RNA–Protein interactions for RNA: ENST00000591594.5

TMC6-219, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 614 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-219ENST00000591594 TATP17735 454 aaPredicted RBP23■■□□□ 1.27
TMC6-219ENST00000591594 ZCRB1Q8TBF4 217 aaKnown RBP23■■□□□ 1.27
TMC6-219ENST00000591594 SHANK3Q9BYB0 1731 aa22.99■■□□□ 1.27
TMC6-219ENST00000591594 KCNQ2O43526 872 aa22.99■■□□□ 1.27
TMC6-219ENST00000591594 R3HDM1Q15032 1099 aaKnown RBP22.99■■□□□ 1.27
TMC6-219ENST00000591594 PLSCR1O15162 318 aa22.98■■□□□ 1.27
TMC6-219ENST00000591594 NBPF14Q5TI25 921 aa22.97■■□□□ 1.27
TMC6-219ENST00000591594 KAT6BQ8WYB5 2073 aa22.97■■□□□ 1.27
TMC6-219ENST00000591594 DOT1LQ8TEK3 1739 aa22.96■■□□□ 1.27
TMC6-219ENST00000591594 BTAF1O14981 1849 aa22.94■■□□□ 1.26
TMC6-219ENST00000591594 EIF4A2Q14240 407 aaKnown RBP22.94■■□□□ 1.26
TMC6-219ENST00000591594 AMER1Q5JTC6 1135 aaPredicted RBP22.94■■□□□ 1.26
TMC6-219ENST00000591594 SYTL4Q96C24 671 aaPredicted RBP22.94■■□□□ 1.26
TMC6-219ENST00000591594 EYA1Q99502 592 aa22.93■■□□□ 1.26
TMC6-219ENST00000591594 PCDH11XQ9BZA7 1347 aa22.92■■□□□ 1.26
TMC6-219ENST00000591594 PCDH11YQ9BZA8 1340 aa22.92■■□□□ 1.26
TMC6-219ENST00000591594 CNGB1Q14028 1251 aaPredicted RBP22.92■■□□□ 1.26
TMC6-219ENST00000591594 CC2D1BQ5T0F9 858 aaKnown RBP22.92■■□□□ 1.26
TMC6-219ENST00000591594 NCAPD2Q15021 1401 aa22.91■■□□□ 1.26
TMC6-219ENST00000591594 TXNRD1Q16881 649 aa22.9■■□□□ 1.26
TMC6-219ENST00000591594 PKD1L3Q7Z443 1732 aa22.9■■□□□ 1.26
TMC6-219ENST00000591594 PER1O15534 1290 aaPredicted RBP22.89■■□□□ 1.25
TMC6-219ENST00000591594 PRIM1P49642 420 aaKnown RBP22.88■■□□□ 1.25
TMC6-219ENST00000591594 PROM2Q8N271 834 aa22.87■■□□□ 1.25
TMC6-219ENST00000591594 LRP5O75197 1615 aa22.86■■□□□ 1.25
TMC6-219ENST00000591594 ANO8Q9HCE9 1232 aaPredicted RBP22.86■■□□□ 1.25
TMC6-219ENST00000591594 SPG7Q9UQ90 795 aa22.86■■□□□ 1.25
TMC6-219ENST00000591594 IGSF1Q8N6C5 1336 aa22.85■■□□□ 1.25
TMC6-219ENST00000591594 CYP27B1O15528 508 aa22.83■■□□□ 1.25
TMC6-219ENST00000591594 STK32BQ9NY57 414 aa22.83■■□□□ 1.25
TMC6-219ENST00000591594 MTHFSP49914 203 aa22.81■■□□□ 1.24
TMC6-219ENST00000591594 TOGARAM1Q9Y4F4 1720 aa22.8■■□□□ 1.24
TMC6-219ENST00000591594 NPC1L1Q9UHC9 1359 aa22.8■■□□□ 1.24
TMC6-219ENST00000591594 SRCAPQ6ZRS2 3230 aa22.79■■□□□ 1.24
TMC6-219ENST00000591594 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.79■■□□□ 1.241e-8■□□□□ 8.1
TMC6-219ENST00000591594 MPRIPQ6WCQ1 1025 aa22.78■■□□□ 1.24
TMC6-219ENST00000591594 PAPPAQ13219 1627 aa22.78■■□□□ 1.24
TMC6-219ENST00000591594 IL13P35225 146 aa22.77■■□□□ 1.24
TMC6-219ENST00000591594 SLC15A2Q16348 729 aa22.77■■□□□ 1.24
TMC6-219ENST00000591594 AEBP1Q8IUX7 1158 aa22.77■■□□□ 1.24
TMC6-219ENST00000591594 IFNL2Q8IZJ0 200 aa22.77■■□□□ 1.24
TMC6-219ENST00000591594 LY75O60449 1722 aa22.77■■□□□ 1.23
TMC6-219ENST00000591594 PLEKHG2Q9H7P9 1386 aa22.76■■□□□ 1.23
TMC6-219ENST00000591594 ITGB4P16144 1822 aa22.76■■□□□ 1.23
TMC6-219ENST00000591594 PHKG2P15735 406 aa22.76■■□□□ 1.23
TMC6-219ENST00000591594 SLC27A3Q5K4L6 730 aa22.76■■□□□ 1.23
TMC6-219ENST00000591594 SULT6B1Q6IMI4 303 aa22.76■■□□□ 1.23
TMC6-219ENST00000591594 LRRC4BQ9NT99 713 aa22.76■■□□□ 1.23
TMC6-219ENST00000591594 PLEKHO1Q53GL0 409 aaPredicted RBP22.75■■□□□ 1.23
TMC6-219ENST00000591594 CASZ1Q86V15 1759 aa22.74■■□□□ 1.23
TMC6-219ENST00000591594 KCNQ4P56696 695 aa22.74■■□□□ 1.23
TMC6-219ENST00000591594 NKX1-1Q15270 411 aaPredicted RBP22.73■■□□□ 1.23
TMC6-219ENST00000591594 CCNL1Q9UK58 526 aaPredicted RBP22.73■■□□□ 1.23
TMC6-219ENST00000591594 DIAPH1O60610 1272 aaKnown RBP22.72■■□□□ 1.23
TMC6-219ENST00000591594 ZNF530Q6P9A1 599 aaPredicted RBP22.72■■□□□ 1.23
TMC6-219ENST00000591594 ZNF827Q17R98 1081 aa22.71■■□□□ 1.23
TMC6-219ENST00000591594 AMOTQ4VCS5 1084 aa22.71■■□□□ 1.23
TMC6-219ENST00000591594 PDGFDQ9GZP0 370 aaPredicted RBP22.71■■□□□ 1.23
TMC6-219ENST00000591594 SPON1Q9HCB6 807 aa22.71■■□□□ 1.23
TMC6-219ENST00000591594 KDRP35968 1356 aa22.71■■□□□ 1.23
TMC6-219ENST00000591594 PALLDQ8WX93 1383 aa22.71■■□□□ 1.23
TMC6-219ENST00000591594 HMOX1P09601 288 aa22.7■■□□□ 1.22
TMC6-219ENST00000591594 TMOD3Q9NYL9 352 aa22.7■■□□□ 1.22
TMC6-219ENST00000591594 C1orf141Q5JVX7 400 aa22.69■■□□□ 1.22
TMC6-219ENST00000591594 PIGBQ92521 554 aa22.69■■□□□ 1.22
TMC6-219ENST00000591594 ZBTB7AO95365 584 aa22.68■■□□□ 1.22
TMC6-219ENST00000591594 HSP90AB1P08238 724 aaKnown RBP22.68■■□□□ 1.22
TMC6-219ENST00000591594 COL3A1P02461 1466 aaPredicted RBP22.67■■□□□ 1.22
TMC6-219ENST00000591594 SMARCC1Q92922 1105 aaPredicted RBP22.67■■□□□ 1.22
TMC6-219ENST00000591594 PPP1R1BQ9UD71 204 aaPredicted RBP22.67■■□□□ 1.22
TMC6-219ENST00000591594 C5P01031 1676 aa22.66■■□□□ 1.22
TMC6-219ENST00000591594 U2SURPO15042 1029 aaKnown RBP22.66■■□□□ 1.22
TMC6-219ENST00000591594 AKT1S1Q96B36 256 aa22.66■■□□□ 1.22
TMC6-219ENST00000591594 DCAF5Q96JK2 942 aa22.65■■□□□ 1.22
TMC6-219ENST00000591594 CFAP53Q96M91 514 aa22.65■■□□□ 1.22
TMC6-219ENST00000591594 TFCP2L1Q9NZI6 479 aa22.65■■□□□ 1.22
TMC6-219ENST00000591594 TUBGCP6Q96RT7 1819 aa22.64■■□□□ 1.22
TMC6-219ENST00000591594 ATF5Q9Y2D1 282 aaPredicted RBP22.64■■□□□ 1.21
TMC6-219ENST00000591594 KDM6AO15550 1401 aaPredicted RBP22.64■■□□□ 1.21
TMC6-219ENST00000591594 QSER1Q2KHR3 1735 aa22.63■■□□□ 1.21
TMC6-219ENST00000591594 PPP2R1AP30153 589 aa22.62■■□□□ 1.21
TMC6-219ENST00000591594 TAF1LQ8IZX4 1826 aa22.61■■□□□ 1.21
TMC6-219ENST00000591594 ERVV-2B6SEH9 535 aa22.61■■□□□ 1.21
TMC6-219ENST00000591594 CABP4P57796 275 aa22.61■■□□□ 1.21
TMC6-219ENST00000591594 MTFR1LQ9H019 292 aa22.61■■□□□ 1.21
TMC6-219ENST00000591594 ASAP1Q9ULH1 1129 aa22.61■■□□□ 1.21
TMC6-219ENST00000591594 PNPLA7Q6ZV29 1317 aa22.6■■□□□ 1.21
TMC6-219ENST00000591594 AKAP4Q5JQC9 854 aa22.59■■□□□ 1.21
TMC6-219ENST00000591594 C4BP0C0L5 1744 aa22.58■■□□□ 1.21
TMC6-219ENST00000591594 LOC102724428A0A0B4J2F2 783 aa22.58■■□□□ 1.21
TMC6-219ENST00000591594 MSH5O43196 834 aa22.58■■□□□ 1.21
TMC6-219ENST00000591594 HMGB2P26583 209 aaKnown RBP22.58■■□□□ 1.21
TMC6-219ENST00000591594 SIK1P57059 783 aa22.58■■□□□ 1.21
TMC6-219ENST00000591594 ATG3Q9NT62 314 aa22.58■■□□□ 1.21
TMC6-219ENST00000591594 NUDCQ9Y266 331 aa22.57■■□□□ 1.2
TMC6-219ENST00000591594 SCN11AQ9UI33 1791 aa22.57■■□□□ 1.2
TMC6-219ENST00000591594 MTHFSDQ2M296 383 aaKnown RBP22.56■■□□□ 1.2
TMC6-219ENST00000591594 AK7Q96M32 723 aa22.56■■□□□ 1.2
TMC6-219ENST00000591594 ATP6V1AP38606 617 aa22.55■■□□□ 1.2
TMC6-219ENST00000591594 PTGER2P43116 358 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms