RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 POLKQ9UBT6 870 aa28.33■■■□□ 2.13
CIRBP-226ENST00000590171 KIF7Q2M1P5 1343 aa28.33■■■□□ 2.13
CIRBP-226ENST00000590171 TXNRD1Q16881 649 aa28.32■■■□□ 2.12
CIRBP-226ENST00000590171 RAPGEF4Q8WZA2 1011 aa28.32■■■□□ 2.12
CIRBP-226ENST00000590171 ANO8Q9HCE9 1232 aaPredicted RBP28.32■■■□□ 2.12
CIRBP-226ENST00000590171 WASHC2AQ641Q2 1341 aa28.32■■■□□ 2.12
CIRBP-226ENST00000590171 TNNT2P45379 298 aaPredicted RBP28.31■■■□□ 2.12
CIRBP-226ENST00000590171 NSD2O96028 1365 aa28.3■■■□□ 2.12
CIRBP-226ENST00000590171 TATP17735 454 aaPredicted RBP28.29■■■□□ 2.12
CIRBP-226ENST00000590171 NCAPD2Q15021 1401 aa28.28■■■□□ 2.12
CIRBP-226ENST00000590171 BTAF1O14981 1849 aa28.28■■■□□ 2.12
CIRBP-226ENST00000590171 MAP2P11137 1827 aaKnown RBP28.28■■■□□ 2.12
CIRBP-226ENST00000590171 DOT1LQ8TEK3 1739 aa28.26■■■□□ 2.11
CIRBP-226ENST00000590171 KNSTRNQ9Y448 316 aa28.24■■■□□ 2.11
CIRBP-226ENST00000590171 EYA1Q99502 592 aa28.23■■■□□ 2.11
CIRBP-226ENST00000590171 PRIM1P49642 420 aaKnown RBP28.22■■■□□ 2.11
CIRBP-226ENST00000590171 SYTL4Q96C24 671 aaPredicted RBP28.22■■■□□ 2.11
CIRBP-226ENST00000590171 PCDH11XQ9BZA7 1347 aa28.21■■■□□ 2.11
CIRBP-226ENST00000590171 PCDH11YQ9BZA8 1340 aa28.21■■■□□ 2.11
CIRBP-226ENST00000590171 EIF4A2Q14240 407 aaKnown RBP28.21■■■□□ 2.11
CIRBP-226ENST00000590171 MORC1Q86VD1 984 aa28.21■■■□□ 2.11
CIRBP-226ENST00000590171 STK32BQ9NY57 414 aa28.19■■■□□ 2.1
CIRBP-226ENST00000590171 PAPPAQ13219 1627 aa28.18■■■□□ 2.1
CIRBP-226ENST00000590171 PKD1L3Q7Z443 1732 aa28.18■■■□□ 2.1
CIRBP-226ENST00000590171 AMER1Q5JTC6 1135 aaPredicted RBP28.18■■■□□ 2.1
CIRBP-226ENST00000590171 CASZ1Q86V15 1759 aa28.17■■■□□ 2.1
CIRBP-226ENST00000590171 CYP27B1O15528 508 aa28.17■■■□□ 2.1
CIRBP-226ENST00000590171 SLC15A2Q16348 729 aa28.17■■■□□ 2.1
CIRBP-226ENST00000590171 PDGFDQ9GZP0 370 aaPredicted RBP28.16■■■□□ 2.1
CIRBP-226ENST00000590171 LRRC4BQ9NT99 713 aa28.16■■■□□ 2.1
CIRBP-226ENST00000590171 PER1O15534 1290 aaPredicted RBP28.13■■■□□ 2.09
CIRBP-226ENST00000590171 SPON1Q9HCB6 807 aa28.13■■■□□ 2.09
CIRBP-226ENST00000590171 KAT6BQ8WYB5 2073 aa28.13■■■□□ 2.09
CIRBP-226ENST00000590171 IGSF1Q8N6C5 1336 aa28.13■■■□□ 2.09
CIRBP-226ENST00000590171 SLC27A3Q5K4L6 730 aa28.11■■■□□ 2.09
CIRBP-226ENST00000590171 SPG7Q9UQ90 795 aa28.11■■■□□ 2.09
CIRBP-226ENST00000590171 ZNF827Q17R98 1081 aa28.1■■■□□ 2.09
CIRBP-226ENST00000590171 TOGARAM1Q9Y4F4 1720 aa28.09■■■□□ 2.09
CIRBP-226ENST00000590171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.09■■■□□ 2.094e-13■□□□□ 8.8
CIRBP-226ENST00000590171 KCNQ4P56696 695 aa28.08■■■□□ 2.09
CIRBP-226ENST00000590171 LY75O60449 1722 aa28.08■■■□□ 2.09
CIRBP-226ENST00000590171 NKX1-1Q15270 411 aaPredicted RBP28.07■■■□□ 2.08
CIRBP-226ENST00000590171 ZBTB7AO95365 584 aa28.06■■■□□ 2.08
CIRBP-226ENST00000590171 AKT1S1Q96B36 256 aa28.05■■■□□ 2.08
CIRBP-226ENST00000590171 PLEKHG2Q9H7P9 1386 aa28.05■■■□□ 2.08
CIRBP-226ENST00000590171 CC2D1BQ5T0F9 858 aaKnown RBP28.04■■■□□ 2.08
CIRBP-226ENST00000590171 MPRIPQ6WCQ1 1025 aa28.04■■■□□ 2.08
CIRBP-226ENST00000590171 PHKG2P15735 406 aa28.03■■■□□ 2.08
CIRBP-226ENST00000590171 CCNL1Q9UK58 526 aaPredicted RBP28.03■■■□□ 2.08
CIRBP-226ENST00000590171 IFNL2Q8IZJ0 200 aa28.02■■■□□ 2.08
CIRBP-226ENST00000590171 AEBP1Q8IUX7 1158 aa28.01■■■□□ 2.07
CIRBP-226ENST00000590171 PPP1R1BQ9UD71 204 aaPredicted RBP28.01■■■□□ 2.07
CIRBP-226ENST00000590171 PALLDQ8WX93 1383 aa28■■■□□ 2.07
CIRBP-226ENST00000590171 IL13P35225 146 aa28■■■□□ 2.07
CIRBP-226ENST00000590171 ATF5Q9Y2D1 282 aaPredicted RBP28■■■□□ 2.07
CIRBP-226ENST00000590171 NPC1L1Q9UHC9 1359 aa27.99■■■□□ 2.07
CIRBP-226ENST00000590171 PTGER2P43116 358 aa27.99■■■□□ 2.07
CIRBP-226ENST00000590171 MTHFSP49914 203 aa27.99■■■□□ 2.07
CIRBP-226ENST00000590171 MTFR1LQ9H019 292 aa27.99■■■□□ 2.07
CIRBP-226ENST00000590171 ITGB4P16144 1822 aa27.99■■■□□ 2.07
CIRBP-226ENST00000590171 PIGBQ92521 554 aa27.98■■■□□ 2.07
CIRBP-226ENST00000590171 PNPLA7Q6ZV29 1317 aa27.96■■■□□ 2.07
CIRBP-226ENST00000590171 SULT6B1Q6IMI4 303 aa27.96■■■□□ 2.07
CIRBP-226ENST00000590171 KDRP35968 1356 aa27.96■■■□□ 2.07
CIRBP-226ENST00000590171 QSER1Q2KHR3 1735 aa27.95■■■□□ 2.07
CIRBP-226ENST00000590171 CNGB1Q14028 1251 aaPredicted RBP27.95■■■□□ 2.06
CIRBP-226ENST00000590171 PLEKHO1Q53GL0 409 aaPredicted RBP27.95■■■□□ 2.06
CIRBP-226ENST00000590171 SMARCC1Q92922 1105 aaPredicted RBP27.94■■■□□ 2.06
CIRBP-226ENST00000590171 TFCP2L1Q9NZI6 479 aa27.94■■■□□ 2.06
CIRBP-226ENST00000590171 TUBGCP6Q96RT7 1819 aa27.93■■■□□ 2.06
CIRBP-226ENST00000590171 SGIP1Q9BQI5 828 aa27.93■■■□□ 2.06
CIRBP-226ENST00000590171 TMOD3Q9NYL9 352 aa27.93■■■□□ 2.06
CIRBP-226ENST00000590171 AMOTQ4VCS5 1084 aa27.92■■■□□ 2.06
CIRBP-226ENST00000590171 C5P01031 1676 aa27.91■■■□□ 2.06
CIRBP-226ENST00000590171 ZNF530Q6P9A1 599 aaPredicted RBP27.91■■■□□ 2.06
CIRBP-226ENST00000590171 DCAF5Q96JK2 942 aa27.89■■■□□ 2.06
CIRBP-226ENST00000590171 KDM6AO15550 1401 aaPredicted RBP27.89■■■□□ 2.06
CIRBP-226ENST00000590171 HSP90AB1P08238 724 aaKnown RBP27.88■■■□□ 2.05
CIRBP-226ENST00000590171 SLC16A10Q8TF71 515 aa27.88■■■□□ 2.05
CIRBP-226ENST00000590171 ASAP1Q9ULH1 1129 aa27.88■■■□□ 2.05
CIRBP-226ENST00000590171 COL3A1P02461 1466 aaPredicted RBP27.87■■■□□ 2.05
CIRBP-226ENST00000590171 DIAPH1O60610 1272 aaKnown RBP27.86■■■□□ 2.05
CIRBP-226ENST00000590171 TAF1LQ8IZX4 1826 aa27.85■■■□□ 2.05
CIRBP-226ENST00000590171 ERVV-2B6SEH9 535 aa27.85■■■□□ 2.05
CIRBP-226ENST00000590171 HMOX1P09601 288 aa27.85■■■□□ 2.05
CIRBP-226ENST00000590171 ATG3Q9NT62 314 aa27.85■■■□□ 2.05
CIRBP-226ENST00000590171 LOC102724428A0A0B4J2F2 783 aa27.84■■■□□ 2.05
CIRBP-226ENST00000590171 SIK1P57059 783 aa27.84■■■□□ 2.05
CIRBP-226ENST00000590171 C1orf141Q5JVX7 400 aa27.84■■■□□ 2.05
CIRBP-226ENST00000590171 C4BP0C0L5 1744 aa27.84■■■□□ 2.05
CIRBP-226ENST00000590171 COL23A1Q86Y22 540 aaPredicted RBP27.83■■■□□ 2.05
CIRBP-226ENST00000590171 HMGB2P26583 209 aaKnown RBP27.82■■■□□ 2.04
CIRBP-226ENST00000590171 ARXQ96QS3 562 aa27.82■■■□□ 2.04
CIRBP-226ENST00000590171 FHDC1Q9C0D6 1143 aaPredicted RBP27.82■■■□□ 2.04
CIRBP-226ENST00000590171 COL24A1Q17RW2 1714 aa27.81■■■□□ 2.04
CIRBP-226ENST00000590171 MSH5O43196 834 aa27.79■■■□□ 2.04
CIRBP-226ENST00000590171 CABP4P57796 275 aa27.79■■■□□ 2.04
CIRBP-226ENST00000590171 ITPK1Q13572 414 aa27.79■■■□□ 2.04
CIRBP-226ENST00000590171 LINC00116Q8NCU8 138 aa27.79■■■□□ 2.04
CIRBP-226ENST00000590171 AK7Q96M32 723 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms