RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 SLC15A2Q16348 729 aa22.41■■□□□ 1.18
GCDH-213ENST00000590627 FAM208AQ9UK61 1670 aaKnown RBP22.41■■□□□ 1.18
GCDH-213ENST00000590627 IP6K1Q92551 441 aa22.4■■□□□ 1.18
GCDH-213ENST00000590627 DCAF8L1A6NGE4 600 aa22.39■■□□□ 1.17
GCDH-213ENST00000590627 PPP2R1AP30153 589 aa22.39■■□□□ 1.17
GCDH-213ENST00000590627 ACSBG1Q96GR2 724 aa22.38■■□□□ 1.17
GCDH-213ENST00000590627 PDGFDQ9GZP0 370 aaPredicted RBP22.38■■□□□ 1.17
GCDH-213ENST00000590627 BTAF1O14981 1849 aa22.36■■□□□ 1.17
GCDH-213ENST00000590627 ZBTB7AO95365 584 aa22.36■■□□□ 1.17
GCDH-213ENST00000590627 CCER2I3L3R5 266 aa22.35■■□□□ 1.17
GCDH-213ENST00000590627 PAPPAQ13219 1627 aa22.35■■□□□ 1.17
GCDH-213ENST00000590627 KAT6BQ8WYB5 2073 aa22.34■■□□□ 1.17
GCDH-213ENST00000590627 YY1P25490 414 aa22.34■■□□□ 1.17
GCDH-213ENST00000590627 PTGER2P43116 358 aa22.34■■□□□ 1.17
GCDH-213ENST00000590627 TNNT2P45379 298 aaPredicted RBP22.34■■□□□ 1.17
GCDH-213ENST00000590627 MTFR1LQ9H019 292 aa22.33■■□□□ 1.17
GCDH-213ENST00000590627 POLKQ9UBT6 870 aa22.32■■□□□ 1.16
GCDH-213ENST00000590627 ATF5Q9Y2D1 282 aaPredicted RBP22.32■■□□□ 1.16
GCDH-213ENST00000590627 MAP3K19Q56UN5 1328 aa22.31■■□□□ 1.16
GCDH-213ENST00000590627 SMG6Q86US8 1419 aaKnown RBP22.31■■□□□ 1.16
GCDH-213ENST00000590627 HOXC9P31274 260 aa22.31■■□□□ 1.16
GCDH-213ENST00000590627 AMPHP49418 695 aa22.3■■□□□ 1.16
GCDH-213ENST00000590627 LTV1Q96GA3 475 aaPredicted RBP22.3■■□□□ 1.16
GCDH-213ENST00000590627 RTL1A6NKG5 1358 aa22.29■■□□□ 1.16
GCDH-213ENST00000590627 FBLN1P23142 703 aa22.29■■□□□ 1.16
GCDH-213ENST00000590627 MTHFSP49914 203 aa22.29■■□□□ 1.16
GCDH-213ENST00000590627 KIF24Q5T7B8 1368 aa22.28■■□□□ 1.16
GCDH-213ENST00000590627 DDX54Q8TDD1 881 aaKnown RBP22.28■■□□□ 1.16
GCDH-213ENST00000590627 SGIP1Q9BQI5 828 aa22.28■■□□□ 1.16
GCDH-213ENST00000590627 INSRP06213 1382 aa22.27■■□□□ 1.16
GCDH-213ENST00000590627 RRS1Q15050 365 aaKnown RBP22.27■■□□□ 1.16
GCDH-213ENST00000590627 SLC27A3Q5K4L6 730 aa22.27■■□□□ 1.16
GCDH-213ENST00000590627 LRRC4BQ9NT99 713 aa22.26■■□□□ 1.15
GCDH-213ENST00000590627 RGPD2P0DJD1 1756 aa22.25■■□□□ 1.15
GCDH-213ENST00000590627 CCDC184Q52MB2 194 aa22.25■■□□□ 1.15
GCDH-213ENST00000590627 SYT17Q9BSW7 474 aa22.25■■□□□ 1.15
GCDH-213ENST00000590627 EMILIN1Q9Y6C2 1016 aa22.25■■□□□ 1.15
GCDH-213ENST00000590627 QSER1Q2KHR3 1735 aa22.24■■□□□ 1.15
GCDH-213ENST00000590627 ZNF827Q17R98 1081 aa22.24■■□□□ 1.15
GCDH-213ENST00000590627 ZCRB1Q8TBF4 217 aaKnown RBP22.24■■□□□ 1.15
GCDH-213ENST00000590627 FHDC1Q9C0D6 1143 aaPredicted RBP22.24■■□□□ 1.15
GCDH-213ENST00000590627 MAP2P11137 1827 aaKnown RBP22.24■■□□□ 1.15
GCDH-213ENST00000590627 SHANK3Q9BYB0 1731 aa22.23■■□□□ 1.15
GCDH-213ENST00000590627 CFAP53Q96M91 514 aa22.23■■□□□ 1.15
GCDH-213ENST00000590627 MRS2Q9HD23 443 aa22.23■■□□□ 1.15
GCDH-213ENST00000590627 DOT1LQ8TEK3 1739 aa22.23■■□□□ 1.15
GCDH-213ENST00000590627 MEGF6O75095 1541 aa22.22■■□□□ 1.15
GCDH-213ENST00000590627 SLC16A10Q8TF71 515 aa22.22■■□□□ 1.15
GCDH-213ENST00000590627 AKT1S1Q96B36 256 aa22.22■■□□□ 1.15
GCDH-213ENST00000590627 FLT4P35916 1363 aa22.22■■□□□ 1.15
GCDH-213ENST00000590627 ARXQ96QS3 562 aa22.21■■□□□ 1.15
GCDH-213ENST00000590627 MAP3K5Q99683 1374 aa22.21■■□□□ 1.15
GCDH-213ENST00000590627 UTRNP46939 3433 aa22.21■■□□□ 1.15
GCDH-213ENST00000590627 PRIM1P49642 420 aaKnown RBP22.2■■□□□ 1.14
GCDH-213ENST00000590627 SYTL4Q96C24 671 aaPredicted RBP22.2■■□□□ 1.14
GCDH-213ENST00000590627 COL3A1P02461 1466 aaPredicted RBP22.2■■□□□ 1.14
GCDH-213ENST00000590627 LY75O60449 1722 aa22.2■■□□□ 1.14
GCDH-213ENST00000590627 PPM1GO15355 546 aaPredicted RBP22.19■■□□□ 1.14
GCDH-213ENST00000590627 NBPF6Q5VWK0 638 aa22.19■■□□□ 1.14
GCDH-213ENST00000590627 NBPF4Q96M43 638 aa22.19■■□□□ 1.14
GCDH-213ENST00000590627 PNISRQ8TF01 805 aaKnown RBP22.17■■□□□ 1.14
GCDH-213ENST00000590627 RAPGEF4Q8WZA2 1011 aa22.17■■□□□ 1.14
GCDH-213ENST00000590627 HSP90AB2PQ58FF8 381 aa22.16■■□□□ 1.14
GCDH-213ENST00000590627 COL24A1Q17RW2 1714 aa22.16■■□□□ 1.14
GCDH-213ENST00000590627 PNPLA7Q6ZV29 1317 aa22.15■■□□□ 1.14
GCDH-213ENST00000590627 DIAPH1O60610 1272 aaKnown RBP22.15■■□□□ 1.14
GCDH-213ENST00000590627 TUBGCP6Q96RT7 1819 aa22.14■■□□□ 1.13
GCDH-213ENST00000590627 TATP17735 454 aaPredicted RBP22.13■■□□□ 1.13
GCDH-213ENST00000590627 IL13P35225 146 aa22.13■■□□□ 1.13
GCDH-213ENST00000590627 TFCP2L1Q9NZI6 479 aa22.13■■□□□ 1.13
GCDH-213ENST00000590627 POLD1P28340 1107 aa22.12■■□□□ 1.13
GCDH-213ENST00000590627 USHBP1Q8N6Y0 703 aa22.12■■□□□ 1.13
GCDH-213ENST00000590627 CCNL1Q9UK58 526 aaPredicted RBP22.12■■□□□ 1.13
GCDH-213ENST00000590627 CHD4Q14839 1912 aa22.12■■□□□ 1.13
GCDH-213ENST00000590627 KCNQ4P56696 695 aa22.11■■□□□ 1.13
GCDH-213ENST00000590627 EIF4A2Q14240 407 aaKnown RBP22.11■■□□□ 1.13
GCDH-213ENST00000590627 NUDCQ9Y266 331 aa22.11■■□□□ 1.13
GCDH-213ENST00000590627 PCDH11XQ9BZA7 1347 aa22.1■■□□□ 1.13
GCDH-213ENST00000590627 PCDH11YQ9BZA8 1340 aa22.1■■□□□ 1.13
GCDH-213ENST00000590627 HMGB2P26583 209 aaKnown RBP22.1■■□□□ 1.13
GCDH-213ENST00000590627 WDR43Q15061 677 aaKnown RBP eCLIP22.07■■□□□ 1.12
GCDH-213ENST00000590627 ZNF784Q8NCA9 323 aaPredicted RBP22.06■■□□□ 1.12
GCDH-213ENST00000590627 ADAMTS8Q9UP79 889 aa22.05■■□□□ 1.12
GCDH-213ENST00000590627 PKD1L3Q7Z443 1732 aa22.05■■□□□ 1.12
GCDH-213ENST00000590627 NCAPD2Q15021 1401 aa22.05■■□□□ 1.12
GCDH-213ENST00000590627 C5P01031 1676 aa22.04■■□□□ 1.12
GCDH-213ENST00000590627 FAM9BQ8IZU0 186 aa22.04■■□□□ 1.12
GCDH-213ENST00000590627 U2SURPO15042 1029 aaKnown RBP22.03■■□□□ 1.12
GCDH-213ENST00000590627 CYP27B1O15528 508 aa22.03■■□□□ 1.12
GCDH-213ENST00000590627 U2AF1L5P0DN76 240 aaPredicted RBP22.03■■□□□ 1.12
GCDH-213ENST00000590627 U2AF1Q01081 240 aaKnown RBP eCLIP22.03■■□□□ 1.12
GCDH-213ENST00000590627 GPR162Q16538 588 aa22.03■■□□□ 1.12
GCDH-213ENST00000590627 EYA1Q99502 592 aa22.03■■□□□ 1.12
GCDH-213ENST00000590627 IGSF1Q8N6C5 1336 aa22.03■■□□□ 1.12
GCDH-213ENST00000590627 COL23A1Q86Y22 540 aaPredicted RBP22.02■■□□□ 1.12
GCDH-213ENST00000590627 KLHL34Q8N239 644 aa22.02■■□□□ 1.12
GCDH-213ENST00000590627 TAF1LQ8IZX4 1826 aa22.01■■□□□ 1.11
GCDH-213ENST00000590627 PALLDQ8WX93 1383 aa22.01■■□□□ 1.11
GCDH-213ENST00000590627 TOGARAM1Q9Y4F4 1720 aa22.01■■□□□ 1.11
GCDH-213ENST00000590627 MPRIPQ6WCQ1 1025 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms