RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 GDPD2Q9HCC8 539 aa19.26■□□□□ 0.67
MBD1-222ENST00000590208 KNDC1Q76NI1 1749 aa19.26■□□□□ 0.67
MBD1-222ENST00000590208 MINK1Q8N4C8 1332 aaPredicted RBP19.26■□□□□ 0.67
MBD1-222ENST00000590208 NEK4P51957 841 aa19.25■□□□□ 0.67
MBD1-222ENST00000590208 GGT6Q6P531 493 aa19.25■□□□□ 0.67
MBD1-222ENST00000590208 TMX3Q96JJ7 454 aa19.25■□□□□ 0.67
MBD1-222ENST00000590208 NFE2L2Q16236 605 aa19.25■□□□□ 0.67
MBD1-222ENST00000590208 CCDC94Q9BW85 323 aaPredicted RBP19.25■□□□□ 0.67
MBD1-222ENST00000590208 TSPY26PQ9H489 355 aa19.25■□□□□ 0.67
MBD1-222ENST00000590208 PNPLA6Q8IY17 1366 aa19.25■□□□□ 0.67
MBD1-222ENST00000590208 MBD3O95983 291 aa19.24■□□□□ 0.67
MBD1-222ENST00000590208 GNAI1P63096 354 aa19.24■□□□□ 0.67
MBD1-222ENST00000590208 NPATQ14207 1427 aa19.24■□□□□ 0.67
MBD1-222ENST00000590208 TPRNQ4KMQ1 711 aa19.23■□□□□ 0.67
MBD1-222ENST00000590208 CASC1Q6TDU7 716 aa19.23■□□□□ 0.67
MBD1-222ENST00000590208 ZNF710Q8N1W2 664 aa19.23■□□□□ 0.67
MBD1-222ENST00000590208 MYRIPQ8NFW9 859 aa19.23■□□□□ 0.67
MBD1-222ENST00000590208 API5Q9BZZ5 524 aaKnown RBP19.23■□□□□ 0.67
MBD1-222ENST00000590208 TERF2IPQ9NYB0 399 aa19.23■□□□□ 0.67
MBD1-222ENST00000590208 KIF13AQ9H1H9 1805 aa19.23■□□□□ 0.67
MBD1-222ENST00000590208 REREQ9P2R6 1566 aa19.23■□□□□ 0.67
MBD1-222ENST00000590208 FAM135BQ49AJ0 1406 aa19.23■□□□□ 0.67
MBD1-222ENST00000590208 ARHGEF28Q8N1W1 1705 aaKnown RBP19.22■□□□□ 0.67
MBD1-222ENST00000590208 FAM83GA6ND36 823 aa19.22■□□□□ 0.67
MBD1-222ENST00000590208 GADD45BO75293 160 aaPredicted RBP19.22■□□□□ 0.67
MBD1-222ENST00000590208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.22■□□□□ 0.67
MBD1-222ENST00000590208 CFAP44Q96MT7 982 aa19.22■□□□□ 0.67
MBD1-222ENST00000590208 REC8O95072 547 aa19.22■□□□□ 0.67
MBD1-222ENST00000590208 IFT57Q9NWB7 429 aa19.22■□□□□ 0.67
MBD1-222ENST00000590208 BRD1O95696 1058 aa19.21■□□□□ 0.67
MBD1-222ENST00000590208 DCTN1Q14203 1278 aa19.21■□□□□ 0.67
MBD1-222ENST00000590208 ZNF853P0CG23 659 aa19.21■□□□□ 0.67
MBD1-222ENST00000590208 ZSCAN20P17040 1043 aaPredicted RBP19.21■□□□□ 0.67
MBD1-222ENST00000590208 ANKRD44Q8N8A2 993 aa19.21■□□□□ 0.67
MBD1-222ENST00000590208 TTC12Q9H892 705 aaPredicted RBP19.21■□□□□ 0.67
MBD1-222ENST00000590208 POLKQ9UBT6 870 aa19.21■□□□□ 0.67
MBD1-222ENST00000590208 ERC2O15083 957 aa19.21■□□□□ 0.67
MBD1-222ENST00000590208 KRT24Q2M2I5 525 aa19.21■□□□□ 0.67
MBD1-222ENST00000590208 USP25Q9UHP3 1055 aa19.2■□□□□ 0.66
MBD1-222ENST00000590208 CBX1P83916 185 aa19.2■□□□□ 0.66
MBD1-222ENST00000590208 CEP85Q6P2H3 762 aa19.2■□□□□ 0.66
MBD1-222ENST00000590208 CAMSAP1Q5T5Y3 1602 aa19.19■□□□□ 0.66
MBD1-222ENST00000590208 CD163L1Q9NR16 1453 aa19.19■□□□□ 0.66
MBD1-222ENST00000590208 ATP10DQ9P241 1426 aa19.19■□□□□ 0.66
MBD1-222ENST00000590208 TSHZ3Q63HK5 1081 aa19.19■□□□□ 0.66
MBD1-222ENST00000590208 RPGRIP1LQ68CZ1 1315 aa19.19■□□□□ 0.66
MBD1-222ENST00000590208 A0A0U1RQG5 324 aaPredicted RBP19.18■□□□□ 0.66
MBD1-222ENST00000590208 NOLC1Q14978 699 aaKnown RBP eCLIP19.18■□□□□ 0.66
MBD1-222ENST00000590208 VGFO15240 615 aaPredicted RBP19.18■□□□□ 0.66
MBD1-222ENST00000590208 DMTNQ08495 405 aa19.18■□□□□ 0.66
MBD1-222ENST00000590208 CABP1Q9NZU7 370 aa19.18■□□□□ 0.66
MBD1-222ENST00000590208 PALD1Q9ULE6 856 aa19.18■□□□□ 0.66
MBD1-222ENST00000590208 PIBF1Q8WXW3 757 aa19.17■□□□□ 0.66
MBD1-222ENST00000590208 PRAM1Q96QH2 718 aa19.17■□□□□ 0.66
MBD1-222ENST00000590208 MEIS3Q99687 375 aa19.17■□□□□ 0.66
MBD1-222ENST00000590208 EMILIN1Q9Y6C2 1016 aa19.17■□□□□ 0.66
MBD1-222ENST00000590208 PLEKHG5O94827 1062 aa19.16■□□□□ 0.66
MBD1-222ENST00000590208 HDGFL2Q7Z4V5 671 aaPredicted RBP19.15■□□□□ 0.66
MBD1-222ENST00000590208 USP48Q86UV5 1035 aa19.15■□□□□ 0.66
MBD1-222ENST00000590208 ATP2B3Q16720 1220 aa19.15■□□□□ 0.66
MBD1-222ENST00000590208 RPAP2Q8IXW5 612 aaPredicted RBP19.15■□□□□ 0.66
MBD1-222ENST00000590208 ARAP3Q8WWN8 1544 aa19.15■□□□□ 0.66
MBD1-222ENST00000590208 ADCY5O95622 1261 aa19.14■□□□□ 0.65
MBD1-222ENST00000590208 SYAP1Q96A49 352 aaPredicted RBP19.14■□□□□ 0.65
MBD1-222ENST00000590208 PPP4R3BQ5MIZ7 849 aa19.14■□□□□ 0.65
MBD1-222ENST00000590208 PRIMPOLQ96LW4 560 aa19.14■□□□□ 0.65
MBD1-222ENST00000590208 UPF3BQ9BZI7 483 aaKnown RBP19.14■□□□□ 0.65
MBD1-222ENST00000590208 LMTK2Q8IWU2 1503 aa19.13■□□□□ 0.65
MBD1-222ENST00000590208 CUL4AQ13619 759 aa19.13■□□□□ 0.65
MBD1-222ENST00000590208 MSH6P52701 1360 aa19.13■□□□□ 0.65
MBD1-222ENST00000590208 HCLS1P14317 486 aaPredicted RBP19.12■□□□□ 0.65
MBD1-222ENST00000590208 PDE1AP54750 535 aa19.12■□□□□ 0.65
MBD1-222ENST00000590208 RTL1A6NKG5 1358 aa19.12■□□□□ 0.65
MBD1-222ENST00000590208 YEATS2Q9ULM3 1422 aa19.12■□□□□ 0.65
MBD1-222ENST00000590208 UTP14CQ5TAP6 766 aaKnown RBP19.12■□□□□ 0.65
MBD1-222ENST00000590208 ANKRD26Q9UPS8 1709 aa19.12■□□□□ 0.65
MBD1-222ENST00000590208 HMGN5P82970 282 aaKnown RBP19.11■□□□□ 0.65
MBD1-222ENST00000590208 PLCB2Q00722 1185 aa19.11■□□□□ 0.65
MBD1-222ENST00000590208 CDK19Q9BWU1 502 aa19.11■□□□□ 0.65
MBD1-222ENST00000590208 TCHHQ07283 1943 aa19.11■□□□□ 0.65
MBD1-222ENST00000590208 KIF3AQ9Y496 699 aa19.11■□□□□ 0.65
MBD1-222ENST00000590208 KIDINS220Q9ULH0 1771 aa19.11■□□□□ 0.65
MBD1-222ENST00000590208 SPDYE4A6NLX3 237 aa19.11■□□□□ 0.65
MBD1-222ENST00000590208 ZFYVE9O95405 1425 aa19.1■□□□□ 0.65
MBD1-222ENST00000590208 IL13P35225 146 aa19.1■□□□□ 0.65
MBD1-222ENST00000590208 GTF2F1P35269 517 aaKnown RBP eCLIP19.1■□□□□ 0.651e-8■■■□□ 15.2
MBD1-222ENST00000590208 BCL2L12Q9HB09 334 aa19.1■□□□□ 0.65
MBD1-222ENST00000590208 ARHGEF40Q8TER5 1519 aa19.1■□□□□ 0.65
MBD1-222ENST00000590208 KIF24Q5T7B8 1368 aa19.1■□□□□ 0.65
MBD1-222ENST00000590208 ANO2Q9NQ90 1003 aa19.1■□□□□ 0.65
MBD1-222ENST00000590208 RGS12O14924 1447 aa19.1■□□□□ 0.65
MBD1-222ENST00000590208 CDC42BPGQ6DT37 1551 aa19.09■□□□□ 0.65
MBD1-222ENST00000590208 ABCC3O15438 1527 aa19.09■□□□□ 0.65
MBD1-222ENST00000590208 PHF14O94880 888 aa19.09■□□□□ 0.65
MBD1-222ENST00000590208 ESYT1Q9BSJ8 1104 aa19.09■□□□□ 0.65
MBD1-222ENST00000590208 ZRANB1Q9UGI0 708 aa19.09■□□□□ 0.65
MBD1-222ENST00000590208 FKBP5Q13451 457 aaPredicted RBP19.08■□□□□ 0.65
MBD1-222ENST00000590208 RIMS2Q9UQ26 1411 aa19.08■□□□□ 0.65
MBD1-222ENST00000590208 MCM2P49736 904 aa19.08■□□□□ 0.64
MBD1-222ENST00000590208 EXOC6BQ9Y2D4 811 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms