RNA–Protein interactions for RNA: ENST00000590520.5

GHDC-211, Transcript of GH3 domain containing, humanhuman

TSL 3

Gene GHDC, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-211ENST00000590520 TONSLQ96HA7 1378 aa21.34■■□□□ 1.01
GHDC-211ENST00000590520 MAP3K19Q56UN5 1328 aa21.33■■□□□ 1.01
GHDC-211ENST00000590520 KLHL34Q8N239 644 aa21.33■■□□□ 1.01
GHDC-211ENST00000590520 SYTL4Q96C24 671 aaPredicted RBP21.33■■□□□ 1.01
GHDC-211ENST00000590520 COG3Q96JB2 828 aa21.33■■□□□ 1.01
GHDC-211ENST00000590520 TFCP2L1Q9NZI6 479 aa21.32■■□□□ 1
GHDC-211ENST00000590520 SENP3-EIF4A1A0A087X0R7 540 aa21.31■■□□□ 1
GHDC-211ENST00000590520 HOXC9P31274 260 aa21.31■■□□□ 1
GHDC-211ENST00000590520 C1QTNF8P60827 252 aa21.31■■□□□ 1
GHDC-211ENST00000590520 AMPHP49418 695 aa21.3■■□□□ 1
GHDC-211ENST00000590520 PRIM1P49642 420 aaKnown RBP21.3■■□□□ 1
GHDC-211ENST00000590520 C5P01031 1676 aa21.29■■□□□ 1
GHDC-211ENST00000590520 ZCRB1Q8TBF4 217 aaKnown RBP21.28■■□□□ 1
GHDC-211ENST00000590520 SMG6Q86US8 1419 aaKnown RBP21.28■■□□□ 1
GHDC-211ENST00000590520 KCNQ4P56696 695 aa21.27■■□□□ 1
GHDC-211ENST00000590520 PELP1Q8IZL8 1130 aaKnown RBP21.27■■□□□ 1
GHDC-211ENST00000590520 TESK2Q96S53 571 aa21.27■■□□□ 1
GHDC-211ENST00000590520 CCNL1Q9UK58 526 aaPredicted RBP21.27■■□□□ 1
GHDC-211ENST00000590520 KIF20BQ96Q89 1820 aa21.27■□□□□ 0.99
GHDC-211ENST00000590520 CGNL1Q0VF96 1302 aa21.26■□□□□ 0.99
GHDC-211ENST00000590520 USP47Q96K76 1375 aa21.25■□□□□ 0.99
GHDC-211ENST00000590520 NLGN2Q8NFZ4 835 aa21.25■□□□□ 0.99
GHDC-211ENST00000590520 TAF1LQ8IZX4 1826 aa21.25■□□□□ 0.99
GHDC-211ENST00000590520 SLC24A1O60721 1099 aa21.24■□□□□ 0.99
GHDC-211ENST00000590520 GIGYF1O75420 1035 aaPredicted RBP21.24■□□□□ 0.99
GHDC-211ENST00000590520 ST20-MTHFSA0A0A6YYL1 179 aa21.22■□□□□ 0.99
GHDC-211ENST00000590520 FBLN1P23142 703 aa21.22■□□□□ 0.99
GHDC-211ENST00000590520 MSH5O43196 834 aa21.2■□□□□ 0.98
GHDC-211ENST00000590520 RRS1Q15050 365 aaKnown RBP21.2■□□□□ 0.98
GHDC-211ENST00000590520 NBPF6Q5VWK0 638 aa21.2■□□□□ 0.98
GHDC-211ENST00000590520 RAPGEF4Q8WZA2 1011 aa21.2■□□□□ 0.98
GHDC-211ENST00000590520 NBPF4Q96M43 638 aa21.2■□□□□ 0.98
GHDC-211ENST00000590520 TOGARAM1Q9Y4F4 1720 aa21.2■□□□□ 0.98
GHDC-211ENST00000590520 CEP350Q5VT06 3117 aa21.2■□□□□ 0.98
GHDC-211ENST00000590520 PKD1L3Q7Z443 1732 aa21.19■□□□□ 0.98
GHDC-211ENST00000590520 GRIN3BO60391 1043 aa21.19■□□□□ 0.98
GHDC-211ENST00000590520 COL23A1Q86Y22 540 aaPredicted RBP21.19■□□□□ 0.98
GHDC-211ENST00000590520 USHBP1Q8N6Y0 703 aa21.19■□□□□ 0.98
GHDC-211ENST00000590520 PCDH11XQ9BZA7 1347 aa21.19■□□□□ 0.98
GHDC-211ENST00000590520 PCDH11YQ9BZA8 1340 aa21.19■□□□□ 0.98
GHDC-211ENST00000590520 ITGB4P16144 1822 aa21.18■□□□□ 0.98
GHDC-211ENST00000590520 TATP17735 454 aaPredicted RBP21.18■□□□□ 0.98
GHDC-211ENST00000590520 YBX3P16989 372 aaKnown RBP eCLIP21.17■□□□□ 0.98
GHDC-211ENST00000590520 HMGB2P26583 209 aaKnown RBP21.17■□□□□ 0.98
GHDC-211ENST00000590520 INSRP06213 1382 aa21.17■□□□□ 0.98
GHDC-211ENST00000590520 FLT4P35916 1363 aa21.17■□□□□ 0.98
GHDC-211ENST00000590520 KIF24Q5T7B8 1368 aa21.17■□□□□ 0.98
GHDC-211ENST00000590520 PALLDQ8WX93 1383 aa21.17■□□□□ 0.98
GHDC-211ENST00000590520 C4BP0C0L5 1744 aa21.17■□□□□ 0.98
GHDC-211ENST00000590520 MSL1Q68DK7 614 aa21.16■□□□□ 0.98
GHDC-211ENST00000590520 GGNBP2Q9H3C7 697 aa21.16■□□□□ 0.98
GHDC-211ENST00000590520 FYB1O15117 783 aa21.15■□□□□ 0.98
GHDC-211ENST00000590520 UBR3Q6ZT12 1888 aa21.15■□□□□ 0.98
GHDC-211ENST00000590520 FLAD1Q8NFF5 587 aa21.14■□□□□ 0.97
GHDC-211ENST00000590520 ANKRD26Q9UPS8 1709 aa21.13■□□□□ 0.97
GHDC-211ENST00000590520 TMF1P82094 1093 aa21.13■□□□□ 0.97
GHDC-211ENST00000590520 NSD3Q9BZ95 1437 aa21.12■□□□□ 0.97
GHDC-211ENST00000590520 ATP10DQ9P241 1426 aa21.12■□□□□ 0.97
GHDC-211ENST00000590520 CD2APQ9Y5K6 639 aa21.12■□□□□ 0.97
GHDC-211ENST00000590520 HSP90AB2PQ58FF8 381 aa21.11■□□□□ 0.97
GHDC-211ENST00000590520 NCAPD2Q15021 1401 aa21.1■□□□□ 0.97
GHDC-211ENST00000590520 MAP2P11137 1827 aaKnown RBP21.09■□□□□ 0.97
GHDC-211ENST00000590520 MPRIPQ6WCQ1 1025 aa21.09■□□□□ 0.97
GHDC-211ENST00000590520 SMARCC1Q92922 1105 aaPredicted RBP21.09■□□□□ 0.97
GHDC-211ENST00000590520 CYP27B1O15528 508 aa21.08■□□□□ 0.97
GHDC-211ENST00000590520 AK7Q96M32 723 aa21.08■□□□□ 0.97
GHDC-211ENST00000590520 ADCY9O60503 1353 aa21.08■□□□□ 0.96
GHDC-211ENST00000590520 CDCA8Q53HL2 280 aa21.07■□□□□ 0.96
GHDC-211ENST00000590520 EMILIN1Q9Y6C2 1016 aa21.03■□□□□ 0.96
GHDC-211ENST00000590520 PHF14O94880 888 aa21.02■□□□□ 0.96
GHDC-211ENST00000590520 AMIGO3Q86WK7 504 aa21.02■□□□□ 0.96
GHDC-211ENST00000590520 GPBP1L1Q9HC44 474 aaPredicted RBP21.02■□□□□ 0.96
GHDC-211ENST00000590520 IGSF1Q8N6C5 1336 aa21.02■□□□□ 0.95
GHDC-211ENST00000590520 CICQ96RK0 1608 aaPredicted RBP21.01■□□□□ 0.95
GHDC-211ENST00000590520 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.01■□□□□ 0.95
GHDC-211ENST00000590520 SSFA2P28290 1259 aa21.01■□□□□ 0.95
GHDC-211ENST00000590520 NKX1-1Q15270 411 aaPredicted RBP21.01■□□□□ 0.95
GHDC-211ENST00000590520 PIGBQ92521 554 aa21.01■□□□□ 0.95
GHDC-211ENST00000590520 SPG7Q9UQ90 795 aa21■□□□□ 0.95
GHDC-211ENST00000590520 LOC102724428A0A0B4J2F2 783 aa20.99■□□□□ 0.95
GHDC-211ENST00000590520 SIK1P57059 783 aa20.99■□□□□ 0.95
GHDC-211ENST00000590520 KIF13BQ9NQT8 1826 aa20.99■□□□□ 0.95
GHDC-211ENST00000590520 CARD14Q9BXL6 1004 aa20.98■□□□□ 0.95
GHDC-211ENST00000590520 LINC00116Q8NCU8 138 aa20.97■□□□□ 0.95
GHDC-211ENST00000590520 TMOD3Q9NYL9 352 aa20.97■□□□□ 0.95
GHDC-211ENST00000590520 PLEKHG2Q9H7P9 1386 aa20.97■□□□□ 0.95
GHDC-211ENST00000590520 PPM1GO15355 546 aaPredicted RBP20.96■□□□□ 0.95
GHDC-211ENST00000590520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.96■□□□□ 0.95
GHDC-211ENST00000590520 WASHC2AQ641Q2 1341 aa20.96■□□□□ 0.95
GHDC-211ENST00000590520 ZNF831Q5JPB2 1677 aa20.96■□□□□ 0.95
GHDC-211ENST00000590520 KIAA1551Q9HCM1 1747 aa20.95■□□□□ 0.94
GHDC-211ENST00000590520 IFFO2Q5TF58 517 aa20.95■□□□□ 0.94
GHDC-211ENST00000590520 ZNF526Q8TF50 670 aaPredicted RBP20.95■□□□□ 0.94
GHDC-211ENST00000590520 GNPATO15228 680 aa20.94■□□□□ 0.94
GHDC-211ENST00000590520 SMIM5Q71RC9 77 aa20.94■□□□□ 0.94
GHDC-211ENST00000590520 EYA1Q99502 592 aa20.94■□□□□ 0.94
GHDC-211ENST00000590520 WWC3Q9ULE0 1092 aa20.94■□□□□ 0.94
GHDC-211ENST00000590520 COL5A3P25940 1745 aaPredicted RBP20.93■□□□□ 0.94
GHDC-211ENST00000590520 PHKG2P15735 406 aa20.93■□□□□ 0.94
GHDC-211ENST00000590520 KDRP35968 1356 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms