RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 SPG7Q9UQ90 795 aa27.88■■■□□ 2.05
ERCC2-212ENST00000591309 CFAP53Q96M91 514 aa27.87■■■□□ 2.05
ERCC2-212ENST00000591309 IGSF1Q8N6C5 1336 aa27.87■■■□□ 2.05
ERCC2-212ENST00000591309 PCDH11XQ9BZA7 1347 aa27.87■■■□□ 2.05
ERCC2-212ENST00000591309 PCDH11YQ9BZA8 1340 aa27.87■■■□□ 2.05
ERCC2-212ENST00000591309 DIAPH1O60610 1272 aaKnown RBP27.86■■■□□ 2.05
ERCC2-212ENST00000591309 NCAPD2Q15021 1401 aa27.84■■■□□ 2.05
ERCC2-212ENST00000591309 KAT6BQ8WYB5 2073 aa27.84■■■□□ 2.05
ERCC2-212ENST00000591309 IL13P35225 146 aa27.84■■■□□ 2.05
ERCC2-212ENST00000591309 TNS1Q9HBL0 1735 aaKnown RBP27.83■■■□□ 2.05
ERCC2-212ENST00000591309 EZH2Q15910 746 aaKnown RBP27.82■■■□□ 2.04
ERCC2-212ENST00000591309 SYTL4Q96C24 671 aaPredicted RBP27.82■■■□□ 2.04
ERCC2-212ENST00000591309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.82■■■□□ 2.04
ERCC2-212ENST00000591309 SULT6B1Q6IMI4 303 aa27.81■■■□□ 2.04
ERCC2-212ENST00000591309 PARD3Q8TEW0 1356 aa27.81■■■□□ 2.04
ERCC2-212ENST00000591309 SBF2Q86WG5 1849 aa27.81■■■□□ 2.04
ERCC2-212ENST00000591309 KCNQ2O43526 872 aa27.8■■■□□ 2.04
ERCC2-212ENST00000591309 PPP2R1AP30153 589 aa27.8■■■□□ 2.04
ERCC2-212ENST00000591309 PLEKHO1Q53GL0 409 aaPredicted RBP27.8■■■□□ 2.04
ERCC2-212ENST00000591309 CAMKK2Q96RR4 588 aa27.8■■■□□ 2.04
ERCC2-212ENST00000591309 PLSCR1O15162 318 aa27.78■■■□□ 2.04
ERCC2-212ENST00000591309 PLEKHG2Q9H7P9 1386 aa27.77■■■□□ 2.04
ERCC2-212ENST00000591309 U2SURPO15042 1029 aaKnown RBP27.77■■■□□ 2.04
ERCC2-212ENST00000591309 AMOTQ4VCS5 1084 aa27.77■■■□□ 2.04
ERCC2-212ENST00000591309 PTF1AQ7RTS3 328 aa27.77■■■□□ 2.04
ERCC2-212ENST00000591309 AEBP1Q8IUX7 1158 aa27.76■■■□□ 2.03
ERCC2-212ENST00000591309 IFNL2Q8IZJ0 200 aa27.76■■■□□ 2.03
ERCC2-212ENST00000591309 NUDCQ9Y266 331 aa27.76■■■□□ 2.03
ERCC2-212ENST00000591309 CYP27B1O15528 508 aa27.75■■■□□ 2.03
ERCC2-212ENST00000591309 PRIM1P49642 420 aaKnown RBP27.75■■■□□ 2.03
ERCC2-212ENST00000591309 ZNF316A6NFI3 1004 aaPredicted RBP27.74■■■□□ 2.03
ERCC2-212ENST00000591309 HMOX1P09601 288 aa27.74■■■□□ 2.03
ERCC2-212ENST00000591309 NHSQ6T4R5 1651 aa27.73■■■□□ 2.03
ERCC2-212ENST00000591309 RALBP1Q15311 655 aa27.73■■■□□ 2.03
ERCC2-212ENST00000591309 SHANK3Q9BYB0 1731 aa27.72■■■□□ 2.03
ERCC2-212ENST00000591309 NBPF14Q5TI25 921 aa27.72■■■□□ 2.03
ERCC2-212ENST00000591309 PKD1L3Q7Z443 1732 aa27.72■■■□□ 2.03
ERCC2-212ENST00000591309 KDRP35968 1356 aa27.71■■■□□ 2.03
ERCC2-212ENST00000591309 PHKG2P15735 406 aa27.7■■■□□ 2.02
ERCC2-212ENST00000591309 C1orf141Q5JVX7 400 aa27.7■■■□□ 2.02
ERCC2-212ENST00000591309 ZNF530Q6P9A1 599 aaPredicted RBP27.7■■■□□ 2.02
ERCC2-212ENST00000591309 HSP90AB1P08238 724 aaKnown RBP27.69■■■□□ 2.02
ERCC2-212ENST00000591309 NKX1-1Q15270 411 aaPredicted RBP27.68■■■□□ 2.02
ERCC2-212ENST00000591309 TXNRD1Q16881 649 aa27.67■■■□□ 2.02
ERCC2-212ENST00000591309 COL3A1P02461 1466 aaPredicted RBP27.67■■■□□ 2.02
ERCC2-212ENST00000591309 DOT1LQ8TEK3 1739 aa27.67■■■□□ 2.02
ERCC2-212ENST00000591309 MPRIPQ6WCQ1 1025 aa27.66■■■□□ 2.02
ERCC2-212ENST00000591309 U2AF1L5P0DN76 240 aaPredicted RBP27.64■■■□□ 2.02
ERCC2-212ENST00000591309 U2AF1Q01081 240 aaKnown RBP eCLIP27.64■■■□□ 2.02
ERCC2-212ENST00000591309 RGPD3A6NKT7 1758 aaPredicted RBP27.63■■■□□ 2.01
ERCC2-212ENST00000591309 RGPD4Q7Z3J3 1758 aa27.63■■■□□ 2.01
ERCC2-212ENST00000591309 BTAF1O14981 1849 aa27.63■■■□□ 2.01
ERCC2-212ENST00000591309 DCAF5Q96JK2 942 aa27.62■■■□□ 2.01
ERCC2-212ENST00000591309 TMOD3Q9NYL9 352 aa27.62■■■□□ 2.01
ERCC2-212ENST00000591309 PSDA5PKW4 1024 aaPredicted RBP27.61■■■□□ 2.01
ERCC2-212ENST00000591309 RREB1Q92766 1687 aa27.6■■■□□ 2.01
ERCC2-212ENST00000591309 R3HDM1Q15032 1099 aaKnown RBP27.6■■■□□ 2.01
ERCC2-212ENST00000591309 PROM2Q8N271 834 aa27.6■■■□□ 2.01
ERCC2-212ENST00000591309 MYBBP1AQ9BQG0 1328 aaKnown RBP27.6■■■□□ 2.01
ERCC2-212ENST00000591309 AKAP4Q5JQC9 854 aa27.59■■■□□ 2.01
ERCC2-212ENST00000591309 SLC27A3Q5K4L6 730 aa27.58■■■□□ 2.01
ERCC2-212ENST00000591309 SMARCC1Q92922 1105 aaPredicted RBP27.58■■■□□ 2.01
ERCC2-212ENST00000591309 ERVV-2B6SEH9 535 aa27.57■■■□□ 2
ERCC2-212ENST00000591309 NEFMP07197 916 aa27.57■■■□□ 2
ERCC2-212ENST00000591309 STK32BQ9NY57 414 aa27.57■■■□□ 2
ERCC2-212ENST00000591309 NUP188Q5SRE5 1749 aa27.56■■■□□ 2
ERCC2-212ENST00000591309 PRKAR2BP31323 418 aa27.56■■■□□ 2
ERCC2-212ENST00000591309 CABP4P57796 275 aa27.56■■■□□ 2
ERCC2-212ENST00000591309 GAS2L2Q8NHY3 880 aa27.56■■■□□ 2
ERCC2-212ENST00000591309 FCHSD2O94868 740 aa27.55■■■□□ 2
ERCC2-212ENST00000591309 HMGB2P26583 209 aaKnown RBP27.55■■■□□ 2
ERCC2-212ENST00000591309 MTHFSDQ2M296 383 aaKnown RBP27.55■■■□□ 2
ERCC2-212ENST00000591309 PIGBQ92521 554 aa27.55■■■□□ 2
ERCC2-212ENST00000591309 PRKRIP1Q9H875 184 aaPredicted RBP27.54■■■□□ 2
ERCC2-212ENST00000591309 RSPH6AQ9H0K4 717 aa27.53■■■□□ 2
ERCC2-212ENST00000591309 CCNL1Q9UK58 526 aaPredicted RBP27.53■■■□□ 2
ERCC2-212ENST00000591309 PALLDQ8WX93 1383 aa27.52■■■□□ 2
ERCC2-212ENST00000591309 TOGARAM1Q9Y4F4 1720 aa27.52■■■□□ 2
ERCC2-212ENST00000591309 PNNQ9H307 717 aaKnown RBP27.51■■□□□ 1.99
ERCC2-212ENST00000591309 ITGB4P16144 1822 aa27.51■■□□□ 1.99
ERCC2-212ENST00000591309 SLC15A2Q16348 729 aa27.49■■□□□ 1.99
ERCC2-212ENST00000591309 ANO8Q9HCE9 1232 aaPredicted RBP27.49■■□□□ 1.99
ERCC2-212ENST00000591309 LRRC4BQ9NT99 713 aa27.49■■□□□ 1.99
ERCC2-212ENST00000591309 KDM6AO15550 1401 aaPredicted RBP27.48■■□□□ 1.99
ERCC2-212ENST00000591309 GNAT3A8MTJ3 354 aa27.47■■□□□ 1.99
ERCC2-212ENST00000591309 RNMTO43148 476 aaKnown RBP27.47■■□□□ 1.99
ERCC2-212ENST00000591309 KCNQ4P56696 695 aa27.46■■□□□ 1.99
ERCC2-212ENST00000591309 NFATC2IPQ8NCF5 419 aa27.46■■□□□ 1.99
ERCC2-212ENST00000591309 PHACTR3Q96KR7 559 aa27.46■■□□□ 1.99
ERCC2-212ENST00000591309 ASAP1Q9ULH1 1129 aa27.46■■□□□ 1.99
ERCC2-212ENST00000591309 ANP32CO43423 234 aa27.44■■□□□ 1.98
ERCC2-212ENST00000591309 LGR6Q9HBX8 967 aa27.44■■□□□ 1.98
ERCC2-212ENST00000591309 ATG3Q9NT62 314 aa27.44■■□□□ 1.98
ERCC2-212ENST00000591309 MAP3K5Q99683 1374 aa27.44■■□□□ 1.98
ERCC2-212ENST00000591309 WDR43Q15061 677 aaKnown RBP eCLIP27.43■■□□□ 1.98
ERCC2-212ENST00000591309 SLC52A2Q9HAB3 445 aa27.43■■□□□ 1.98
ERCC2-212ENST00000591309 LY75O60449 1722 aa27.43■■□□□ 1.98
ERCC2-212ENST00000591309 MAPK8IP3Q9UPT6 1336 aa27.42■■□□□ 1.98
ERCC2-212ENST00000591309 RTF1Q92541 710 aaKnown RBP27.42■■□□□ 1.98
ERCC2-212ENST00000591309 RBM42Q9BTD8 480 aaKnown RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms