RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 HDGFL2Q7Z4V5 671 aaPredicted RBP20.85■□□□□ 0.93
ERCC1-211ENST00000590701 COL23A1Q86Y22 540 aaPredicted RBP20.85■□□□□ 0.93
ERCC1-211ENST00000590701 MSL1Q68DK7 614 aa20.83■□□□□ 0.93
ERCC1-211ENST00000590701 CCNL1Q9UK58 526 aaPredicted RBP20.83■□□□□ 0.93
ERCC1-211ENST00000590701 CEP350Q5VT06 3117 aa20.82■□□□□ 0.92
ERCC1-211ENST00000590701 RGPD2P0DJD1 1756 aa20.82■□□□□ 0.92
ERCC1-211ENST00000590701 LY75O60449 1722 aa20.82■□□□□ 0.92
ERCC1-211ENST00000590701 GRIN3BO60391 1043 aa20.82■□□□□ 0.92
ERCC1-211ENST00000590701 ANKRD36BQ8N2N9 1353 aa20.82■□□□□ 0.92
ERCC1-211ENST00000590701 ZCRB1Q8TBF4 217 aaKnown RBP20.81■□□□□ 0.92
ERCC1-211ENST00000590701 NSD2O96028 1365 aa20.81■□□□□ 0.92
ERCC1-211ENST00000590701 DOT1LQ8TEK3 1739 aa20.81■□□□□ 0.92
ERCC1-211ENST00000590701 TERF2IPQ9NYB0 399 aa20.78■□□□□ 0.92
ERCC1-211ENST00000590701 EDC4Q6P2E9 1401 aaKnown RBP20.78■□□□□ 0.92
ERCC1-211ENST00000590701 MAP3K19Q56UN5 1328 aa20.78■□□□□ 0.92
ERCC1-211ENST00000590701 A0A1W2PP64 1363 aa20.77■□□□□ 0.92
ERCC1-211ENST00000590701 HOXC9P31274 260 aa20.77■□□□□ 0.92
ERCC1-211ENST00000590701 CARD11Q9BXL7 1154 aa20.77■□□□□ 0.92
ERCC1-211ENST00000590701 ATP10DQ9P241 1426 aa20.77■□□□□ 0.91
ERCC1-211ENST00000590701 AMPHP49418 695 aa20.76■□□□□ 0.91
ERCC1-211ENST00000590701 ZNF526Q8TF50 670 aaPredicted RBP20.75■□□□□ 0.91
ERCC1-211ENST00000590701 USHBP1Q8N6Y0 703 aa20.74■□□□□ 0.91
ERCC1-211ENST00000590701 FAM208AQ9UK61 1670 aaKnown RBP20.73■□□□□ 0.91
ERCC1-211ENST00000590701 MEGF6O75095 1541 aa20.73■□□□□ 0.91
ERCC1-211ENST00000590701 USP47Q96K76 1375 aa20.73■□□□□ 0.91
ERCC1-211ENST00000590701 NBPF6Q5VWK0 638 aa20.73■□□□□ 0.91
ERCC1-211ENST00000590701 NBPF4Q96M43 638 aa20.73■□□□□ 0.91
ERCC1-211ENST00000590701 GPBP1L1Q9HC44 474 aaPredicted RBP20.73■□□□□ 0.91
ERCC1-211ENST00000590701 WWC3Q9ULE0 1092 aa20.73■□□□□ 0.91
ERCC1-211ENST00000590701 SMIM5Q71RC9 77 aa20.72■□□□□ 0.91
ERCC1-211ENST00000590701 COG3Q96JB2 828 aa20.72■□□□□ 0.91
ERCC1-211ENST00000590701 CD2APQ9Y5K6 639 aa20.72■□□□□ 0.91
ERCC1-211ENST00000590701 RRS1Q15050 365 aaKnown RBP20.7■□□□□ 0.9
ERCC1-211ENST00000590701 HSPA6P17066 643 aa20.68■□□□□ 0.9
ERCC1-211ENST00000590701 MPRIPQ6WCQ1 1025 aa20.68■□□□□ 0.9
ERCC1-211ENST00000590701 AMIGO3Q86WK7 504 aa20.68■□□□□ 0.9
ERCC1-211ENST00000590701 TAF1LQ8IZX4 1826 aa20.67■□□□□ 0.9
ERCC1-211ENST00000590701 C5P01031 1676 aa20.67■□□□□ 0.9
ERCC1-211ENST00000590701 PUS7Q96PZ0 661 aaKnown RBP20.66■□□□□ 0.9
ERCC1-211ENST00000590701 FLAD1Q8NFF5 587 aa20.65■□□□□ 0.9
ERCC1-211ENST00000590701 RAPGEF4Q8WZA2 1011 aa20.65■□□□□ 0.9
ERCC1-211ENST00000590701 ADCY9O60503 1353 aa20.64■□□□□ 0.89
ERCC1-211ENST00000590701 TATP17735 454 aaPredicted RBP20.64■□□□□ 0.89
ERCC1-211ENST00000590701 PALLDQ8WX93 1383 aa20.63■□□□□ 0.89
ERCC1-211ENST00000590701 PHF14O94880 888 aa20.63■□□□□ 0.89
ERCC1-211ENST00000590701 GGNBP2Q9H3C7 697 aa20.63■□□□□ 0.89
ERCC1-211ENST00000590701 IGSF1Q8N6C5 1336 aa20.62■□□□□ 0.89
ERCC1-211ENST00000590701 HSP90AB2PQ58FF8 381 aa20.62■□□□□ 0.89
ERCC1-211ENST00000590701 CGNL1Q0VF96 1302 aa20.61■□□□□ 0.89
ERCC1-211ENST00000590701 ST20-MTHFSA0A0A6YYL1 179 aa20.61■□□□□ 0.89
ERCC1-211ENST00000590701 FYB1O15117 783 aa20.61■□□□□ 0.89
ERCC1-211ENST00000590701 CYP27B1O15528 508 aa20.61■□□□□ 0.89
ERCC1-211ENST00000590701 TESK2Q96S53 571 aa20.61■□□□□ 0.89
ERCC1-211ENST00000590701 ITGB4P16144 1822 aa20.6■□□□□ 0.89
ERCC1-211ENST00000590701 AK7Q96M32 723 aa20.6■□□□□ 0.89
ERCC1-211ENST00000590701 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.59■□□□□ 0.89
ERCC1-211ENST00000590701 KIF3CO14782 793 aa20.59■□□□□ 0.89
ERCC1-211ENST00000590701 C4BP0C0L5 1744 aa20.58■□□□□ 0.89
ERCC1-211ENST00000590701 PIGBQ92521 554 aa20.58■□□□□ 0.89
ERCC1-211ENST00000590701 UBR3Q6ZT12 1888 aa20.58■□□□□ 0.88
ERCC1-211ENST00000590701 PCDH11XQ9BZA7 1347 aa20.57■□□□□ 0.88
ERCC1-211ENST00000590701 PCDH11YQ9BZA8 1340 aa20.57■□□□□ 0.88
ERCC1-211ENST00000590701 TOGARAM1Q9Y4F4 1720 aa20.57■□□□□ 0.88
ERCC1-211ENST00000590701 SMARCC1Q92922 1105 aaPredicted RBP20.56■□□□□ 0.88
ERCC1-211ENST00000590701 RTL1A6NKG5 1358 aa20.56■□□□□ 0.88
ERCC1-211ENST00000590701 LINC00116Q8NCU8 138 aa20.55■□□□□ 0.88
ERCC1-211ENST00000590701 HMGB2P26583 209 aaKnown RBP20.54■□□□□ 0.88
ERCC1-211ENST00000590701 INSRP06213 1382 aa20.53■□□□□ 0.88
ERCC1-211ENST00000590701 SMG6Q86US8 1419 aaKnown RBP20.53■□□□□ 0.88
ERCC1-211ENST00000590701 MAP2P11137 1827 aaKnown RBP20.51■□□□□ 0.87
ERCC1-211ENST00000590701 LOC102724428A0A0B4J2F2 783 aa20.51■□□□□ 0.87
ERCC1-211ENST00000590701 SIK1P57059 783 aa20.51■□□□□ 0.87
ERCC1-211ENST00000590701 ITPK1Q13572 414 aa20.51■□□□□ 0.87
ERCC1-211ENST00000590701 ASAP1Q9ULH1 1129 aa20.51■□□□□ 0.87
ERCC1-211ENST00000590701 SSFA2P28290 1259 aa20.5■□□□□ 0.87
ERCC1-211ENST00000590701 DNAJC5GQ8N7S2 189 aa20.5■□□□□ 0.87
ERCC1-211ENST00000590701 A0A0G2JLW4 131 aa20.49■□□□□ 0.87
ERCC1-211ENST00000590701 GNPATO15228 680 aa20.49■□□□□ 0.87
ERCC1-211ENST00000590701 NKX1-1Q15270 411 aaPredicted RBP20.49■□□□□ 0.87
ERCC1-211ENST00000590701 EMILIN1Q9Y6C2 1016 aa20.49■□□□□ 0.87
ERCC1-211ENST00000590701 N4BP2Q86UW6 1770 aaPredicted RBP20.49■□□□□ 0.87
ERCC1-211ENST00000590701 TONSLQ96HA7 1378 aa20.48■□□□□ 0.87
ERCC1-211ENST00000590701 MMP10P09238 476 aa20.48■□□□□ 0.87
ERCC1-211ENST00000590701 ATP6V1AP38606 617 aa20.48■□□□□ 0.87
ERCC1-211ENST00000590701 FLT4P35916 1363 aa20.47■□□□□ 0.87
ERCC1-211ENST00000590701 APLP1P51693 650 aa20.47■□□□□ 0.87
ERCC1-211ENST00000590701 BCS1LQ9Y276 419 aa20.47■□□□□ 0.87
ERCC1-211ENST00000590701 PPM1GO15355 546 aaPredicted RBP20.46■□□□□ 0.87
ERCC1-211ENST00000590701 ARHGAP27Q6ZUM4 889 aa20.46■□□□□ 0.87
ERCC1-211ENST00000590701 TOMM70O94826 608 aa20.45■□□□□ 0.86
ERCC1-211ENST00000590701 NMRK2Q9NPI5 230 aa20.45■□□□□ 0.86
ERCC1-211ENST00000590701 TMOD3Q9NYL9 352 aa20.45■□□□□ 0.86
ERCC1-211ENST00000590701 SPG7Q9UQ90 795 aa20.45■□□□□ 0.86
ERCC1-211ENST00000590701 PKD1L3Q7Z443 1732 aa20.44■□□□□ 0.86
ERCC1-211ENST00000590701 CARD14Q9BXL6 1004 aa20.44■□□□□ 0.86
ERCC1-211ENST00000590701 ATG3Q9NT62 314 aa20.44■□□□□ 0.86
ERCC1-211ENST00000590701 NSD3Q9BZ95 1437 aa20.44■□□□□ 0.86
ERCC1-211ENST00000590701 SLC24A1O60721 1099 aa20.43■□□□□ 0.86
ERCC1-211ENST00000590701 EYA1Q99502 592 aa20.43■□□□□ 0.86
ERCC1-211ENST00000590701 KIAA1551Q9HCM1 1747 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms