RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 ST8SIA5O15466 376 aa6.8□□□□□ -1.32
VMP1-212ENST00000591782 LZTS3O60299 673 aaPredicted RBP6.8□□□□□ -1.32
VMP1-212ENST00000591782 SMCPP49901 116 aaPredicted RBP6.8□□□□□ -1.32
VMP1-212ENST00000591782 Q6ZVU0 165 aa6.8□□□□□ -1.32
VMP1-212ENST00000591782 CRIPAKQ8N1N5 446 aa6.8□□□□□ -1.32
VMP1-212ENST00000591782 TRIM52Q96A61 297 aa6.8□□□□□ -1.32
VMP1-212ENST00000591782 OSBPL3Q9H4L5 887 aa6.8□□□□□ -1.32
VMP1-212ENST00000591782 ESF1Q9H501 851 aaKnown RBP6.8□□□□□ -1.32
VMP1-212ENST00000591782 MEIOBQ8N635 442 aa6.79□□□□□ -1.32
VMP1-212ENST00000591782 SIRT1Q96EB6 747 aa6.79□□□□□ -1.32
VMP1-212ENST00000591782 AGBL1Q96MI9 1066 aa6.79□□□□□ -1.32
VMP1-212ENST00000591782 AAASQ9NRG9 546 aa6.79□□□□□ -1.32
VMP1-212ENST00000591782 MKRN1Q9UHC7 482 aaKnown RBP6.79□□□□□ -1.32
VMP1-212ENST00000591782 NOD1Q9Y239 953 aa6.79□□□□□ -1.32
VMP1-212ENST00000591782 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.78□□□□□ -1.32
VMP1-212ENST00000591782 LCE2BO14633 110 aa6.78□□□□□ -1.32
VMP1-212ENST00000591782 ADH1AP07327 375 aa6.78□□□□□ -1.32
VMP1-212ENST00000591782 BMP1P13497 986 aa6.78□□□□□ -1.32
VMP1-212ENST00000591782 KANK4Q5T7N3 995 aaPredicted RBP6.78□□□□□ -1.32
VMP1-212ENST00000591782 KDF1Q8NAX2 398 aaPredicted RBP6.78□□□□□ -1.32
VMP1-212ENST00000591782 ATP5J2-PTCD1G3V325 749 aa6.77□□□□□ -1.33
VMP1-212ENST00000591782 GTF2IP78347 998 aa6.77□□□□□ -1.33
VMP1-212ENST00000591782 RELBQ01201 579 aa6.77□□□□□ -1.33
VMP1-212ENST00000591782 CDCA8Q53HL2 280 aa6.77□□□□□ -1.33
VMP1-212ENST00000591782 CYP2U1Q7Z449 544 aa6.77□□□□□ -1.33
VMP1-212ENST00000591782 DACH1Q9UI36 760 aa6.77□□□□□ -1.33
VMP1-212ENST00000591782 STAU1O95793 577 aaKnown RBP6.76□□□□□ -1.33
VMP1-212ENST00000591782 SRPK2P78362 688 aaKnown RBP6.76□□□□□ -1.33
VMP1-212ENST00000591782 CLDN10P78369 228 aa6.76□□□□□ -1.33
VMP1-212ENST00000591782 MRPL14Q6P1L8 145 aaKnown RBP6.76□□□□□ -1.33
VMP1-212ENST00000591782 TRIM46Q7Z4K8 759 aa6.76□□□□□ -1.33
VMP1-212ENST00000591782 LINC00528Q8N1L1 170 aa6.76□□□□□ -1.33
VMP1-212ENST00000591782 VRTNQ9H8Y1 702 aa6.76□□□□□ -1.33
VMP1-212ENST00000591782 PCDHGA11Q9Y5H2 935 aa6.76□□□□□ -1.33
VMP1-212ENST00000591782 PTGIRP43119 386 aa6.75□□□□□ -1.33
VMP1-212ENST00000591782 C6orf118Q5T5N4 469 aa6.75□□□□□ -1.33
VMP1-212ENST00000591782 TRIM50Q86XT4 487 aa6.75□□□□□ -1.33
VMP1-212ENST00000591782 OGFOD1Q8N543 542 aa6.75□□□□□ -1.33
VMP1-212ENST00000591782 TSEN34Q9BSV6 310 aaKnown RBP6.75□□□□□ -1.33
VMP1-212ENST00000591782 ZNF395Q9H8N7 513 aaPredicted RBP6.75□□□□□ -1.33
VMP1-212ENST00000591782 ARHGEF10LQ9HCE6 1279 aa6.75□□□□□ -1.33
VMP1-212ENST00000591782 RAB6BQ9NRW1 208 aa6.75□□□□□ -1.33
VMP1-212ENST00000591782 KIAA1024Q9UPX6 916 aa6.75□□□□□ -1.33
VMP1-212ENST00000591782 UPP2O95045 317 aa6.74□□□□□ -1.33
VMP1-212ENST00000591782 GNRH1P01148 92 aa6.74□□□□□ -1.33
VMP1-212ENST00000591782 BMP2P12643 396 aa6.74□□□□□ -1.33
VMP1-212ENST00000591782 RASA1P20936 1047 aa6.74□□□□□ -1.33
VMP1-212ENST00000591782 ATP1A2P50993 1020 aa6.74□□□□□ -1.33
VMP1-212ENST00000591782 PSME1Q06323 249 aa6.74□□□□□ -1.33
VMP1-212ENST00000591782 CRTC2Q53ET0 693 aaPredicted RBP6.74□□□□□ -1.33
VMP1-212ENST00000591782 PBXIP1Q96AQ6 731 aa6.74□□□□□ -1.33
VMP1-212ENST00000591782 ZNF594Q96JF6 807 aaPredicted RBP6.74□□□□□ -1.33
VMP1-212ENST00000591782 PURBQ96QR8 312 aaKnown RBP6.74□□□□□ -1.33
VMP1-212ENST00000591782 ATP13A2Q9NQ11 1180 aa6.74□□□□□ -1.33
VMP1-212ENST00000591782 DNAAF2Q9NVR5 837 aaKnown RBP6.74□□□□□ -1.33
VMP1-212ENST00000591782 A0A1W2PRU2 124 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 USP17L15C9J2P7 530 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 USP17L10C9JJH3 530 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 USP17L13C9JLJ4 530 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 USP17L12C9JPN9 530 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 USP17L11C9JVI0 530 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 USP17L21D6R901 530 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 USP17L18D6R9N7 530 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 USP17L22D6RA61 530 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 USP17L17D6RBQ6 530 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 USP17L19D6RCP7 530 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 USP17L20D6RJB6 530 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 ZBTB7BO15156 539 aaPredicted RBP6.73□□□□□ -1.33
VMP1-212ENST00000591782 SCNN1DP51172 638 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 USP17L24Q0WX57 530 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 LARP1Q6PKG0 1096 aaKnown RBP6.73□□□□□ -1.33
VMP1-212ENST00000591782 ZFP42Q96MM3 310 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 ETNK1Q9HBU6 452 aa6.73□□□□□ -1.33
VMP1-212ENST00000591782 FAM196BA6NMK8 535 aa6.72□□□□□ -1.33
VMP1-212ENST00000591782 TMEM229AB2RXF0 380 aa6.72□□□□□ -1.33
VMP1-212ENST00000591782 SPINT1O43278 529 aa6.72□□□□□ -1.33
VMP1-212ENST00000591782 IL2RAP01589 272 aa6.72□□□□□ -1.33
VMP1-212ENST00000591782 GDF10P55107 478 aa6.72□□□□□ -1.33
VMP1-212ENST00000591782 PTK7Q13308 1070 aa6.72□□□□□ -1.33
VMP1-212ENST00000591782 SCARF1Q14162 830 aa6.72□□□□□ -1.33
VMP1-212ENST00000591782 LARGE2Q8N3Y3 721 aa6.72□□□□□ -1.33
VMP1-212ENST00000591782 TPCN2Q8NHX9 752 aa6.72□□□□□ -1.33
VMP1-212ENST00000591782 INSM2Q96T92 566 aaPredicted RBP6.72□□□□□ -1.33
VMP1-212ENST00000591782 MEN1O00255 615 aa6.71□□□□□ -1.34
VMP1-212ENST00000591782 DKK1O94907 266 aa6.71□□□□□ -1.34
VMP1-212ENST00000591782 CLN3Q13286 438 aa6.71□□□□□ -1.34
VMP1-212ENST00000591782 CCDC102BQ68D86 513 aa6.71□□□□□ -1.34
VMP1-212ENST00000591782 SIX5Q8N196 739 aa6.71□□□□□ -1.34
VMP1-212ENST00000591782 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.71□□□□□ -1.34
VMP1-212ENST00000591782 INHAP05111 366 aa6.7□□□□□ -1.34
VMP1-212ENST00000591782 CTSOP43234 321 aaPredicted RBP6.7□□□□□ -1.34
VMP1-212ENST00000591782 DPYDQ12882 1025 aa6.7□□□□□ -1.34
VMP1-212ENST00000591782 ESCO1Q5FWF5 840 aa6.7□□□□□ -1.34
VMP1-212ENST00000591782 CNKSR1Q969H4 720 aa6.7□□□□□ -1.34
VMP1-212ENST00000591782 ESYT1Q9BSJ8 1104 aa6.7□□□□□ -1.34
VMP1-212ENST00000591782 POLMQ9NP87 494 aaPredicted RBP6.7□□□□□ -1.34
VMP1-212ENST00000591782 ZNF358Q9NW07 568 aa6.7□□□□□ -1.34
VMP1-212ENST00000591782 GMPR2Q9P2T1 348 aaKnown RBP6.7□□□□□ -1.34
VMP1-212ENST00000591782 SFI1A8K8P3 1242 aa6.69□□□□□ -1.34
VMP1-212ENST00000591782 WASLO00401 505 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms