RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 ANKRD36BQ8N2N9 1353 aa24.15■■□□□ 1.46
POLR2E-208ENST00000591709 GRIN3BO60391 1043 aa24.14■■□□□ 1.45
POLR2E-208ENST00000591709 MSH5O43196 834 aa24.13■■□□□ 1.45
POLR2E-208ENST00000591709 EDC4Q6P2E9 1401 aaKnown RBP24.12■■□□□ 1.45
POLR2E-208ENST00000591709 PRIM1P49642 420 aaKnown RBP24.12■■□□□ 1.45
POLR2E-208ENST00000591709 TRIM26Q12899 539 aaPredicted RBP24.12■■□□□ 1.45
POLR2E-208ENST00000591709 LTV1Q96GA3 475 aaPredicted RBP24.12■■□□□ 1.45
POLR2E-208ENST00000591709 MSL1Q68DK7 614 aa24.11■■□□□ 1.45
POLR2E-208ENST00000591709 CCNL1Q9UK58 526 aaPredicted RBP24.1■■□□□ 1.45
POLR2E-208ENST00000591709 MEGF6O75095 1541 aa24.1■■□□□ 1.45
POLR2E-208ENST00000591709 TMC1Q8TDI8 760 aa24.09■■□□□ 1.45
POLR2E-208ENST00000591709 ITGB4P16144 1822 aa24.08■■□□□ 1.45
POLR2E-208ENST00000591709 COL23A1Q86Y22 540 aaPredicted RBP24.08■■□□□ 1.45
POLR2E-208ENST00000591709 TOGARAM1Q9Y4F4 1720 aa24.07■■□□□ 1.44
POLR2E-208ENST00000591709 A0A1W2PP64 1363 aa24.07■■□□□ 1.44
POLR2E-208ENST00000591709 HDGFL2Q7Z4V5 671 aaPredicted RBP24.07■■□□□ 1.44
POLR2E-208ENST00000591709 GPBP1L1Q9HC44 474 aaPredicted RBP24.07■■□□□ 1.44
POLR2E-208ENST00000591709 UBR3Q6ZT12 1888 aa24.07■■□□□ 1.44
POLR2E-208ENST00000591709 ADCY9O60503 1353 aa24.06■■□□□ 1.44
POLR2E-208ENST00000591709 IP6K1Q92551 441 aa24.06■■□□□ 1.44
POLR2E-208ENST00000591709 ZNF526Q8TF50 670 aaPredicted RBP24.05■■□□□ 1.44
POLR2E-208ENST00000591709 USP47Q96K76 1375 aa24.04■■□□□ 1.44
POLR2E-208ENST00000591709 SLC12A5Q9H2X9 1139 aa24.04■■□□□ 1.44
POLR2E-208ENST00000591709 C4BP0C0L5 1744 aa24.04■■□□□ 1.44
POLR2E-208ENST00000591709 HSPA6P17066 643 aa24.03■■□□□ 1.44
POLR2E-208ENST00000591709 SIN3AQ96ST3 1273 aa24.02■■□□□ 1.44
POLR2E-208ENST00000591709 ZCRB1Q8TBF4 217 aaKnown RBP24.01■■□□□ 1.43
POLR2E-208ENST00000591709 CD2APQ9Y5K6 639 aa23.99■■□□□ 1.43
POLR2E-208ENST00000591709 MAP3K19Q56UN5 1328 aa23.99■■□□□ 1.43
POLR2E-208ENST00000591709 HOXC9P31274 260 aa23.98■■□□□ 1.43
POLR2E-208ENST00000591709 TERF2IPQ9NYB0 399 aa23.98■■□□□ 1.43
POLR2E-208ENST00000591709 WWC3Q9ULE0 1092 aa23.97■■□□□ 1.43
POLR2E-208ENST00000591709 NEUROD1Q13562 356 aa23.96■■□□□ 1.43
POLR2E-208ENST00000591709 FBLN1P23142 703 aa23.95■■□□□ 1.42
POLR2E-208ENST00000591709 AMPHP49418 695 aa23.95■■□□□ 1.42
POLR2E-208ENST00000591709 KIF20BQ96Q89 1820 aa23.94■■□□□ 1.42
POLR2E-208ENST00000591709 PALLDQ8WX93 1383 aa23.93■■□□□ 1.42
POLR2E-208ENST00000591709 IGSF1Q8N6C5 1336 aa23.93■■□□□ 1.42
POLR2E-208ENST00000591709 USHBP1Q8N6Y0 703 aa23.93■■□□□ 1.42
POLR2E-208ENST00000591709 COG3Q96JB2 828 aa23.93■■□□□ 1.42
POLR2E-208ENST00000591709 MAP2P11137 1827 aaKnown RBP23.93■■□□□ 1.42
POLR2E-208ENST00000591709 N4BP2Q86UW6 1770 aaPredicted RBP23.93■■□□□ 1.42
POLR2E-208ENST00000591709 PKD1L3Q7Z443 1732 aa23.93■■□□□ 1.42
POLR2E-208ENST00000591709 CICQ96RK0 1608 aaPredicted RBP23.92■■□□□ 1.42
POLR2E-208ENST00000591709 CARD11Q9BXL7 1154 aa23.92■■□□□ 1.42
POLR2E-208ENST00000591709 RTL1A6NKG5 1358 aa23.91■■□□□ 1.42
POLR2E-208ENST00000591709 KIF13BQ9NQT8 1826 aa23.91■■□□□ 1.42
POLR2E-208ENST00000591709 KIAA1551Q9HCM1 1747 aa23.91■■□□□ 1.42
POLR2E-208ENST00000591709 FLAD1Q8NFF5 587 aa23.9■■□□□ 1.42
POLR2E-208ENST00000591709 NBPF6Q5VWK0 638 aa23.89■■□□□ 1.41
POLR2E-208ENST00000591709 NBPF4Q96M43 638 aa23.89■■□□□ 1.41
POLR2E-208ENST00000591709 SMG6Q86US8 1419 aaKnown RBP23.88■■□□□ 1.41
POLR2E-208ENST00000591709 AMIGO3Q86WK7 504 aa23.88■■□□□ 1.41
POLR2E-208ENST00000591709 RAPGEF4Q8WZA2 1011 aa23.88■■□□□ 1.41
POLR2E-208ENST00000591709 WDR90Q96KV7 1748 aa23.87■■□□□ 1.41
POLR2E-208ENST00000591709 CGNL1Q0VF96 1302 aa23.87■■□□□ 1.41
POLR2E-208ENST00000591709 KIF3CO14782 793 aa23.87■■□□□ 1.41
POLR2E-208ENST00000591709 PHF14O94880 888 aa23.87■■□□□ 1.41
POLR2E-208ENST00000591709 AK7Q96M32 723 aa23.87■■□□□ 1.41
POLR2E-208ENST00000591709 PCDH11XQ9BZA7 1347 aa23.86■■□□□ 1.41
POLR2E-208ENST00000591709 PCDH11YQ9BZA8 1340 aa23.86■■□□□ 1.41
POLR2E-208ENST00000591709 RRS1Q15050 365 aaKnown RBP23.86■■□□□ 1.41
POLR2E-208ENST00000591709 MPRIPQ6WCQ1 1025 aa23.86■■□□□ 1.41
POLR2E-208ENST00000591709 SMIM5Q71RC9 77 aa23.86■■□□□ 1.41
POLR2E-208ENST00000591709 BRCA1P38398 1863 aaKnown RBP23.85■■□□□ 1.41
POLR2E-208ENST00000591709 TATP17735 454 aaPredicted RBP23.84■■□□□ 1.41
POLR2E-208ENST00000591709 NSD3Q9BZ95 1437 aa23.84■■□□□ 1.41
POLR2E-208ENST00000591709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.81■■□□□ 1.4
POLR2E-208ENST00000591709 HMGB2P26583 209 aaKnown RBP23.81■■□□□ 1.4
POLR2E-208ENST00000591709 PUS7Q96PZ0 661 aaKnown RBP23.81■■□□□ 1.4
POLR2E-208ENST00000591709 APLP1P51693 650 aa23.79■■□□□ 1.4
POLR2E-208ENST00000591709 ARFGEF1Q9Y6D6 1849 aa23.78■■□□□ 1.4
POLR2E-208ENST00000591709 CYP27B1O15528 508 aa23.78■■□□□ 1.4
POLR2E-208ENST00000591709 SMARCC1Q92922 1105 aaPredicted RBP23.78■■□□□ 1.4
POLR2E-208ENST00000591709 PXDNLA1KZ92 1463 aa23.78■■□□□ 1.4
POLR2E-208ENST00000591709 SSFA2P28290 1259 aa23.76■■□□□ 1.39
POLR2E-208ENST00000591709 GGNBP2Q9H3C7 697 aa23.76■■□□□ 1.39
POLR2E-208ENST00000591709 INSRP06213 1382 aa23.76■■□□□ 1.39
POLR2E-208ENST00000591709 ANKRD26Q9UPS8 1709 aa23.76■■□□□ 1.39
POLR2E-208ENST00000591709 HSP90AB2PQ58FF8 381 aa23.75■■□□□ 1.39
POLR2E-208ENST00000591709 LINC00116Q8NCU8 138 aa23.75■■□□□ 1.39
POLR2E-208ENST00000591709 PCGF6Q9BYE7 350 aa23.75■■□□□ 1.39
POLR2E-208ENST00000591709 TESK2Q96S53 571 aa23.74■■□□□ 1.39
POLR2E-208ENST00000591709 FLT4P35916 1363 aa23.74■■□□□ 1.39
POLR2E-208ENST00000591709 C4AP0C0L4 1744 aa23.73■■□□□ 1.39
POLR2E-208ENST00000591709 COL5A3P25940 1745 aaPredicted RBP23.73■■□□□ 1.39
POLR2E-208ENST00000591709 PIGBQ92521 554 aa23.73■■□□□ 1.39
POLR2E-208ENST00000591709 LOC102724428A0A0B4J2F2 783 aa23.71■■□□□ 1.39
POLR2E-208ENST00000591709 FYB1O15117 783 aa23.71■■□□□ 1.39
POLR2E-208ENST00000591709 GNPATO15228 680 aa23.71■■□□□ 1.39
POLR2E-208ENST00000591709 TOMM70O94826 608 aa23.71■■□□□ 1.39
POLR2E-208ENST00000591709 SIK1P57059 783 aa23.71■■□□□ 1.39
POLR2E-208ENST00000591709 DNAJC5GQ8N7S2 189 aa23.71■■□□□ 1.39
POLR2E-208ENST00000591709 TONSLQ96HA7 1378 aa23.7■■□□□ 1.38
POLR2E-208ENST00000591709 MMP10P09238 476 aa23.7■■□□□ 1.38
POLR2E-208ENST00000591709 ST20-MTHFSA0A0A6YYL1 179 aa23.69■■□□□ 1.38
POLR2E-208ENST00000591709 NMRK2Q9NPI5 230 aa23.69■■□□□ 1.38
POLR2E-208ENST00000591709 BCS1LQ9Y276 419 aa23.69■■□□□ 1.38
POLR2E-208ENST00000591709 SBF1O95248 1867 aa23.68■■□□□ 1.38
POLR2E-208ENST00000591709 C10orf71Q711Q0 1435 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms