RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 ITSN1Q15811 1721 aa9.51□□□□□ -0.89
DNMT1-222ENST00000590619 AMIGO3Q86WK7 504 aa9.51□□□□□ -0.89
DNMT1-222ENST00000590619 ERBB3P21860 1342 aa9.51□□□□□ -0.89
DNMT1-222ENST00000590619 TTC21BQ7Z4L5 1316 aa9.51□□□□□ -0.89
DNMT1-222ENST00000590619 WNK3Q9BYP7 1800 aa9.5□□□□□ -0.89
DNMT1-222ENST00000590619 FAM161AQ3B820 660 aa9.5□□□□□ -0.89
DNMT1-222ENST00000590619 C9orf131Q5VYM1 1079 aa9.5□□□□□ -0.89
DNMT1-222ENST00000590619 ANKRD24Q8TF21 1146 aa9.5□□□□□ -0.89
DNMT1-222ENST00000590619 STAC3Q96MF2 364 aa9.5□□□□□ -0.89
DNMT1-222ENST00000590619 BCS1LQ9Y276 419 aa9.5□□□□□ -0.89
DNMT1-222ENST00000590619 ABCC6O95255 1503 aa9.5□□□□□ -0.89
DNMT1-222ENST00000590619 NSD2O96028 1365 aa9.5□□□□□ -0.89
DNMT1-222ENST00000590619 ANKRD36BQ8N2N9 1353 aa9.5□□□□□ -0.89
DNMT1-222ENST00000590619 A0A0G2JLW4 131 aa9.49□□□□□ -0.89
DNMT1-222ENST00000590619 SMC1BQ8NDV3 1235 aa9.49□□□□□ -0.89
DNMT1-222ENST00000590619 ZNF692Q9BU19 519 aaPredicted RBP9.49□□□□□ -0.89
DNMT1-222ENST00000590619 TUBGCP6Q96RT7 1819 aa9.49□□□□□ -0.89
DNMT1-222ENST00000590619 TRPM1Q7Z4N2 1603 aa9.49□□□□□ -0.89
DNMT1-222ENST00000590619 RGPD5Q99666 1765 aa9.48□□□□□ -0.89
DNMT1-222ENST00000590619 TGFB2P61812 414 aa9.47□□□□□ -0.89
DNMT1-222ENST00000590619 NBPF1Q3BBV0 1214 aa9.47□□□□□ -0.89
DNMT1-222ENST00000590619 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.46□□□□□ -0.9
DNMT1-222ENST00000590619 FOXN1O15353 648 aa9.46□□□□□ -0.9
DNMT1-222ENST00000590619 PRDM10Q9NQV6 1147 aa9.46□□□□□ -0.9
DNMT1-222ENST00000590619 KDM2BQ8NHM5 1336 aa9.46□□□□□ -0.9
DNMT1-222ENST00000590619 USP47Q96K76 1375 aa9.46□□□□□ -0.9
DNMT1-222ENST00000590619 FCHSD2O94868 740 aa9.45□□□□□ -0.9
DNMT1-222ENST00000590619 PHF14O94880 888 aa9.45□□□□□ -0.9
DNMT1-222ENST00000590619 DPEP1P16444 411 aa9.45□□□□□ -0.9
DNMT1-222ENST00000590619 KCNA3P22001 575 aa9.45□□□□□ -0.9
DNMT1-222ENST00000590619 HMGB2P26583 209 aaKnown RBP9.45□□□□□ -0.9
DNMT1-222ENST00000590619 ZCRB1Q8TBF4 217 aaKnown RBP9.45□□□□□ -0.9
DNMT1-222ENST00000590619 TTC21AQ8NDW8 1320 aa9.44□□□□□ -0.9
DNMT1-222ENST00000590619 KCPQ6ZWJ8 1503 aa9.44□□□□□ -0.9
DNMT1-222ENST00000590619 CICQ96RK0 1608 aaPredicted RBP9.43□□□□□ -0.9
DNMT1-222ENST00000590619 MMP10P09238 476 aa9.43□□□□□ -0.9
DNMT1-222ENST00000590619 RGS19P49795 217 aa9.43□□□□□ -0.9
DNMT1-222ENST00000590619 MLLT1Q03111 559 aaPredicted RBP9.43□□□□□ -0.9
DNMT1-222ENST00000590619 LTV1Q96GA3 475 aaPredicted RBP9.43□□□□□ -0.9
DNMT1-222ENST00000590619 ABHD8Q96I13 439 aa9.43□□□□□ -0.9
DNMT1-222ENST00000590619 AK7Q96M32 723 aa9.43□□□□□ -0.9
DNMT1-222ENST00000590619 PIK3C2AO00443 1686 aa9.42□□□□□ -0.9
DNMT1-222ENST00000590619 NFAT5O94916 1531 aa9.42□□□□□ -0.9
DNMT1-222ENST00000590619 PXDNLA1KZ92 1463 aa9.42□□□□□ -0.9
DNMT1-222ENST00000590619 C10orf71Q711Q0 1435 aa9.42□□□□□ -0.9
DNMT1-222ENST00000590619 CENPJQ9HC77 1338 aaPredicted RBP9.42□□□□□ -0.9
DNMT1-222ENST00000590619 RNF181Q9P0P0 153 aa9.42□□□□□ -0.9
DNMT1-222ENST00000590619 MKRN1Q9UHC7 482 aaKnown RBP9.42□□□□□ -0.9
DNMT1-222ENST00000590619 LY75O60449 1722 aa9.42□□□□□ -0.9
DNMT1-222ENST00000590619 VEGFAP15692 232 aaPredicted RBP9.41□□□□□ -0.9
DNMT1-222ENST00000590619 SSFA2P28290 1259 aa9.41□□□□□ -0.9
DNMT1-222ENST00000590619 MPRIPQ6WCQ1 1025 aa9.41□□□□□ -0.9
DNMT1-222ENST00000590619 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.41□□□□□ -0.9
DNMT1-222ENST00000590619 IP6K1Q92551 441 aa9.41□□□□□ -0.9
DNMT1-222ENST00000590619 PLEKHG2Q9H7P9 1386 aa9.4□□□□□ -0.9
DNMT1-222ENST00000590619 CTCFP49711 727 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-222ENST00000590619 LBX1P52954 281 aa9.4□□□□□ -0.9
DNMT1-222ENST00000590619 NME9Q86XW9 330 aa9.4□□□□□ -0.9
DNMT1-222ENST00000590619 DCAF5Q96JK2 942 aa9.4□□□□□ -0.9
DNMT1-222ENST00000590619 USP31Q70CQ4 1352 aa9.39□□□□□ -0.91
DNMT1-222ENST00000590619 PALLDQ8WX93 1383 aa9.39□□□□□ -0.91
DNMT1-222ENST00000590619 POTECB2RU33 542 aa9.39□□□□□ -0.91
DNMT1-222ENST00000590619 LINC00116Q8NCU8 138 aa9.39□□□□□ -0.91
DNMT1-222ENST00000590619 PIM2Q9P1W9 311 aa9.39□□□□□ -0.91
DNMT1-222ENST00000590619 EVC2Q86UK5 1308 aa9.38□□□□□ -0.91
DNMT1-222ENST00000590619 GLTPD2A6NH11 291 aa9.38□□□□□ -0.91
DNMT1-222ENST00000590619 TMF1P82094 1093 aa9.38□□□□□ -0.91
DNMT1-222ENST00000590619 NLGN1Q8N2Q7 840 aa9.38□□□□□ -0.91
DNMT1-222ENST00000590619 CREBZFQ9NS37 354 aa9.38□□□□□ -0.91
DNMT1-222ENST00000590619 KTN1Q86UP2 1357 aaKnown RBP9.37□□□□□ -0.91
DNMT1-222ENST00000590619 CCDC85CA6NKD9 419 aa9.37□□□□□ -0.91
DNMT1-222ENST00000590619 DALRD3Q5D0E6 543 aaKnown RBP9.37□□□□□ -0.91
DNMT1-222ENST00000590619 PIGBQ92521 554 aa9.37□□□□□ -0.91
DNMT1-222ENST00000590619 SMARCC1Q92922 1105 aaPredicted RBP9.37□□□□□ -0.91
DNMT1-222ENST00000590619 WBP1LQ9NX94 342 aa9.37□□□□□ -0.91
DNMT1-222ENST00000590619 LOC102724428A0A0B4J2F2 783 aa9.36□□□□□ -0.91
DNMT1-222ENST00000590619 GNPATO15228 680 aa9.36□□□□□ -0.91
DNMT1-222ENST00000590619 FBLN1P23142 703 aa9.36□□□□□ -0.91
DNMT1-222ENST00000590619 SIK1P57059 783 aa9.36□□□□□ -0.91
DNMT1-222ENST00000590619 ITPK1Q13572 414 aa9.36□□□□□ -0.91
DNMT1-222ENST00000590619 TRAPPC3LQ5T215 181 aa9.36□□□□□ -0.91
DNMT1-222ENST00000590619 AIDAQ96BJ3 306 aa9.36□□□□□ -0.91
DNMT1-222ENST00000590619 CCDC87Q9NVE4 849 aa9.36□□□□□ -0.91
DNMT1-222ENST00000590619 VEGFBP49765 207 aa9.35□□□□□ -0.91
DNMT1-222ENST00000590619 NBPF6Q5VWK0 638 aa9.35□□□□□ -0.91
DNMT1-222ENST00000590619 NBPF4Q96M43 638 aa9.35□□□□□ -0.91
DNMT1-222ENST00000590619 USP54Q70EL1 1684 aa9.35□□□□□ -0.91
DNMT1-222ENST00000590619 HSPA8P11142 646 aaKnown RBP9.34□□□□□ -0.91
DNMT1-222ENST00000590619 ARHGEF1Q92888 912 aaKnown RBP9.34□□□□□ -0.91
DNMT1-222ENST00000590619 PARP3Q9Y6F1 533 aa9.34□□□□□ -0.91
DNMT1-222ENST00000590619 N4BP2Q86UW6 1770 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-222ENST00000590619 CNTNAP1P78357 1384 aa9.34□□□□□ -0.91
DNMT1-222ENST00000590619 NSD3Q9BZ95 1437 aa9.33□□□□□ -0.92
DNMT1-222ENST00000590619 CYP27B1O15528 508 aa9.33□□□□□ -0.92
DNMT1-222ENST00000590619 GYS1P13807 737 aa9.33□□□□□ -0.92
DNMT1-222ENST00000590619 CHRNA5P30532 468 aa9.33□□□□□ -0.92
DNMT1-222ENST00000590619 HOXC9P31274 260 aa9.33□□□□□ -0.92
DNMT1-222ENST00000590619 ATP6V1AP38606 617 aa9.33□□□□□ -0.92
DNMT1-222ENST00000590619 RASSF7Q02833 373 aa9.33□□□□□ -0.92
DNMT1-222ENST00000590619 C4BP0C0L5 1744 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms