RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 USP54Q70EL1 1684 aa14.71□□□□□ -0.05
VPS4B-207ENST00000591519 NME9Q86XW9 330 aa14.71□□□□□ -0.05
VPS4B-207ENST00000591519 MS4A3Q96HJ5 214 aa14.71□□□□□ -0.05
VPS4B-207ENST00000591519 TESK2Q96S53 571 aa14.71□□□□□ -0.05
VPS4B-207ENST00000591519 CCDC7Q96M83 1385 aa14.71□□□□□ -0.06
VPS4B-207ENST00000591519 NUP188Q5SRE5 1749 aa14.7□□□□□ -0.06
VPS4B-207ENST00000591519 EDC4Q6P2E9 1401 aaKnown RBP14.7□□□□□ -0.06
VPS4B-207ENST00000591519 WNK3Q9BYP7 1800 aa14.69□□□□□ -0.06
VPS4B-207ENST00000591519 PTF1AQ7RTS3 328 aa14.69□□□□□ -0.06
VPS4B-207ENST00000591519 RGPD3A6NKT7 1758 aaPredicted RBP14.69□□□□□ -0.06
VPS4B-207ENST00000591519 RGPD4Q7Z3J3 1758 aa14.69□□□□□ -0.06
VPS4B-207ENST00000591519 ERBB3P21860 1342 aa14.68□□□□□ -0.06
VPS4B-207ENST00000591519 ST20-MTHFSA0A0A6YYL1 179 aa14.68□□□□□ -0.06
VPS4B-207ENST00000591519 NINLQ9Y2I6 1382 aa14.68□□□□□ -0.06
VPS4B-207ENST00000591519 PCGF6Q9BYE7 350 aa14.67□□□□□ -0.06
VPS4B-207ENST00000591519 A0A1W2PP64 1363 aa14.67□□□□□ -0.06
VPS4B-207ENST00000591519 PELP1Q8IZL8 1130 aaKnown RBP14.66□□□□□ -0.06
VPS4B-207ENST00000591519 MIER1Q8N108 512 aa14.66□□□□□ -0.06
VPS4B-207ENST00000591519 IP6K1Q92551 441 aa14.65□□□□□ -0.06
VPS4B-207ENST00000591519 SPON1Q9HCB6 807 aa14.65□□□□□ -0.06
VPS4B-207ENST00000591519 NLRP2Q9NX02 1062 aa14.65□□□□□ -0.06
VPS4B-207ENST00000591519 KCNQ2O43526 872 aa14.64□□□□□ -0.07
VPS4B-207ENST00000591519 IL2RBP14784 551 aa14.64□□□□□ -0.07
VPS4B-207ENST00000591519 ANKRD24Q8TF21 1146 aa14.64□□□□□ -0.07
VPS4B-207ENST00000591519 LTN1O94822 1766 aa14.63□□□□□ -0.07
VPS4B-207ENST00000591519 TNS2Q63HR2 1409 aa14.63□□□□□ -0.07
VPS4B-207ENST00000591519 TXNRD1Q16881 649 aa14.62□□□□□ -0.07
VPS4B-207ENST00000591519 ANO8Q9HCE9 1232 aaPredicted RBP14.62□□□□□ -0.07
VPS4B-207ENST00000591519 POTEB2H3BUK9 544 aa14.61□□□□□ -0.07
VPS4B-207ENST00000591519 COG3Q96JB2 828 aa14.6□□□□□ -0.07
VPS4B-207ENST00000591519 ANKRD36BQ8N2N9 1353 aa14.6□□□□□ -0.07
VPS4B-207ENST00000591519 TMF1P82094 1093 aa14.59□□□□□ -0.07
VPS4B-207ENST00000591519 MAP3K19Q56UN5 1328 aa14.59□□□□□ -0.07
VPS4B-207ENST00000591519 FYB1O15117 783 aa14.58□□□□□ -0.08
VPS4B-207ENST00000591519 SLC15A2Q16348 729 aa14.58□□□□□ -0.08
VPS4B-207ENST00000591519 TIMELESSQ9UNS1 1208 aa14.58□□□□□ -0.08
VPS4B-207ENST00000591519 HOXC9P31274 260 aa14.57□□□□□ -0.08
VPS4B-207ENST00000591519 FKBP8Q14318 412 aa14.57□□□□□ -0.08
VPS4B-207ENST00000591519 RASEFQ8IZ41 740 aa14.57□□□□□ -0.08
VPS4B-207ENST00000591519 ACSBG1Q96GR2 724 aa14.57□□□□□ -0.08
VPS4B-207ENST00000591519 PDGFDQ9GZP0 370 aaPredicted RBP14.57□□□□□ -0.08
VPS4B-207ENST00000591519 STK32BQ9NY57 414 aa14.57□□□□□ -0.08
VPS4B-207ENST00000591519 NHSQ6T4R5 1651 aa14.56□□□□□ -0.08
VPS4B-207ENST00000591519 CASZ1Q86V15 1759 aa14.56□□□□□ -0.08
VPS4B-207ENST00000591519 FBLN1P23142 703 aa14.56□□□□□ -0.08
VPS4B-207ENST00000591519 CDCA8Q53HL2 280 aa14.56□□□□□ -0.08
VPS4B-207ENST00000591519 PPP1R1BQ9UD71 204 aaPredicted RBP14.56□□□□□ -0.08
VPS4B-207ENST00000591519 USP47Q96K76 1375 aa14.56□□□□□ -0.08
VPS4B-207ENST00000591519 ATMINO43313 823 aaPredicted RBP14.55□□□□□ -0.08
VPS4B-207ENST00000591519 AMPHP49418 695 aa14.55□□□□□ -0.08
VPS4B-207ENST00000591519 ASTLQ6HA08 431 aaPredicted RBP14.55□□□□□ -0.08
VPS4B-207ENST00000591519 PLCD3Q8N3E9 789 aa14.55□□□□□ -0.08
VPS4B-207ENST00000591519 LTV1Q96GA3 475 aaPredicted RBP14.55□□□□□ -0.08
VPS4B-207ENST00000591519 FAM208AQ9UK61 1670 aaKnown RBP14.55□□□□□ -0.08
VPS4B-207ENST00000591519 PTGER2P43116 358 aa14.54□□□□□ -0.08
VPS4B-207ENST00000591519 OTUD5Q96G74 571 aa14.54□□□□□ -0.08
VPS4B-207ENST00000591519 KAT6BQ8WYB5 2073 aa14.53□□□□□ -0.08
VPS4B-207ENST00000591519 DDX54Q8TDD1 881 aaKnown RBP14.53□□□□□ -0.08
VPS4B-207ENST00000591519 KIF12Q96FN5 646 aa14.53□□□□□ -0.08
VPS4B-207ENST00000591519 RTL1A6NKG5 1358 aa14.52□□□□□ -0.08
VPS4B-207ENST00000591519 CLSPNQ9HAW4 1339 aa14.52□□□□□ -0.08
VPS4B-207ENST00000591519 ZBTB7AO95365 584 aa14.52□□□□□ -0.09
VPS4B-207ENST00000591519 GGNBP2Q9H3C7 697 aa14.52□□□□□ -0.09
VPS4B-207ENST00000591519 METRNQ9UJH8 293 aa14.52□□□□□ -0.09
VPS4B-207ENST00000591519 BTAF1O14981 1849 aa14.51□□□□□ -0.09
VPS4B-207ENST00000591519 RRS1Q15050 365 aaKnown RBP14.51□□□□□ -0.09
VPS4B-207ENST00000591519 SLC27A3Q5K4L6 730 aa14.51□□□□□ -0.09
VPS4B-207ENST00000591519 NBPF6Q5VWK0 638 aa14.51□□□□□ -0.09
VPS4B-207ENST00000591519 ZCRB1Q8TBF4 217 aaKnown RBP14.51□□□□□ -0.09
VPS4B-207ENST00000591519 NBPF4Q96M43 638 aa14.51□□□□□ -0.09
VPS4B-207ENST00000591519 SGIP1Q9BQI5 828 aa14.51□□□□□ -0.09
VPS4B-207ENST00000591519 CARD14Q9BXL6 1004 aa14.51□□□□□ -0.09
VPS4B-207ENST00000591519 MTFR1LQ9H019 292 aa14.51□□□□□ -0.09
VPS4B-207ENST00000591519 LRRC4BQ9NT99 713 aa14.51□□□□□ -0.09
VPS4B-207ENST00000591519 KIF24Q5T7B8 1368 aa14.5□□□□□ -0.09
VPS4B-207ENST00000591519 CGNL1Q0VF96 1302 aa14.5□□□□□ -0.09
VPS4B-207ENST00000591519 TRPC6Q9Y210 931 aa14.5□□□□□ -0.09
VPS4B-207ENST00000591519 PAPPAQ13219 1627 aa14.49□□□□□ -0.09
VPS4B-207ENST00000591519 PRIM1P49642 420 aaKnown RBP14.49□□□□□ -0.09
VPS4B-207ENST00000591519 INSRP06213 1382 aa14.48□□□□□ -0.09
VPS4B-207ENST00000591519 RGPD2P0DJD1 1756 aa14.47□□□□□ -0.09
VPS4B-207ENST00000591519 MAP3K13O43283 966 aa14.47□□□□□ -0.09
VPS4B-207ENST00000591519 ZNF827Q17R98 1081 aa14.47□□□□□ -0.09
VPS4B-207ENST00000591519 HSP90AB2PQ58FF8 381 aa14.47□□□□□ -0.09
VPS4B-207ENST00000591519 MEGF6O75095 1541 aa14.46□□□□□ -0.09
VPS4B-207ENST00000591519 YY1P25490 414 aa14.46□□□□□ -0.09
VPS4B-207ENST00000591519 ATN1P54259 1190 aaPredicted RBP14.46□□□□□ -0.09
VPS4B-207ENST00000591519 SLC16A10Q8TF71 515 aa14.46□□□□□ -0.09
VPS4B-207ENST00000591519 SYT17Q9BSW7 474 aa14.46□□□□□ -0.09
VPS4B-207ENST00000591519 NSD2O96028 1365 aa14.46□□□□□ -0.1
VPS4B-207ENST00000591519 RAPGEF4Q8WZA2 1011 aa14.45□□□□□ -0.1
VPS4B-207ENST00000591519 SHANK3Q9BYB0 1731 aa14.45□□□□□ -0.1
VPS4B-207ENST00000591519 FLT4P35916 1363 aa14.45□□□□□ -0.1
VPS4B-207ENST00000591519 SMG6Q86US8 1419 aaKnown RBP14.44□□□□□ -0.1
VPS4B-207ENST00000591519 TATP17735 454 aaPredicted RBP14.44□□□□□ -0.1
VPS4B-207ENST00000591519 SLC39A7Q92504 469 aa14.44□□□□□ -0.1
VPS4B-207ENST00000591519 SYTL4Q96C24 671 aaPredicted RBP14.44□□□□□ -0.1
VPS4B-207ENST00000591519 ARXQ96QS3 562 aa14.44□□□□□ -0.1
VPS4B-207ENST00000591519 FHDC1Q9C0D6 1143 aaPredicted RBP14.44□□□□□ -0.1
VPS4B-207ENST00000591519 MYOM1P52179 1685 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms