RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 A0A0G2JS52 829 aa12.65□□□□□ -0.38
HMGN1P31-201ENST00000590085 PPP2R1AP30153 589 aa12.65□□□□□ -0.38
HMGN1P31-201ENST00000590085 MYT1Q01538 1121 aa12.65□□□□□ -0.38
HMGN1P31-201ENST00000590085 KRT27Q7Z3Y8 459 aa12.65□□□□□ -0.38
HMGN1P31-201ENST00000590085 USHBP1Q8N6Y0 703 aa12.65□□□□□ -0.38
HMGN1P31-201ENST00000590085 KDRP35968 1356 aa12.65□□□□□ -0.38
HMGN1P31-201ENST00000590085 PLEKHG2Q9H7P9 1386 aa12.65□□□□□ -0.38
HMGN1P31-201ENST00000590085 DLG5Q8TDM6 1919 aa12.64□□□□□ -0.39
HMGN1P31-201ENST00000590085 SCN11AQ9UI33 1791 aa12.64□□□□□ -0.39
HMGN1P31-201ENST00000590085 IL2RBP14784 551 aa12.64□□□□□ -0.39
HMGN1P31-201ENST00000590085 EYA1Q99502 592 aa12.64□□□□□ -0.39
HMGN1P31-201ENST00000590085 IL13P35225 146 aa12.63□□□□□ -0.39
HMGN1P31-201ENST00000590085 RREB1Q92766 1687 aa12.63□□□□□ -0.39
HMGN1P31-201ENST00000590085 BCL9O00512 1426 aa12.62□□□□□ -0.39
HMGN1P31-201ENST00000590085 ADAMTS7Q9UKP4 1686 aa12.62□□□□□ -0.39
HMGN1P31-201ENST00000590085 SOCS7O14512 581 aa12.62□□□□□ -0.39
HMGN1P31-201ENST00000590085 RALBP1Q15311 655 aa12.62□□□□□ -0.39
HMGN1P31-201ENST00000590085 DDB1Q16531 1140 aa12.62□□□□□ -0.39
HMGN1P31-201ENST00000590085 NPM3O75607 178 aaKnown RBP12.61□□□□□ -0.39
HMGN1P31-201ENST00000590085 DIAPH1O60610 1272 aaKnown RBP12.6□□□□□ -0.39
HMGN1P31-201ENST00000590085 PDE3BQ13370 1112 aa12.6□□□□□ -0.39
HMGN1P31-201ENST00000590085 PRKRIP1Q9H875 184 aaPredicted RBP12.6□□□□□ -0.39
HMGN1P31-201ENST00000590085 MYBBP1AQ9BQG0 1328 aaKnown RBP12.6□□□□□ -0.39
HMGN1P31-201ENST00000590085 LY75O60449 1722 aa12.59□□□□□ -0.39
HMGN1P31-201ENST00000590085 SIPA1L3O60292 1781 aaPredicted RBP12.59□□□□□ -0.39
HMGN1P31-201ENST00000590085 FAM182BQ5T319 152 aa12.59□□□□□ -0.39
HMGN1P31-201ENST00000590085 AEBP1Q8IUX7 1158 aa12.59□□□□□ -0.39
HMGN1P31-201ENST00000590085 MARCH10Q8NA82 808 aaPredicted RBP12.59□□□□□ -0.39
HMGN1P31-201ENST00000590085 RAPGEF4Q8WZA2 1011 aa12.59□□□□□ -0.39
HMGN1P31-201ENST00000590085 NUP188Q5SRE5 1749 aa12.59□□□□□ -0.39
HMGN1P31-201ENST00000590085 EXOC5O00471 708 aa12.58□□□□□ -0.4
HMGN1P31-201ENST00000590085 TATP17735 454 aaPredicted RBP12.58□□□□□ -0.4
HMGN1P31-201ENST00000590085 UPF1Q92900 1129 aaKnown RBP eCLIP12.58□□□□□ -0.4
HMGN1P31-201ENST00000590085 CFAP53Q96M91 514 aa12.58□□□□□ -0.4
HMGN1P31-201ENST00000590085 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
HMGN1P31-201ENST00000590085 KCNA4P22459 653 aa12.57□□□□□ -0.4
HMGN1P31-201ENST00000590085 ZCRB1Q8TBF4 217 aaKnown RBP12.57□□□□□ -0.4
HMGN1P31-201ENST00000590085 SULT6B1Q6IMI4 303 aa12.56□□□□□ -0.4
HMGN1P31-201ENST00000590085 FAM196AQ6ZSG2 479 aa12.56□□□□□ -0.4
HMGN1P31-201ENST00000590085 PCDH11XQ9BZA7 1347 aa12.56□□□□□ -0.4
HMGN1P31-201ENST00000590085 PCDH11YQ9BZA8 1340 aa12.56□□□□□ -0.4
HMGN1P31-201ENST00000590085 PAPPAQ13219 1627 aa12.55□□□□□ -0.4
HMGN1P31-201ENST00000590085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.55□□□□□ -0.4
HMGN1P31-201ENST00000590085 TAF1LQ8IZX4 1826 aa12.55□□□□□ -0.4
HMGN1P31-201ENST00000590085 CYP27B1O15528 508 aa12.54□□□□□ -0.4
HMGN1P31-201ENST00000590085 U2SURPO15042 1029 aaKnown RBP12.53□□□□□ -0.4
HMGN1P31-201ENST00000590085 HMOX1P09601 288 aa12.53□□□□□ -0.4
HMGN1P31-201ENST00000590085 SPG7Q9UQ90 795 aa12.53□□□□□ -0.4
HMGN1P31-201ENST00000590085 MRC1P22897 1456 aa12.53□□□□□ -0.4
HMGN1P31-201ENST00000590085 UBR2Q8IWV8 1755 aa12.52□□□□□ -0.41
HMGN1P31-201ENST00000590085 CCDC125Q86Z20 511 aa12.52□□□□□ -0.41
HMGN1P31-201ENST00000590085 DDX54Q8TDD1 881 aaKnown RBP12.52□□□□□ -0.41
HMGN1P31-201ENST00000590085 NUDCQ9Y266 331 aa12.52□□□□□ -0.41
HMGN1P31-201ENST00000590085 KDM6AO15550 1401 aaPredicted RBP12.52□□□□□ -0.41
HMGN1P31-201ENST00000590085 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
HMGN1P31-201ENST00000590085 C5P01031 1676 aa12.51□□□□□ -0.41
HMGN1P31-201ENST00000590085 ZNF831Q5JPB2 1677 aa12.51□□□□□ -0.41
HMGN1P31-201ENST00000590085 TUBGCP6Q96RT7 1819 aa12.51□□□□□ -0.41
HMGN1P31-201ENST00000590085 TRIM37O94972 964 aa12.51□□□□□ -0.41
HMGN1P31-201ENST00000590085 RSPH6AQ9H0K4 717 aa12.51□□□□□ -0.41
HMGN1P31-201ENST00000590085 PHKG2P15735 406 aa12.5□□□□□ -0.41
HMGN1P31-201ENST00000590085 NKX1-1Q15270 411 aaPredicted RBP12.5□□□□□ -0.41
HMGN1P31-201ENST00000590085 AMOTQ4VCS5 1084 aa12.5□□□□□ -0.41
HMGN1P31-201ENST00000590085 PTF1AQ7RTS3 328 aa12.5□□□□□ -0.41
HMGN1P31-201ENST00000590085 COL5A3P25940 1745 aaPredicted RBP12.5□□□□□ -0.41
HMGN1P31-201ENST00000590085 QSER1Q2KHR3 1735 aa12.5□□□□□ -0.41
HMGN1P31-201ENST00000590085 ANP32CO43423 234 aa12.49□□□□□ -0.41
HMGN1P31-201ENST00000590085 U2AF1L5P0DN76 240 aaPredicted RBP12.49□□□□□ -0.41
HMGN1P31-201ENST00000590085 U2AF1Q01081 240 aaKnown RBP eCLIP12.49□□□□□ -0.41
HMGN1P31-201ENST00000590085 PLEKHO1Q53GL0 409 aaPredicted RBP12.49□□□□□ -0.41
HMGN1P31-201ENST00000590085 ZNF530Q6P9A1 599 aaPredicted RBP12.49□□□□□ -0.41
HMGN1P31-201ENST00000590085 BCL11BQ9C0K0 894 aaPredicted RBP12.49□□□□□ -0.41
HMGN1P31-201ENST00000590085 KCNQ2O43526 872 aa12.48□□□□□ -0.41
HMGN1P31-201ENST00000590085 FCHSD2O94868 740 aa12.48□□□□□ -0.41
HMGN1P31-201ENST00000590085 PRKAR2BP31323 418 aa12.48□□□□□ -0.41
HMGN1P31-201ENST00000590085 IFNL2Q8IZJ0 200 aa12.48□□□□□ -0.41
HMGN1P31-201ENST00000590085 KDM3BQ7LBC6 1761 aa12.48□□□□□ -0.41
HMGN1P31-201ENST00000590085 ACSBG1Q96GR2 724 aa12.47□□□□□ -0.41
HMGN1P31-201ENST00000590085 TJP1Q07157 1748 aa12.47□□□□□ -0.41
HMGN1P31-201ENST00000590085 MAP3K5Q99683 1374 aa12.46□□□□□ -0.41
HMGN1P31-201ENST00000590085 SF3B2Q13435 895 aaKnown RBP12.46□□□□□ -0.41
HMGN1P31-201ENST00000590085 MTHFSDQ2M296 383 aaKnown RBP12.46□□□□□ -0.41
HMGN1P31-201ENST00000590085 CCDC184Q52MB2 194 aa12.46□□□□□ -0.41
HMGN1P31-201ENST00000590085 PHACTR3Q96KR7 559 aa12.46□□□□□ -0.41
HMGN1P31-201ENST00000590085 HSP90AB1P08238 724 aaKnown RBP12.45□□□□□ -0.42
HMGN1P31-201ENST00000590085 BAG6P46379 1132 aa12.45□□□□□ -0.42
HMGN1P31-201ENST00000590085 PRIM1P49642 420 aaKnown RBP12.45□□□□□ -0.42
HMGN1P31-201ENST00000590085 AKAP4Q5JQC9 854 aa12.45□□□□□ -0.42
HMGN1P31-201ENST00000590085 C1orf141Q5JVX7 400 aa12.45□□□□□ -0.42
HMGN1P31-201ENST00000590085 DEFB132Q7Z7B7 95 aa12.45□□□□□ -0.42
HMGN1P31-201ENST00000590085 DCAF5Q96JK2 942 aa12.45□□□□□ -0.42
HMGN1P31-201ENST00000590085 PLEKHF1Q96S99 279 aa12.45□□□□□ -0.42
HMGN1P31-201ENST00000590085 APBA3O96018 575 aa12.44□□□□□ -0.42
HMGN1P31-201ENST00000590085 GAS2L2Q8NHY3 880 aa12.44□□□□□ -0.42
HMGN1P31-201ENST00000590085 CAMKK2Q96RR4 588 aa12.44□□□□□ -0.42
HMGN1P31-201ENST00000590085 UBR3Q6ZT12 1888 aa12.44□□□□□ -0.42
HMGN1P31-201ENST00000590085 PLSCR1O15162 318 aa12.43□□□□□ -0.42
HMGN1P31-201ENST00000590085 EN1Q05925 392 aaPredicted RBP12.43□□□□□ -0.42
HMGN1P31-201ENST00000590085 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
HMGN1P31-201ENST00000590085 CASZ1Q86V15 1759 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms