3K19Q56UN5 1328 aa21.28■■□□□ 1
CXXC1-217ENST00000592078 SMG6Q86US8 1419 aaKnown RBP21.27■■□□□ 1
CXXC1-217ENST00000592078 RAPGEF4Q8WZA2 1011 aa21.26■□□□□ 0.99
CXXC1-217ENST00000592078 LY75O60449 1722 aa21.25■□□□□ 0.99
CXXC1-217ENST00000592078 PELP1Q8IZL8 1130 aaKnown RBP21.25■□□□□ 0.99
CXXC1-217ENST00000592078 KIF24Q5T7B8 1368 aa21.24■□□□□ 0.99
CXXC1-217ENST00000592078 CD2APQ9Y5K6 639 aa21.24■□□□□ 0.99
CXXC1-217ENST00000592078 UTRNP46939 3433 aa21.24■□□□□ 0.99
CXXC1-217ENST00000592078 NSD2O96028 1365 aa21.23■□□□□ 0.99
CXXC1-217ENST00000592078 MSH5O43196 834 aa21.22■□□□□ 0.99
CXXC1-217ENST00000592078 TATP17735 454 aaPredicted RBP21.21■□□□□ 0.99
CXXC1-217ENST00000592078 PCDH11XQ9BZA7 1347 aa21.21■□□□□ 0.99
CXXC1-217ENST00000592078 PCDH11YQ9BZA8 1340 aa21.21■□□□□ 0.99
CXXC1-217ENST00000592078 SMARCC1Q92922 1105 aaPredicted RBP21.2■□□□□ 0.98
CXXC1-217ENST00000592078 DOT1LQ8TEK3 1739 aa21.2■□□□□ 0.98
CXXC1-217ENST00000592078 NSD3Q9BZ95 1437 aa21.2■□□□□ 0.98
CXXC1-217ENST00000592078 COL23A1Q86Y22 540 aaPredicted RBP21.19■□□□□ 0.98
CXXC1-217ENST00000592078 NLGN2Q8NFZ4 835 aa21.18■□□□□ 0.98
CXXC1-217ENST00000592078 NBPF6Q5VWK0 638 aa21.17■□□□□ 0.98
CXXC1-217ENST00000592078 NBPF4Q96M43 638 aa21.17■□□□□ 0.98
CXXC1-217ENST00000592078 INSRP06213 1382 aa21.17■□□□□ 0.98
CXXC1-217ENST00000592078 MEGF6O75095 1541 aa21.17■□□□□ 0.98
CXXC1-217ENST00000592078 KCNQ4P56696 695 aa21.16■□□□□ 0.98
CXXC1-217ENST00000592078 FYB1O15117 783 aa21.15■□□□□ 0.98
CXXC1-217ENST00000592078 DDX10Q13206 875 aaKnown RBP21.15■□□□□ 0.98
CXXC1-217ENST00000592078 TUBGCP6Q96RT7 1819 aa21.15■□□□□ 0.98
CXXC1-217ENST00000592078 FLT4P35916 1363 aa21.14■□□□□ 0.98
CXXC1-217ENST00000592078 SHANK3Q9BYB0 1731 aa21.13■□□□□ 0.97
CXXC1-217ENST00000592078 YBX3P16989 372 aaKnown RBP eCLIP21.13■□□□□ 0.97
CXXC1-217ENST00000592078 PALLDQ8WX93 1383 aa21.12■□□□□ 0.97
CXXC1-217ENST00000592078 PER1O15534 1290 aaPredicted RBP21.12■□□□□ 0.97
CXXC1-217ENST00000592078 POLR3GLQ9BT43 218 aa21.12■□□□□ 0.97
CXXC1-217ENST00000592078 RRS1Q15050 365 aaKnown RBP21.11■□□□□ 0.97
CXXC1-217ENST00000592078 AK7Q96M32 723 aa21.11■□□□□ 0.97
CXXC1-217ENST00000592078 PANK3Q9H999 370 aa21.11■□□□□ 0.97
CXXC1-217ENST00000592078 GPBP1L1Q9HC44 474 aaPredicted RBP21.11■□□□□ 0.97
CXXC1-217ENST00000592078 C5P01031 1676 aa21.1■□□□□ 0.97
CXXC1-217ENST00000592078 IFFO2Q5TF58 517 aa21.1■□□□□ 0.97
CXXC1-217ENST00000592078 SSFA2P28290 1259 aa21.09■□□□□ 0.97
CXXC1-217ENST00000592078 MPRIPQ6WCQ1 1025 aa21.09■□□□□ 0.97
CXXC1-217ENST00000592078 GGNBP2Q9H3C7 697 aa21.09■□□□□ 0.97
CXXC1-217ENST00000592078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.09■□□□□ 0.97
CXXC1-217ENST00000592078 SPG7Q9UQ90 795 aa21.09■□□□□ 0.97
CXXC1-217ENST00000592078 NKX1-1Q15270 411 aaPredicted RBP21.08■□□□□ 0.97
CXXC1-217ENST00000592078 RGPD2P0DJD1 1756 aa21.08■□□□□ 0.96
CXXC1-217ENST00000592078 ATP10DQ9P241 1426 aa21.07■□□□□ 0.96
CXXC1-217ENST00000592078 FBLN1P23142 703 aa21.07■□□□□ 0.96
CXXC1-217ENST00000592078 CARD14Q9BXL6 1004 aa21.07■□□□□ 0.96
CXXC1-217ENST00000592078 PLEKHG2Q9H7P9 1386 aa21.07■□□□□ 0.96
CXXC1-217ENST00000592078 HSP90AB2PQ58FF8 381 aa21.06■□□□□ 0.96
CXXC1-217ENST00000592078 MSL1Q68DK7 614 aa21.06■□□□□ 0.96
CXXC1-217ENST00000592078 USHBP1Q8N6Y0 703 aa21.06■□□□□ 0.96
CXXC1-217ENST00000592078 CYP27B1O15528 508 aa21.05■□□□□ 0.96
CXXC1-217ENST00000592078 ADCY9O60503 1353 aa21.03■□□□□ 0.96
CXXC1-217ENST00000592078 TAF1LQ8IZX4 1826 aa21.03■□□□□ 0.96
CXXC1-217ENST00000592078 C4BP0C0L5 1744 aa21.02■□□□□ 0.96
CXXC1-217ENST00000592078 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.02■□□□□ 0.96
CXXC1-217ENST00000592078 HSPA6P17066 643 aa21.02■□□□□ 0.96
CXXC1-217ENST00000592078 LOC102724428A0A0B4J2F2 783 aa21.01■□□□□ 0.95
CXXC1-217ENST00000592078 SIK1P57059 783 aa21.01■□□□□ 0.95
CXXC1-217ENST00000592078 PIGBQ92521 554 aa21.01■□□□□ 0.95
CXXC1-217ENST00000592078 NCAPD2Q15021 1401 aa21.01■□□□□ 0.95
CXXC1-217ENST00000592078 NPC1L1Q9UHC9 1359 aa21■□□□□ 0.95
CXXC1-217ENST00000592078 TMOD3Q9NYL9 352 aa21■□□□□ 0.95
CXXC1-217ENST00000592078 IGSF1Q8N6C5 1336 aa21■□□□□ 0.95
CXXC1-217ENST00000592078 AMER1Q5JTC6 1135 aaPredicted RBP20.99■□□□□ 0.95
CXXC1-217ENST00000592078 DIEXFQ68CQ4 756 aaKnown RBP20.99■□□□□ 0.95
CXXC1-217ENST00000592078 IFNL2Q8IZJ0 200 aa20.99■□□□□ 0.95
CXXC1-217ENST00000592078 PKD1L3Q7Z443 1732 aa20.98■□□□□ 0.95
CXXC1-217ENST00000592078 TGFB2P61812 414 aa20.98■□□□□ 0.95
CXXC1-217ENST00000592078 KNSTRNQ9Y448 316 aa20.98■□□□□ 0.95
CXXC1-217ENST00000592078 KIF20BQ96Q89 1820 aa20.98■□□□□ 0.95
CXXC1-217ENST00000592078 NLGN1Q8N2Q7 840 aa20.97■□□□□ 0.95
CXXC1-217ENST00000592078 PHF14O94880 888 aa20.96■□□□□ 0.95
CXXC1-217ENST00000592078 ITGB4P16144 1822 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms