RNA–Protein interactions for RNA: ENST00000590875.1

SLC39A3-206, Transcript of solute carrier family 39 member 3, humanhuman

TSL 2

Gene SLC39A3, Length 572 nt, Biotype processed transcript, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-206ENST00000590875 USHBP1Q8N6Y0 703 aa28.32■■■□□ 2.12
SLC39A3-206ENST00000590875 SYTL4Q96C24 671 aaPredicted RBP28.32■■■□□ 2.12
SLC39A3-206ENST00000590875 SMG6Q86US8 1419 aaKnown RBP28.31■■■□□ 2.12
SLC39A3-206ENST00000590875 QSER1Q2KHR3 1735 aa28.3■■■□□ 2.12
SLC39A3-206ENST00000590875 NSD3Q9BZ95 1437 aa28.3■■■□□ 2.12
SLC39A3-206ENST00000590875 PRIM1P49642 420 aaKnown RBP28.3■■■□□ 2.12
SLC39A3-206ENST00000590875 ZNF827Q17R98 1081 aa28.3■■■□□ 2.12
SLC39A3-206ENST00000590875 HSP90AB2PQ58FF8 381 aa28.3■■■□□ 2.12
SLC39A3-206ENST00000590875 MAP2P11137 1827 aaKnown RBP28.29■■■□□ 2.12
SLC39A3-206ENST00000590875 CLSPNQ9HAW4 1339 aa28.29■■■□□ 2.12
SLC39A3-206ENST00000590875 MTFR1LQ9H019 292 aa28.29■■■□□ 2.12
SLC39A3-206ENST00000590875 TUBGCP6Q96RT7 1819 aa28.29■■■□□ 2.12
SLC39A3-206ENST00000590875 INSRP06213 1382 aa28.28■■■□□ 2.12
SLC39A3-206ENST00000590875 FLT4P35916 1363 aa28.27■■■□□ 2.12
SLC39A3-206ENST00000590875 NSD2O96028 1365 aa28.26■■■□□ 2.12
SLC39A3-206ENST00000590875 DCAF8L1A6NGE4 600 aa28.26■■■□□ 2.11
SLC39A3-206ENST00000590875 SLC27A3Q5K4L6 730 aa28.26■■■□□ 2.11
SLC39A3-206ENST00000590875 KIF24Q5T7B8 1368 aa28.25■■■□□ 2.11
SLC39A3-206ENST00000590875 RAPGEF4Q8WZA2 1011 aa28.25■■■□□ 2.11
SLC39A3-206ENST00000590875 CGNL1Q0VF96 1302 aa28.24■■■□□ 2.11
SLC39A3-206ENST00000590875 ANKRD26Q9UPS8 1709 aa28.24■■■□□ 2.11
SLC39A3-206ENST00000590875 AKT1S1Q96B36 256 aa28.24■■■□□ 2.11
SLC39A3-206ENST00000590875 SGIP1Q9BQI5 828 aa28.24■■■□□ 2.11
SLC39A3-206ENST00000590875 TATP17735 454 aaPredicted RBP28.23■■■□□ 2.11
SLC39A3-206ENST00000590875 KCNQ4P56696 695 aa28.23■■■□□ 2.11
SLC39A3-206ENST00000590875 YY1P25490 414 aa28.22■■■□□ 2.11
SLC39A3-206ENST00000590875 EMILIN1Q9Y6C2 1016 aa28.22■■■□□ 2.11
SLC39A3-206ENST00000590875 FHDC1Q9C0D6 1143 aaPredicted RBP28.21■■■□□ 2.11
SLC39A3-206ENST00000590875 ITGB4P16144 1822 aa28.2■■■□□ 2.1
SLC39A3-206ENST00000590875 SYT17Q9BSW7 474 aa28.19■■■□□ 2.1
SLC39A3-206ENST00000590875 COL24A1Q17RW2 1714 aa28.18■■■□□ 2.1
SLC39A3-206ENST00000590875 PKD1L3Q7Z443 1732 aa28.18■■■□□ 2.1
SLC39A3-206ENST00000590875 POLR3GLQ9BT43 218 aa28.18■■■□□ 2.1
SLC39A3-206ENST00000590875 PPM1GO15355 546 aaPredicted RBP28.17■■■□□ 2.1
SLC39A3-206ENST00000590875 TOGARAM1Q9Y4F4 1720 aa28.16■■■□□ 2.1
SLC39A3-206ENST00000590875 ARXQ96QS3 562 aa28.16■■■□□ 2.1
SLC39A3-206ENST00000590875 PNPLA7Q6ZV29 1317 aa28.16■■■□□ 2.1
SLC39A3-206ENST00000590875 PCDH11XQ9BZA7 1347 aa28.16■■■□□ 2.1
SLC39A3-206ENST00000590875 PCDH11YQ9BZA8 1340 aa28.16■■■□□ 2.1
SLC39A3-206ENST00000590875 CCNL1Q9UK58 526 aaPredicted RBP28.15■■■□□ 2.1
SLC39A3-206ENST00000590875 TAF1LQ8IZX4 1826 aa28.14■■■□□ 2.1
SLC39A3-206ENST00000590875 TFCP2L1Q9NZI6 479 aa28.14■■■□□ 2.1
SLC39A3-206ENST00000590875 C5P01031 1676 aa28.13■■■□□ 2.09
SLC39A3-206ENST00000590875 SLC16A10Q8TF71 515 aa28.13■■■□□ 2.09
SLC39A3-206ENST00000590875 CYP27B1O15528 508 aa28.12■■■□□ 2.09
SLC39A3-206ENST00000590875 WASHC2AQ641Q2 1341 aa28.11■■■□□ 2.09
SLC39A3-206ENST00000590875 NCAPD2Q15021 1401 aa28.1■■■□□ 2.09
SLC39A3-206ENST00000590875 CHD4Q14839 1912 aa28.1■■■□□ 2.09
SLC39A3-206ENST00000590875 EIF4G2P78344 907 aaKnown RBP eCLIP28.09■■■□□ 2.09
SLC39A3-206ENST00000590875 HSPA5P11021 654 aaKnown RBP28.08■■■□□ 2.09
SLC39A3-206ENST00000590875 MPRIPQ6WCQ1 1025 aa28.08■■■□□ 2.09
SLC39A3-206ENST00000590875 POLKQ9UBT6 870 aa28.08■■■□□ 2.09
SLC39A3-206ENST00000590875 MAP3K5Q99683 1374 aa28.07■■■□□ 2.08
SLC39A3-206ENST00000590875 CCER1Q8TC90 406 aaPredicted RBP28.06■■■□□ 2.08
SLC39A3-206ENST00000590875 EYA1Q99502 592 aa28.06■■■□□ 2.08
SLC39A3-206ENST00000590875 POLD1P28340 1107 aa28.05■■■□□ 2.08
SLC39A3-206ENST00000590875 TNNT2P45379 298 aaPredicted RBP28.05■■■□□ 2.08
SLC39A3-206ENST00000590875 PALLDQ8WX93 1383 aa28.04■■■□□ 2.08
SLC39A3-206ENST00000590875 UTRNP46939 3433 aa28.04■■■□□ 2.08
SLC39A3-206ENST00000590875 KLHL34Q8N239 644 aa28.03■■■□□ 2.08
SLC39A3-206ENST00000590875 SPG7Q9UQ90 795 aa28.03■■■□□ 2.08
SLC39A3-206ENST00000590875 MSH5O43196 834 aa28.02■■■□□ 2.08
SLC39A3-206ENST00000590875 COL23A1Q86Y22 540 aaPredicted RBP28.02■■■□□ 2.08
SLC39A3-206ENST00000590875 NKX1-1Q15270 411 aaPredicted RBP28.01■■■□□ 2.07
SLC39A3-206ENST00000590875 PANK3Q9H999 370 aa28.01■■■□□ 2.07
SLC39A3-206ENST00000590875 C4BP0C0L5 1744 aa28■■■□□ 2.07
SLC39A3-206ENST00000590875 EIF4A2Q14240 407 aaKnown RBP27.99■■■□□ 2.07
SLC39A3-206ENST00000590875 PIGBQ92521 554 aa27.98■■■□□ 2.07
SLC39A3-206ENST00000590875 SMARCC1Q92922 1105 aaPredicted RBP27.97■■■□□ 2.07
SLC39A3-206ENST00000590875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.97■■■□□ 2.07
SLC39A3-206ENST00000590875 UBR3Q6ZT12 1888 aa27.97■■■□□ 2.07
SLC39A3-206ENST00000590875 PHKG2P15735 406 aa27.93■■■□□ 2.06
SLC39A3-206ENST00000590875 HMGB2P26583 209 aaKnown RBP27.93■■■□□ 2.06
SLC39A3-206ENST00000590875 GPR162Q16538 588 aa27.93■■■□□ 2.06
SLC39A3-206ENST00000590875 MSL1Q68DK7 614 aa27.93■■■□□ 2.06
SLC39A3-206ENST00000590875 IFNL2Q8IZJ0 200 aa27.93■■■□□ 2.06
SLC39A3-206ENST00000590875 NLGN2Q8NFZ4 835 aa27.92■■■□□ 2.06
SLC39A3-206ENST00000590875 FLAD1Q8NFF5 587 aa27.91■■■□□ 2.06
SLC39A3-206ENST00000590875 TMOD3Q9NYL9 352 aa27.91■■■□□ 2.06
SLC39A3-206ENST00000590875 IGSF1Q8N6C5 1336 aa27.91■■■□□ 2.06
SLC39A3-206ENST00000590875 AK7Q96M32 723 aa27.89■■■□□ 2.06
SLC39A3-206ENST00000590875 MORC1Q86VD1 984 aa27.88■■■□□ 2.05
SLC39A3-206ENST00000590875 AMIGO3Q86WK7 504 aa27.88■■■□□ 2.05
SLC39A3-206ENST00000590875 PELP1Q8IZL8 1130 aaKnown RBP27.88■■■□□ 2.05
SLC39A3-206ENST00000590875 ZNF784Q8NCA9 323 aaPredicted RBP27.88■■■□□ 2.05
SLC39A3-206ENST00000590875 ASAP1Q9ULH1 1129 aa27.88■■■□□ 2.05
SLC39A3-206ENST00000590875 LOC102724428A0A0B4J2F2 783 aa27.87■■■□□ 2.05
SLC39A3-206ENST00000590875 SIK1P57059 783 aa27.87■■■□□ 2.05
SLC39A3-206ENST00000590875 SMIM5Q71RC9 77 aa27.86■■■□□ 2.05
SLC39A3-206ENST00000590875 GOLGB1Q14789 3259 aaKnown RBP27.86■■■□□ 2.05
SLC39A3-206ENST00000590875 PLEKHG2Q9H7P9 1386 aa27.86■■■□□ 2.05
SLC39A3-206ENST00000590875 PHF14O94880 888 aa27.85■■■□□ 2.05
SLC39A3-206ENST00000590875 LINC00116Q8NCU8 138 aa27.85■■■□□ 2.05
SLC39A3-206ENST00000590875 ATG3Q9NT62 314 aa27.84■■■□□ 2.05
SLC39A3-206ENST00000590875 KNSTRNQ9Y448 316 aa27.83■■■□□ 2.05
SLC39A3-206ENST00000590875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.82■■■□□ 2.04
SLC39A3-206ENST00000590875 ATP6V1AP38606 617 aa27.82■■■□□ 2.04
SLC39A3-206ENST00000590875 ITPK1Q13572 414 aa27.82■■■□□ 2.04
SLC39A3-206ENST00000590875 PLEKHO1Q53GL0 409 aaPredicted RBP27.81■■■□□ 2.04
SLC39A3-206ENST00000590875 SSFA2P28290 1259 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms