RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-226	ENST00000590171	POLK	Q9UBT6	870 aa		28.33	■■■□□ 2.13
CIRBP-226	ENST00000590171	KIF7	Q2M1P5	1343 aa		28.33	■■■□□ 2.13
CIRBP-226	ENST00000590171	TXNRD1	Q16881	649 aa		28.32	■■■□□ 2.12
CIRBP-226	ENST00000590171	RAPGEF4	Q8WZA2	1011 aa		28.32	■■■□□ 2.12
CIRBP-226	ENST00000590171	ANO8	Q9HCE9	1232 aa	Predicted RBP	28.32	■■■□□ 2.12
CIRBP-226	ENST00000590171	WASHC2A	Q641Q2	1341 aa		28.32	■■■□□ 2.12
CIRBP-226	ENST00000590171	TNNT2	P45379	298 aa	Predicted RBP	28.31	■■■□□ 2.12
CIRBP-226	ENST00000590171	NSD2	O96028	1365 aa		28.3	■■■□□ 2.12
CIRBP-226	ENST00000590171	TAT	P17735	454 aa	Predicted RBP	28.29	■■■□□ 2.12
CIRBP-226	ENST00000590171	NCAPD2	Q15021	1401 aa		28.28	■■■□□ 2.12
CIRBP-226	ENST00000590171	BTAF1	O14981	1849 aa		28.28	■■■□□ 2.12
CIRBP-226	ENST00000590171	MAP2	P11137	1827 aa	Known RBP	28.28	■■■□□ 2.12
CIRBP-226	ENST00000590171	DOT1L	Q8TEK3	1739 aa		28.26	■■■□□ 2.11
CIRBP-226	ENST00000590171	KNSTRN	Q9Y448	316 aa		28.24	■■■□□ 2.11
CIRBP-226	ENST00000590171	EYA1	Q99502	592 aa		28.23	■■■□□ 2.11
CIRBP-226	ENST00000590171	PRIM1	P49642	420 aa	Known RBP	28.22	■■■□□ 2.11
CIRBP-226	ENST00000590171	SYTL4	Q96C24	671 aa	Predicted RBP	28.22	■■■□□ 2.11
CIRBP-226	ENST00000590171	PCDH11X	Q9BZA7	1347 aa		28.21	■■■□□ 2.11
CIRBP-226	ENST00000590171	PCDH11Y	Q9BZA8	1340 aa		28.21	■■■□□ 2.11
CIRBP-226	ENST00000590171	EIF4A2	Q14240	407 aa	Known RBP	28.21	■■■□□ 2.11
CIRBP-226	ENST00000590171	MORC1	Q86VD1	984 aa		28.21	■■■□□ 2.11
CIRBP-226	ENST00000590171	STK32B	Q9NY57	414 aa		28.19	■■■□□ 2.1
CIRBP-226	ENST00000590171	PAPPA	Q13219	1627 aa		28.18	■■■□□ 2.1
CIRBP-226	ENST00000590171	PKD1L3	Q7Z443	1732 aa		28.18	■■■□□ 2.1
CIRBP-226	ENST00000590171	AMER1	Q5JTC6	1135 aa	Predicted RBP	28.18	■■■□□ 2.1
CIRBP-226	ENST00000590171	CASZ1	Q86V15	1759 aa		28.17	■■■□□ 2.1
CIRBP-226	ENST00000590171	CYP27B1	O15528	508 aa		28.17	■■■□□ 2.1
CIRBP-226	ENST00000590171	SLC15A2	Q16348	729 aa		28.17	■■■□□ 2.1
CIRBP-226	ENST00000590171	PDGFD	Q9GZP0	370 aa	Predicted RBP	28.16	■■■□□ 2.1
CIRBP-226	ENST00000590171	LRRC4B	Q9NT99	713 aa		28.16	■■■□□ 2.1
CIRBP-226	ENST00000590171	PER1	O15534	1290 aa	Predicted RBP	28.13	■■■□□ 2.09
CIRBP-226	ENST00000590171	SPON1	Q9HCB6	807 aa		28.13	■■■□□ 2.09
CIRBP-226	ENST00000590171	KAT6B	Q8WYB5	2073 aa		28.13	■■■□□ 2.09
CIRBP-226	ENST00000590171	IGSF1	Q8N6C5	1336 aa		28.13	■■■□□ 2.09
CIRBP-226	ENST00000590171	SLC27A3	Q5K4L6	730 aa		28.11	■■■□□ 2.09
CIRBP-226	ENST00000590171	SPG7	Q9UQ90	795 aa		28.11	■■■□□ 2.09
CIRBP-226	ENST00000590171	ZNF827	Q17R98	1081 aa		28.1	■■■□□ 2.09
CIRBP-226	ENST00000590171	TOGARAM1	Q9Y4F4	1720 aa		28.09	■■■□□ 2.09
CIRBP-226	ENST00000590171	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	28.09	■■■□□ 2.09	4e-13	■□□□□ 8.8
CIRBP-226	ENST00000590171	KCNQ4	P56696	695 aa		28.08	■■■□□ 2.09
CIRBP-226	ENST00000590171	LY75	O60449	1722 aa		28.08	■■■□□ 2.09
CIRBP-226	ENST00000590171	NKX1-1	Q15270	411 aa	Predicted RBP	28.07	■■■□□ 2.08
CIRBP-226	ENST00000590171	ZBTB7A	O95365	584 aa		28.06	■■■□□ 2.08
CIRBP-226	ENST00000590171	AKT1S1	Q96B36	256 aa		28.05	■■■□□ 2.08
CIRBP-226	ENST00000590171	PLEKHG2	Q9H7P9	1386 aa		28.05	■■■□□ 2.08
CIRBP-226	ENST00000590171	CC2D1B	Q5T0F9	858 aa	Known RBP	28.04	■■■□□ 2.08
CIRBP-226	ENST00000590171	MPRIP	Q6WCQ1	1025 aa		28.04	■■■□□ 2.08
CIRBP-226	ENST00000590171	PHKG2	P15735	406 aa		28.03	■■■□□ 2.08
CIRBP-226	ENST00000590171	CCNL1	Q9UK58	526 aa	Predicted RBP	28.03	■■■□□ 2.08
CIRBP-226	ENST00000590171	IFNL2	Q8IZJ0	200 aa		28.02	■■■□□ 2.08
CIRBP-226	ENST00000590171	AEBP1	Q8IUX7	1158 aa		28.01	■■■□□ 2.07
CIRBP-226	ENST00000590171	PPP1R1B	Q9UD71	204 aa	Predicted RBP	28.01	■■■□□ 2.07
CIRBP-226	ENST00000590171	PALLD	Q8WX93	1383 aa		28	■■■□□ 2.07
CIRBP-226	ENST00000590171	IL13	P35225	146 aa		28	■■■□□ 2.07
CIRBP-226	ENST00000590171	ATF5	Q9Y2D1	282 aa	Predicted RBP	28	■■■□□ 2.07
CIRBP-226	ENST00000590171	NPC1L1	Q9UHC9	1359 aa		27.99	■■■□□ 2.07
CIRBP-226	ENST00000590171	PTGER2	P43116	358 aa		27.99	■■■□□ 2.07
CIRBP-226	ENST00000590171	MTHFS	P49914	203 aa		27.99	■■■□□ 2.07
CIRBP-226	ENST00000590171	MTFR1L	Q9H019	292 aa		27.99	■■■□□ 2.07
CIRBP-226	ENST00000590171	ITGB4	P16144	1822 aa		27.99	■■■□□ 2.07
CIRBP-226	ENST00000590171	PIGB	Q92521	554 aa		27.98	■■■□□ 2.07
CIRBP-226	ENST00000590171	PNPLA7	Q6ZV29	1317 aa		27.96	■■■□□ 2.07
CIRBP-226	ENST00000590171	SULT6B1	Q6IMI4	303 aa		27.96	■■■□□ 2.07
CIRBP-226	ENST00000590171	KDR	P35968	1356 aa		27.96	■■■□□ 2.07
CIRBP-226	ENST00000590171	QSER1	Q2KHR3	1735 aa		27.95	■■■□□ 2.07
CIRBP-226	ENST00000590171	CNGB1	Q14028	1251 aa	Predicted RBP	27.95	■■■□□ 2.06
CIRBP-226	ENST00000590171	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.95	■■■□□ 2.06
CIRBP-226	ENST00000590171	SMARCC1	Q92922	1105 aa	Predicted RBP	27.94	■■■□□ 2.06
CIRBP-226	ENST00000590171	TFCP2L1	Q9NZI6	479 aa		27.94	■■■□□ 2.06
CIRBP-226	ENST00000590171	TUBGCP6	Q96RT7	1819 aa		27.93	■■■□□ 2.06
CIRBP-226	ENST00000590171	SGIP1	Q9BQI5	828 aa		27.93	■■■□□ 2.06
CIRBP-226	ENST00000590171	TMOD3	Q9NYL9	352 aa		27.93	■■■□□ 2.06
CIRBP-226	ENST00000590171	AMOT	Q4VCS5	1084 aa		27.92	■■■□□ 2.06
CIRBP-226	ENST00000590171	C5	P01031	1676 aa		27.91	■■■□□ 2.06
CIRBP-226	ENST00000590171	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.91	■■■□□ 2.06
CIRBP-226	ENST00000590171	DCAF5	Q96JK2	942 aa		27.89	■■■□□ 2.06
CIRBP-226	ENST00000590171	KDM6A	O15550	1401 aa	Predicted RBP	27.89	■■■□□ 2.06
CIRBP-226	ENST00000590171	HSP90AB1	P08238	724 aa	Known RBP	27.88	■■■□□ 2.05
CIRBP-226	ENST00000590171	SLC16A10	Q8TF71	515 aa		27.88	■■■□□ 2.05
CIRBP-226	ENST00000590171	ASAP1	Q9ULH1	1129 aa		27.88	■■■□□ 2.05
CIRBP-226	ENST00000590171	COL3A1	P02461	1466 aa	Predicted RBP	27.87	■■■□□ 2.05
CIRBP-226	ENST00000590171	DIAPH1	O60610	1272 aa	Known RBP	27.86	■■■□□ 2.05
CIRBP-226	ENST00000590171	TAF1L	Q8IZX4	1826 aa		27.85	■■■□□ 2.05
CIRBP-226	ENST00000590171	ERVV-2	B6SEH9	535 aa		27.85	■■■□□ 2.05
CIRBP-226	ENST00000590171	HMOX1	P09601	288 aa		27.85	■■■□□ 2.05
CIRBP-226	ENST00000590171	ATG3	Q9NT62	314 aa		27.85	■■■□□ 2.05
CIRBP-226	ENST00000590171	LOC102724428	A0A0B4J2F2	783 aa		27.84	■■■□□ 2.05
CIRBP-226	ENST00000590171	SIK1	P57059	783 aa		27.84	■■■□□ 2.05
CIRBP-226	ENST00000590171	C1orf141	Q5JVX7	400 aa		27.84	■■■□□ 2.05
CIRBP-226	ENST00000590171	C4B	P0C0L5	1744 aa		27.84	■■■□□ 2.05
CIRBP-226	ENST00000590171	COL23A1	Q86Y22	540 aa	Predicted RBP	27.83	■■■□□ 2.05
CIRBP-226	ENST00000590171	HMGB2	P26583	209 aa	Known RBP	27.82	■■■□□ 2.04
CIRBP-226	ENST00000590171	ARX	Q96QS3	562 aa		27.82	■■■□□ 2.04
CIRBP-226	ENST00000590171	FHDC1	Q9C0D6	1143 aa	Predicted RBP	27.82	■■■□□ 2.04
CIRBP-226	ENST00000590171	COL24A1	Q17RW2	1714 aa		27.81	■■■□□ 2.04
CIRBP-226	ENST00000590171	MSH5	O43196	834 aa		27.79	■■■□□ 2.04
CIRBP-226	ENST00000590171	CABP4	P57796	275 aa		27.79	■■■□□ 2.04
CIRBP-226	ENST00000590171	ITPK1	Q13572	414 aa		27.79	■■■□□ 2.04
CIRBP-226	ENST00000590171	LINC00116	Q8NCU8	138 aa		27.79	■■■□□ 2.04
CIRBP-226	ENST00000590171	AK7	Q96M32	723 aa		27.79	■■■□□ 2.04

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