RNA–Protein interactions for RNA: ENST00000590792.1

CCDC58P3-201, Transcript of coiled-coil domain containing 58 pseudogene 3, humanhuman

BASIC

Gene CCDC58P3, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P3-201ENST00000590792 C6orf118Q5T5N4 469 aa9.34□□□□□ -0.91
CCDC58P3-201ENST00000590792 CC2D2BQ6DHV5 1058 aa9.34□□□□□ -0.91
CCDC58P3-201ENST00000590792 MRPL14Q6P1L8 145 aaKnown RBP9.34□□□□□ -0.91
CCDC58P3-201ENST00000590792 Q6ZVU0 165 aa9.34□□□□□ -0.91
CCDC58P3-201ENST00000590792 LINC00528Q8N1L1 170 aa9.34□□□□□ -0.91
CCDC58P3-201ENST00000590792 CHIC2Q9UKJ5 165 aa9.34□□□□□ -0.91
CCDC58P3-201ENST00000590792 MYO15BQ96JP2 1530 aa9.33□□□□□ -0.92
CCDC58P3-201ENST00000590792 ADH1AP07327 375 aa9.33□□□□□ -0.92
CCDC58P3-201ENST00000590792 TBC1D9Q6ZT07 1266 aa9.33□□□□□ -0.92
CCDC58P3-201ENST00000590792 PURBQ96QR8 312 aaKnown RBP9.33□□□□□ -0.92
CCDC58P3-201ENST00000590792 GMPR2Q9P2T1 348 aaKnown RBP9.33□□□□□ -0.92
CCDC58P3-201ENST00000590792 RELBQ01201 579 aa9.32□□□□□ -0.92
CCDC58P3-201ENST00000590792 DEPDC4Q8N2C3 294 aa9.32□□□□□ -0.92
CCDC58P3-201ENST00000590792 ARHGEF11O15085 1522 aa9.31□□□□□ -0.92
CCDC58P3-201ENST00000590792 USP17L5A8MUK1 530 aa9.31□□□□□ -0.92
CCDC58P3-201ENST00000590792 UPP2O95045 317 aa9.31□□□□□ -0.92
CCDC58P3-201ENST00000590792 MYCP01106 439 aaPredicted RBP9.31□□□□□ -0.92
CCDC58P3-201ENST00000590792 BMP2P12643 396 aa9.31□□□□□ -0.92
CCDC58P3-201ENST00000590792 SCARF1Q14162 830 aa9.31□□□□□ -0.92
CCDC58P3-201ENST00000590792 NFATC2IPQ8NCF5 419 aa9.31□□□□□ -0.92
CCDC58P3-201ENST00000590792 ZFP42Q96MM3 310 aa9.31□□□□□ -0.92
CCDC58P3-201ENST00000590792 OSBPL3Q9H4L5 887 aa9.31□□□□□ -0.92
CCDC58P3-201ENST00000590792 ESF1Q9H501 851 aaKnown RBP9.31□□□□□ -0.92
CCDC58P3-201ENST00000590792 POTECB2RU33 542 aa9.3□□□□□ -0.92
CCDC58P3-201ENST00000590792 MAP7D1Q3KQU3 841 aa9.3□□□□□ -0.92
CCDC58P3-201ENST00000590792 TRIM52Q96A61 297 aa9.3□□□□□ -0.92
CCDC58P3-201ENST00000590792 TSEN34Q9BSV6 310 aaKnown RBP9.3□□□□□ -0.92
CCDC58P3-201ENST00000590792 ATP9BO43861 1147 aa9.29□□□□□ -0.92
CCDC58P3-201ENST00000590792 USP4Q13107 963 aa9.29□□□□□ -0.92
CCDC58P3-201ENST00000590792 NCOA4Q13772 614 aa9.29□□□□□ -0.92
CCDC58P3-201ENST00000590792 KDF1Q8NAX2 398 aaPredicted RBP9.29□□□□□ -0.92
CCDC58P3-201ENST00000590792 ZNF395Q9H8N7 513 aaPredicted RBP9.29□□□□□ -0.92
CCDC58P3-201ENST00000590792 USP17L3A6NCW0 530 aa9.28□□□□□ -0.92
CCDC58P3-201ENST00000590792 USP17L4A6NCW7 530 aa9.28□□□□□ -0.92
CCDC58P3-201ENST00000590792 ATP5J2-PTCD1G3V325 749 aa9.28□□□□□ -0.92
CCDC58P3-201ENST00000590792 EML3Q32P44 896 aa9.28□□□□□ -0.92
CCDC58P3-201ENST00000590792 USP17L2Q6R6M4 530 aa9.28□□□□□ -0.92
CCDC58P3-201ENST00000590792 ERICH6Q7L0X2 663 aa9.28□□□□□ -0.92
CCDC58P3-201ENST00000590792 USP17L1Q7RTZ2 530 aa9.28□□□□□ -0.92
CCDC58P3-201ENST00000590792 CYP2U1Q7Z449 544 aa9.28□□□□□ -0.92
CCDC58P3-201ENST00000590792 ZNF775Q96BV0 537 aaPredicted RBP9.28□□□□□ -0.92
CCDC58P3-201ENST00000590792 PPP1R12CQ9BZL4 782 aa9.28□□□□□ -0.92
CCDC58P3-201ENST00000590792 TFIP11Q9UBB9 837 aaKnown RBP9.28□□□□□ -0.92
CCDC58P3-201ENST00000590792 PALM3A6NDB9 673 aaPredicted RBP9.27□□□□□ -0.93
CCDC58P3-201ENST00000590792 FBXO41Q8TF61 875 aa9.27□□□□□ -0.93
CCDC58P3-201ENST00000590792 INSM2Q96T92 566 aaPredicted RBP9.27□□□□□ -0.93
CCDC58P3-201ENST00000590792 PTGIRP43119 386 aa9.26□□□□□ -0.93
CCDC58P3-201ENST00000590792 CYB5RLQ6IPT4 315 aa9.26□□□□□ -0.93
CCDC58P3-201ENST00000590792 SENP2Q9HC62 589 aa9.26□□□□□ -0.93
CCDC58P3-201ENST00000590792 ARHGEF10LQ9HCE6 1279 aa9.26□□□□□ -0.93
CCDC58P3-201ENST00000590792 RAB6BQ9NRW1 208 aa9.26□□□□□ -0.93
CCDC58P3-201ENST00000590792 MAFBQ9Y5Q3 323 aaPredicted RBP9.26□□□□□ -0.93
CCDC58P3-201ENST00000590792 C11orf95C9JLR9 678 aaPredicted RBP9.25□□□□□ -0.93
CCDC58P3-201ENST00000590792 SPINT1O43278 529 aa9.25□□□□□ -0.93
CCDC58P3-201ENST00000590792 STAU1O95793 577 aaKnown RBP9.25□□□□□ -0.93
CCDC58P3-201ENST00000590792 SNRPBP14678 240 aaKnown RBP9.25□□□□□ -0.93
CCDC58P3-201ENST00000590792 SIRT1Q96EB6 747 aa9.25□□□□□ -0.93
CCDC58P3-201ENST00000590792 TRIM47Q96LD4 638 aa9.25□□□□□ -0.93
CCDC58P3-201ENST00000590792 MEN1O00255 615 aa9.24□□□□□ -0.93
CCDC58P3-201ENST00000590792 PLEKHM2Q8IWE5 1019 aa9.24□□□□□ -0.93
CCDC58P3-201ENST00000590792 C1orf115Q9H7X2 142 aa9.24□□□□□ -0.93
CCDC58P3-201ENST00000590792 POLMQ9NP87 494 aaPredicted RBP9.24□□□□□ -0.93
CCDC58P3-201ENST00000590792 NOD1Q9Y239 953 aa9.24□□□□□ -0.93
CCDC58P3-201ENST00000590792 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
CCDC58P3-201ENST00000590792 LMOD1P29536 600 aaPredicted RBP9.23□□□□□ -0.93
CCDC58P3-201ENST00000590792 CTSOP43234 321 aaPredicted RBP9.23□□□□□ -0.93
CCDC58P3-201ENST00000590792 KIFC2Q96AC6 838 aa9.23□□□□□ -0.93
CCDC58P3-201ENST00000590792 NESP48681 1621 aa9.23□□□□□ -0.93
CCDC58P3-201ENST00000590792 A0A1W2PRU2 124 aa9.22□□□□□ -0.93
CCDC58P3-201ENST00000590792 SUPT5HO00267 1087 aaKnown RBP9.22□□□□□ -0.93
CCDC58P3-201ENST00000590792 LZTS3O60299 673 aaPredicted RBP9.22□□□□□ -0.93
CCDC58P3-201ENST00000590792 GTF2IP78347 998 aa9.22□□□□□ -0.93
CCDC58P3-201ENST00000590792 CFAP70Q5T0N1 1121 aa9.22□□□□□ -0.93
CCDC58P3-201ENST00000590792 CCDC97Q96F63 343 aaPredicted RBP9.22□□□□□ -0.93
CCDC58P3-201ENST00000590792 SOS2Q07890 1332 aaPredicted RBP9.22□□□□□ -0.93
CCDC58P3-201ENST00000590792 SMARCA2P51531 1590 aa9.21□□□□□ -0.93
CCDC58P3-201ENST00000590792 TTLL8A6PVC2 850 aa9.21□□□□□ -0.94
CCDC58P3-201ENST00000590792 GNRH1P01148 92 aa9.21□□□□□ -0.94
CCDC58P3-201ENST00000590792 RFX1P22670 979 aa9.21□□□□□ -0.94
CCDC58P3-201ENST00000590792 PSME1Q06323 249 aa9.21□□□□□ -0.94
CCDC58P3-201ENST00000590792 CCDC82Q8N4S0 544 aa9.21□□□□□ -0.94
CCDC58P3-201ENST00000590792 MKRN1Q9UHC7 482 aaKnown RBP9.21□□□□□ -0.94
CCDC58P3-201ENST00000590792 FIGNL2A6NMB9 653 aa9.2□□□□□ -0.94
CCDC58P3-201ENST00000590792 MAN1A2O60476 641 aa9.2□□□□□ -0.94
CCDC58P3-201ENST00000590792 CLN3Q13286 438 aa9.2□□□□□ -0.94
CCDC58P3-201ENST00000590792 FOXD4L5Q5VV16 416 aaPredicted RBP9.2□□□□□ -0.94
CCDC58P3-201ENST00000590792 ETNK1Q9HBU6 452 aa9.2□□□□□ -0.94
CCDC58P3-201ENST00000590792 DNMT3LQ9UJW3 386 aa9.2□□□□□ -0.94
CCDC58P3-201ENST00000590792 PCDHGA11Q9Y5H2 935 aa9.2□□□□□ -0.94
CCDC58P3-201ENST00000590792 ERCC6L2Q5T890 1561 aa9.2□□□□□ -0.94
CCDC58P3-201ENST00000590792 IL2RAP01589 272 aa9.19□□□□□ -0.94
CCDC58P3-201ENST00000590792 SCNN1DP51172 638 aa9.19□□□□□ -0.94
CCDC58P3-201ENST00000590792 CLDN10P78369 228 aa9.19□□□□□ -0.94
CCDC58P3-201ENST00000590792 ILDR2Q71H61 639 aa9.19□□□□□ -0.94
CCDC58P3-201ENST00000590792 NLRP3Q96P20 1036 aa9.19□□□□□ -0.94
CCDC58P3-201ENST00000590792 KIAA1024Q9UPX6 916 aa9.19□□□□□ -0.94
CCDC58P3-201ENST00000590792 GDF10P55107 478 aa9.18□□□□□ -0.94
CCDC58P3-201ENST00000590792 TRIM50Q86XT4 487 aa9.18□□□□□ -0.94
CCDC58P3-201ENST00000590792 OGFOD1Q8N543 542 aa9.18□□□□□ -0.94
CCDC58P3-201ENST00000590792 RNF217Q8TC41 542 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms